Data table |
ID |
SEQUENCE |
GC% |
Internal Repeat Score |
Self-Annealing Score |
Primary Strain |
Primary Target |
Common Name of Primary Target |
Gene Symbol |
Strain V583 |
Strain OG1RF |
Strain TX0104 |
Strain TX1322 |
Strain ATCC_29200 |
Strain HH22 |
Strain TUSoD_Ef11 |
ORF |
SPOT_ID |
QEF00001_A_1 |
GATTAAAAAAATTAATCAACAGTTAGTAGCTTTGAAGGAGGAAAAACAAATGATTAAAGGGACAGAAATC |
28.57 |
32 |
95 |
TX0104 |
HMPREF0348_0873 |
MerR family transcriptional regulator |
|
EF0966::70::100.0::3.4E-11::+ |
|
HMPREF0348_0873::70::100.0::3.4E-11::+ |
HMPREF0349_2032::70::100.0::3.4E-11::+ |
|
HMPREF0346_2240::70::100.0::3.4E-11::+ |
|
HMPREF0348_0873 |
|
QEF00001_A_10 |
TCTAGTCATTTTGGTAATGGAAATAGTTGTTGATTGGTTGAGTGCATATGTTAGGAGAACGTTATTATGA |
32.86 |
30 |
79 |
TUSoD_Ef11 |
ENTFA0001_0426 |
ABC-type phosphate/phosphonate transport system, permease component |
|
|
|
|
|
|
|
ENTFA0001_0426::70::100.0::3.4E-11::+ |
ENTFA0001_0426 |
|
QEF00001_A_11 |
AACTTGGGAAGCAACAACGGCTATTCTGTTAAAGAAATGTTAGATGCTGCTCGCGAAGTGACAGGCCAAG |
45.71 |
30 |
119 |
TUSoD_Ef11 |
ENTFA0001_0028 |
UDP-glucose 4-epimerase |
|
EF2783::70::97.14286::4.2E-10::+,EF1070::70::95.71428::1.1E-9::+ |
|
HMPREF0348_1287::70::94.28571::1.8E-9::+ |
HMPREF0349_1465::67::98.50746::5.1E-10::+,HMPREF0349_0053::68::95.588234::2.0E-9::+ |
|
HMPREF0346_2723::70::95.71428::1.3E-9::+ |
ENTFA0001_0028::70::100.0::3.6E-11::+,ENTFA0001_0166::70::97.14286::2.3E-10::+ |
ENTFA0001_0028 |
|
QEF00001_A_12 |
ACTACCTATTTATAGCTCTCTGATATTAAATCATGTTGAAATTGCTATTCGAAGTGCAGCTACTTTAGGC |
34.29 |
32 |
97 |
TUSoD_Ef11 |
ENTFA0001_0427 |
phosphonates transport permease |
|
|
|
|
|
|
|
ENTFA0001_0427::70::100.0::3.4E-11::+ |
ENTFA0001_0427 |
|
QEF00001_A_13 |
ATCCATCTCTTTGAAGGAAACGTTCAGGTTTATTATTTTGATATTTCTTTTGAAGAAACGTTGAAAAGAC |
30.0 |
31 |
92 |
TUSoD_Ef11 |
ENTFA0001_0031 |
conserved hypothetical protein |
|
EF1073::70::98.57143::5.2E-11::+ |
|
HMPREF0348_1311::69::95.652176::1.9E-9::+ |
HMPREF0349_1462::67::100.0::9.8E-11::+ |
HMPREF0345_2645::70::97.14286::1.2E-10::+ |
HMPREF0346_0020::70::98.57143::4.8E-11::+ |
ENTFA0001_0031::70::100.0::2.0E-11::+ |
ENTFA0001_0031 |
|
QEF00001_A_14 |
AAGTAAATTATTATAGAACAGACAAACTATTAGCTAAATTAAACATGCAGATAGATAGCTCTGTTTTATA |
24.29 |
34 |
134 |
TUSoD_Ef11 |
ENTFA0001_0428 |
putative 3',5'-cyclic-nucleotide phosphodiesterase |
|
|
|
|
|
|
|
ENTFA0001_0428::70::100.0::4.0E-11::+ |
ENTFA0001_0428 |
|
QEF00001_A_15 |
AAATTTACCACCTGAAGTCATGACAGCTTTTTCAGAATCATTTATTTTTTTAATCAGTAACGATAAAGTT |
27.14 |
31 |
101 |
TX0104 |
HMPREF0348_1312 |
conserved hypothetical protein |
|
EF1074::70::98.57143::9.5E-11::+ |
|
HMPREF0348_1312::70::100.0::3.3E-11::+ |
HMPREF0349_1461::70::100.0::3.4E-11::+ |
