GEO Browser - GEO

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258 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Non-coding RNA profiling by array	JC polyomavirus
GSE42478	Defining a molecular roadmap of cellular reprogramming into iPS cells	Expression profiling by array Non-coding RNA profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	61	BIGWIG CEL PAIR TXT	Ben S. Wittner	Dec 20, 2012
GSE18155	Malignant Germ Cell Tumors Display Common microRNA Profiles Resulting in Global Changes in Expression of mRNA Targets	Expression profiling by array Non-coding RNA profiling by array Third-party reanalysis	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human immunodeficiency virus 1 JC polyomavirus Lymphocryptovirus Merkel cell polyomavirus Rhadinovirus	94	CEL TXT	Matthew Jonathan Murray	Mar 15, 2010
GSE19248	Performance Evaluation of Commercial miRNA Expression Array Platforms	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Mus musculus Rattus norvegicus human gammaherpesvirus 4 synthetic construct	28	CEL TXT XML	Sachin Sah	Mar 18, 2010
GSE19693	STAR RNA-binding protein, Quaking, suppresses cancer via regulation of microRNA	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	48	CEL TXT	Hailei Zhang	Dec 30, 2009
GSE25320	Characterisation of mRNA and microRNA in human mast cell exosomes and their transfer to other mast cells and blood CD34 progenitor cells	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Mus musculus Rattus norvegicus human gammaherpesvirus 4	11	CEL CHP TXT	Karin Ekström	Apr 16, 2012
GSE26177	Functional evidence that Drosha over-expression in cervical squamous cell carcinoma affects cell phenotype and microRNA profiles	Non-coding RNA profiling by array Expression profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human immunodeficiency virus 1 JC polyomavirus Lymphocryptovirus Merkel cell polyomavirus Rhadinovirus	24	CEL TXT	Matthew Jonathan Murray	May 26, 2011
GSE26396	Specific MicroRNAs Are Preferentially Expressed by Skin Stem Cells To Balance Self-Renewal and Early Lineage Commitment	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	24	CEL CHP TXT	liang zhang	Jan 04, 2011
GSE27951	Gene-chip studies of adipogenesis-regulated microRNAs in mouse primary adipocytes and human obesity	Non-coding RNA profiling by array Expression profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	45	CEL TXT	Iain Gallagher	Jun 10, 2011
GSE32688	Integrative Survival-Based Molecular Profiling of Human Pancreatic Cancer	Expression profiling by array Non-coding RNA profiling by array Genome variation profiling by SNP array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	96	CEL CHP GPR	Linh My Tran	Oct 08, 2011
GSE42334	Effect of cigarette smoke extract, cisplatin, nicotine and/or ionizing radiation on mRNA and microRNA expression in the NCI-H460 human lung large cell carcinoma cell line	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Cytomegalovirus Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human immunodeficiency virus 1 JC polyomavirus Lymphocryptovirus Merkel cell polyomavirus Murid gammaherpesvirus 4 Rhadinovirus	112	CEL TXT	Santosh Kumar Patnaik	Dec 31, 2014
GSE44265	HIV-1 Tat protein promotes neuronal dysfunction through disruption of microRNAs.	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4 synthetic construct	32	CEL GPR TXT	Bassel E Sawaya	Feb 12, 2013
GSE44266	Deregulation of microRNAs by HIV-1 Vpr protein leads to the development of neurocognitive disorders.	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	28	CEL GPR TXT	Bassel E Sawaya	Feb 12, 2013
GSE44843	Involvement of miRNAs in the Differentiation of Human Glioblastoma Multiforme Brain Tumor Stem-Like Cells	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid gammaherpesvirus 4 Mus musculus Mus musculus cytomegalovirus 2 Rattus norvegicus human gammaherpesvirus 4	23	CEL TXT	Raquel Malumbres	Mar 05, 2013
GSE108137	Snail-dependent epithelial splicing regulatory protein 1 (ESRP1) silencing drives malignant transformation of human pulmonary epithelial cells	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	8	CEL	Linh My Tran	Dec 16, 2017
GSE117748	MicroRNA-mediated suppression of the TGF-β pathway confers transmissible and reversible CDK4/6 inhibitor resistance	Expression profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by array Non-coding RNA profiling by high throughput sequencing	Betapolyomavirus hominis Betapolyomavirus macacae Cytomegalovirus Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human immunodeficiency virus 1 JC polyomavirus Lymphocryptovirus Merkel cell polyomavirus Rhadinovirus	75	CEL TXT	Liam Cornell	Mar 04, 2019
GSE21799	Control of oligodendroglial cell number by the miR-17~92 family of miRNA cluster (miRNA Exiqon Part)	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Mus musculus Rattus norvegicus human gammaherpesvirus 4	2	CSV	Gabriela Salinas	Jun 01, 2010
GSE21801	Control of oligodendroglial cell number by the miR-17~92 family of miRNA cluster	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Mus musculus Rattus norvegicus human gammaherpesvirus 4	12	CSV TXT	Gabriela Salinas	Jun 01, 2010
GSE42181	Affect of liver transcriptome by acute acetaminophen exposure [miRNA]	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	10	CSV	Ji-Hoon Cho	May 03, 2013
GSE42182	Affect of liver transcriptome by acute acetaminophen exposure	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	20	CSV TXT	Ji-Hoon Cho	May 03, 2013
GSE52869	miRNA expression signatures in heart tissues of mice simulating posttraumatic stress disorder (PTSD) [Study1]	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid gammaherpesvirus 4 Mus musculus Mus musculus cytomegalovirus 2 Rattus norvegicus human gammaherpesvirus 4	32	CSV	Ji-Hoon Cho	Dec 04, 2013