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Status
Public on Feb 27, 2010
Title
Agilent Candida dubliniensis 12K V.2
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Candida dubliniensis Manufacturer
Agilent
Manufacture protocol
Agilent Sure Print 4x44K Arrayhttp://www.chem.agilent.com/en-US/Products/Instruments/dnamicroarrays/Pages/gp557.aspx
Description
All sequences were derived from the C. dubliniensis genome hosted by the Sanger Institute at http://old.genedb.org/genedb/cdubliniensis/ . You can use the locus tags provided below to search GeneDB at this link. Multiple sequences may be downloaded using the 'List Download' tool. The 'Browse Catalogues' tool will allow you to visualise individual chromosomes.
Submission date
Feb 25, 2010
Last update date
Jun 04, 2014
Contact name
Gary P. Moran
E-mail(s)
gpmoran1@gmail.com Phone
+353-1-612-7245
Organization name
Trinity College Dublin
Department
Dental Science
Lab
Microbiology
Street address
Lincoln Place
City
Dublin
ZIP/Postal code
D2
Country
Ireland
Samples (36)
GSM516125 , GSM516126 , GSM516127 , GSM516128 , GSM516129 , GSM516130
GSM516131 ,
GSM516132 ,
GSM516133 ,
GSM516134 ,
GSM516135 ,
GSM516136 ,
GSM516137 ,
GSM516138 ,
GSM516139 ,
GSM516140 ,
GSM516141 ,
GSM516142 ,
GSM516143 ,
GSM516144 ,
GSM516145 ,
GSM516146 ,
GSM516147 ,
GSM516148 ,
GSM516149 ,
GSM516150 ,
GSM516151 ,
GSM516152 ,
GSM516153 ,
GSM516154 ,
GSM516155 ,
GSM516156 ,
GSM529973 ,
GSM529974 ,
GSM529975 ,
GSM529976 Series (2)
GSE20537 Transcriptional response of Candida dubliniensis during hypha formation and environmental change
GSE21173 Transcriptional profile analysis of Candida dubliniensis chlamydospores compared to yeast cells
Data table header descriptions ID Oligonucleotide ID number
ORF Locus tag
Gene_Name Candida dubliniensis GeneDB gene name
C_albicans_ID C. albicans orthologue
Common Common name
Description Function
SEQUENCE Sequence of oligonucleotide
SPOT_ID
Data table ID ORF Gene_Name C_albicans_ID Common Description SEQUENCE SPOT_ID CUST_2801_PI337320982
Cd36_00010 Cd36_00010
AGAAGCATGCTATGGAGACGTACTTTGAGGTACCCAGGGAAAATGTATGTCGAGAATGTG
CUST_2802_PI337320982
Cd36_00010 Cd36_00010
TGATGAAGTTTGTGAGGTTGTGCAGTATGGACAAGATGATTCAAGCCTATGATGAGAAAC
CUST_5389_PI337320982
Cd36_00020 Cd36_00020
TGTTTATTTGTCAGACGACTACAACCATGGCTCGGTTACTTTGAATCCACAAGACGTTGA
CUST_5390_PI337320982
Cd36_00020 Cd36_00020
GGGTGTCTACAAAATCACAAAGATTGTTCCAAAAGAGATTTCTCAAATTCTCATCAGAGA
CUST_5353_PI337320982
Cd36_00030 Cd36_00030
GCCCCGGATTTGGTTAAAACTTATGTTTCCGCCCATGGTCTTCCAGTTACTTTGAATTAA
CUST_5354_PI337320982
Cd36_00030 Cd36_00030
ATTCTTGTCGATGTTGTTGCTATCGTGGGTCATCGCAAGGTCGGTCGTGGATTTAGATTA
CUST_5323_PI337320982
Cd36_00040 Cd36_00040
GTCCAGTACTGTTTTTAAACGGCTTAGAGATATGACTGGATTGAAATATCAAGAATTGCA
CUST_5324_PI337320982
Cd36_00040 Cd36_00040
GGTTGATAAAATTTGTGTATATTTCTACTCACAAGATGGAAGCAGATCTTCTTACCAAGG
CUST_5291_PI337320982
Cd36_00050 Cd36_00050
TGTTTCCGCGAAGAGCAACAAAAGGTTACGCCGTCATTACTAGATCAACTAGTAGACTAA
CUST_5292_PI337320982
Cd36_00050 Cd36_00050
TCAAACAGAGATTATTCTAAAGTGGTCAATGCTGCTAAAAAAGGCAGCACAAGTCAAGAA
CUST_5261_PI337320982
Cd36_00060 Cd36_00060
GTGGATGTTAGGACGCTCGATGAGATTAAGATAAACCAGAAATTGGAACATCACGATTAA
CUST_5262_PI337320982
Cd36_00060 Cd36_00060
CTAGGGATAATTTAGCCGACTCATTCACAAAAGCTTTAGGAAGAAACCAATTAATTGAAC
CUST_5231_PI337320982
Cd36_00070 Cd36_00070
orf19.6109
TUP1
Transcriptional corepressor that represses filamentous growth and regulates phase switching, required for wild-type germ tube induction; has C-terminal WD40 repeats; farnesol upregulated in biofilm; in repression pathways with Nrg1p, Rfg1p
ATTTTTGCTACTGGTAGTGGCGACTGCAAAGCCAGAATCTGGAAATGGTCGAAAAAATAA
CUST_5232_PI337320982
Cd36_00070 Cd36_00070
orf19.6109
TUP1
Transcriptional corepressor that represses filamentous growth and regulates phase switching, required for wild-type germ tube induction; has C-terminal WD40 repeats; farnesol upregulated in biofilm; in repression pathways with Nrg1p, Rfg1p
TTGCTGTACCCCCGACAACGAATACATCTTATCTGGTTCCAAAGACCGTGGTGTCATTTT
CUST_5203_PI337320982
Cd36_00080 Cd36_00080
ATTGGCTACGGTCCACAACAAACAAACATTTCATTAATCAACGATAAAGGGTTGCCTAAA
CUST_5204_PI337320982
Cd36_00080 Cd36_00080
TCTACAAACATTTTGGTCACGTTCCAGGTTGGAAAACCCACTACAAGGCCGAAACACAAA
CUST_9407_PI337320982
Cd36_00090 Cd36_00090
orf19.6102
Predicted ORF in Assemblies 19, 20 and 21
CTAAAAGCAAGTATAAAAAGCTGTATAGAAGATGGCAACACCGAGAGGTTGAAACAGTTT
CUST_9408_PI337320982
Cd36_00090 Cd36_00090
orf19.6102
Predicted ORF in Assemblies 19, 20 and 21
GCGAGGATTGATGAGTTGGAGTATACAGTGGAATTACTAAAAGCAAGTATAAAAAGCTGT
CUST_1837_PI337320982
Cd36_00100 Cd36_00100
orf19.6103
Predicted ORF in Assemblies 19, 20 and 21
TATTTTGGCAACACCGTCAGACAAAGAGTTTGGTTAAGACTAAGAAGGAAATGCTATCCC
CUST_1838_PI337320982
Cd36_00100 Cd36_00100
orf19.6103
Predicted ORF in Assemblies 19, 20 and 21
GCAAAAAATGGAAGGGGAAATACTATTTTGGCAACACCGTCAGACAAAGAGTTTGGTTAA
12034 2380 Kbytes .Supplementary file Size Download File type/resource GPL10110_C.dub_V.2.gal.gz
3.5 Mb
(ftp) (http) GAL
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