HMPREF0345_2644::70::100.0::3.4E-11::+ |
HMPREF0346_0021::70::98.57143::8.4E-11::+ |
ENTFA0001_0032::70::100.0::3.8E-11::+ |
HMPREF0348_1312 |
|
QEF00001_A_16 |
ATTGATTTTATTATTCCAAATGAATCCTCAACAATTTATTCAAGAAAGTGCTAATCATAACGCTTTTTTT |
24.29 |
34 |
93 |
TX0104 |
HMPREF0348_1770 |
deoxyribodipyrimidine photolyase |
phrB |
EF1598::70::100.0::8.8E-11::+ |
|
HMPREF0348_1770::70::100.0::8.8E-11::+ |
HMPREF0349_1004::70::100.0::8.8E-11::+ |
HMPREF0345_2189::70::100.0::8.8E-11::+ |
HMPREF0346_0566::70::100.0::4.2E-11::+ |
ENTFA0001_0437::70::100.0::8.8E-11::+ |
HMPREF0348_1770 |
|
QEF00001_A_17 |
CTTTACAAAAAATAATTTAGTTGTTGTATTTTCAACGTTTATTGTCTTTTTAGCGTTTGACTTGTTTAGA |
24.29 |
35 |
88 |
ATCC_29200 |
HMPREF0345_2640 |
MFS family major facilitator transporter |
|
EF1078::70::100.0::7.3E-11::+ |
|
HMPREF0348_1315::70::98.57143::2.0E-10::+ |
HMPREF0349_1458::70::100.0::7.5E-11::+ |
HMPREF0345_2640::70::100.0::7.5E-11::+ |
HMPREF0346_0025::70::100.0::7.5E-11::+ |
ENTFA0001_0036::70::100.0::7.3E-11::+ |
HMPREF0345_2640 |
|
QEF00001_A_18 |
GGAGAATTTGGACCTGTCCTAATCCAAGACGTTCATTTATTAGAAAAATTAGCTCATTTTAATCGTGAGC |
35.71 |
30 |
101 |
TUSoD_Ef11 |
ENTFA0001_0439 |
vegetative catalase |
|
EF1597::70::98.57143::2.3E-10::+ |
|
HMPREF0348_1769::70::98.57143::2.3E-10::+ |
HMPREF0349_1005::70::98.57143::2.3E-10::+ |
HMPREF0345_2193::70::98.57143::2.3E-10::+ |
HMPREF0346_0563::70::98.57143::2.3E-10::+ |
ENTFA0001_0439::70::100.0::5.0E-11::+ |
ENTFA0001_0439 |
|
QEF00001_A_19 |
ACATCATTTAAAAGGACACCATGGCAAAAAAACAAACGAAAATGGCGGTTTTTTAACAAAGTTATTGGCA |
32.86 |
34 |
84 |
TUSoD_Ef11 |
ENTFA0001_0039 |
conserved hypothetical protein |
|
EF1082::70::97.14286::3.6E-10::+ |
|
HMPREF0348_1318::69::95.652176::1.4E-9::+ |
HMPREF0349_1455::70::98.57143::1.3E-10::+ |
HMPREF0345_2637::70::97.14286::3.3E-10::+ |
HMPREF0346_0029::70::97.14286::3.3E-10::+ |
ENTFA0001_0039::70::100.0::5.5E-11::+ |
ENTFA0001_0039 |
|
QEF00001_A_2 |
AGGATTTCAAATTTTCGAAGTTCAAGATGATTATGTTGTAGCCTTGCCATTTGTAGAGGAGAAACCACTA |
35.71 |
31 |
88 |
TX0104 |
HMPREF0348_2927 |
conserved hypothetical protein |
|
EF2806::70::100.0::2.7E-11::+ |
|
HMPREF0348_2927::70::100.0::2.6E-11::+ |
|
|
|
|
HMPREF0348_2927 |
|
QEF00001_A_20 |
TAGAATTAACAACATTATGTATGATTAGAAATCAGAAAAATGAAATCCTTGTGCAAGAACGACAAAAAAA |
25.71 |
32 |
91 |
TX0104 |
HMPREF0348_1767 |
MutT/nudix family protein |
|
EF1595::70::100.0::2.4E-11::+ |
|
HMPREF0348_1767::70::100.0::2.3E-11::+ |
HMPREF0349_1007::70::100.0::2.3E-11::+ |
HMPREF0345_2195::70::100.0::2.4E-11::+ |
HMPREF0346_0561::70::100.0::2.3E-11::+ |
ENTFA0001_0441::70::100.0::2.4E-11::+ |
HMPREF0348_1767 |
|
QEF00001_A_21 |
CGTTAATTATTAGCGGCTTCATTATCTGGTACAAGCGACGGAAAAAGACGACCAGAAAGCATGGAAATTA |
40.0 |
30 |
101 |
TUSoD_Ef11 |
ENTFA0001_0050 |
sortase family protein |
|
EF1094::60::98.333336::2.9E-8::+ |
|
HMPREF0348_1329::60::98.333336::2.9E-8::+ |
HMPREF0349_1444::60::98.333336::2.9E-8::+ |
HMPREF0345_2625::60::98.333336::2.9E-8::+ |
HMPREF0346_0041::60::98.333336::2.9E-8::+ |
ENTFA0001_0050::70::100.0::4.5E-11::+ |
ENTFA0001_0050 |
|
QEF00001_A_22 |
AAACAGGGGACACTAGAACAGAAGACGTGAAAACGTTACTAACCATGATGAAAAAGACATTGAATAAGTA |
35.71 |
34 |
54 |
TUSoD_Ef11 |
ENTFA0001_0453 |
2-dehydro-3-deoxyphosphogluconate aldolase |
|
EF2975::70::100.0::2.8E-11::+,EF0839::70::98.57143::8.0E-11::+ |
|
HMPREF0348_3068::70::98.57143::8.0E-11::+ |
HMPREF0349_1515::70::100.0::3.2E-11::+,HMPREF0349_1902::70::98.57143::9.1E-11::+ |
|
|
ENTFA0001_0453::70::100.0::5.6E-11::+,ENTFA0001_2268::70::98.57143::1.4E-10::+ |
ENTFA0001_0453 |
|
QEF00001_A_23 |
GATGTCTAAATATGATATCACACAATCTGCCAATACTTTATCATTAGCGGTCCAAAATAAAATGACTGTC |
32.86 |
30 |
75 |
TX0104 |
HMPREF0348_1760 |
NADH oxidase |
nox |
EF1586::70::100.0::8.4E-11::+ |
|
HMPREF0348_1760::70::100.0::8.5E-11::+ |
HMPREF0349_1014::70::100.0::8.5E-11::+ |
HMPREF0345_2202::70::100.0::8.5E-11::+ |
HMPREF0346_0554::70::100.0::8.5E-11::+ |
ENTFA0001_0448::70::100.0::8.4E-11::+ |
HMPREF0348_1760 |
|
QEF00001_A_24 |
GACGAAAAAGAATTACTGGATTATTTAGTTTCCATTGATTTAAATATTCAAGAAGAATATACGATTAAAG |
24.29 |
32 |
105 |
TX0104 |
HMPREF0348_0912 |
metal-dependent transcriptional regulator |
|
EF1005::70::100.0::1.5E-11::+ |
|
HMPREF0348_0912::70::100.0::1.5E-11::+ |
HMPREF0349_2071::70::100.0::1.5E-11::+ |
HMPREF0345_1158::70::100.0::1.5E-11::+ |
HMPREF0346_2278::70::100.0::1.5E-11::+ |
ENTFA0001_0907::70::100.0::1.5E-11::+ |
HMPREF0348_0912 |
|
QEF00001_A_4 |
ACTATCGTTATAAATTTACATTCTGTTTCTTTAGCACGGGAGTATGCCACAAGAATTATTGCTTTAAAAA |
30.0 |
30 |
78 |
TUSoD_Ef11 |
ENTFA0001_0424 |
phosphonate ABC transporter, ATP-binding protein |
phnC |
|
|
|
|
|
|
ENTFA0001_0424::70::100.0::3.3E-11::+ |
ENTFA0001_0424 |
|
QEF00001_A_5 |
TAGTTTTGCAATACTTGTTGTGACCATTATCTTCGGTATCTTAGCGCTTGTCTTAGACAACAAAAATAAC |
34.29 |
30 |
99 |
TUSoD_Ef11 |
ENTFA0001_0007 |
conserved hypothetical protein |
|
EF0723::70::95.71428::1.4E-9::+ |
|
|
|
|
HMPREF0346_2002::70::95.71428::1.5E-9::+ |
ENTFA0001_0007::70::100.0::8.9E-11::+ |
ENTFA0001_0007 |
|
QEF00001_A_7 |
TTGGGTTCGGTTATTGATTTTAATCACAGTAGCCTACGTGTGTTATCGCTTTTTTTCAAAACATATTCAC |
34.29 |
30 |
109 |
TUSoD_Ef11 |
ENTFA0001_0023 |
conserved hypothetical protein |
|
EF0741::70::97.14286::1.5E-10::+ |
|
HMPREF0348_0688::70::95.71428::3.9E-10::+ |
HMPREF0349_1795::70::98.57143::6.0E-11::+ |
HMPREF0345_0898::70::97.14286::1.5E-10::+ |
HMPREF0346_2019::70::97.14286::1.5E-10::+ |
ENTFA0001_0023::70::100.0::2.3E-11::+ |
ENTFA0001_0023 |
|