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Platform GPL10248 Query DataSets for GPL10248
Status Public on Jun 30, 2010
Title Agilent 4x44k Horse Gene Expression microarrays (AMADID 021322)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Equus caballus
Manufacturer Agilent Technologies Inc., Santa Clara, USA
Manufacture protocol see Agilents homepage for SurePrint technology
Support glass slides
 
 
Submission date Mar 24, 2010
Last update date Jan 18, 2013
Contact name Stefan Michael Bauersachs
E-mail(s) stefan.bauersachs@uzh.ch
Organization name University of Zurich
Department Department for Farm Animals
Lab Genetics and Functional Genomics
Street address Eschikon 27 EHB 23.1
City Lindau
State/province Zurich
ZIP/Postal code 8315
Country Switzerland
 
Samples (54) GSM525523, GSM525524, GSM525525, GSM525526, GSM525527, GSM525528 
Series (3)
GSE21046 Identification of differentially expressed genes in equine endometrium at day 8 and 12 of pregnancy
GSE22843 Identifying target genes involved in subclinical respiratory disease that develop in athletes: an insight from the horse athlete and the use of microarrays
GSE29553 Identification of differentially expressed genes in equine endometrium at day 16 of early pregnancy

Data table header descriptions
ID
Control Type Control type
Probe Name Probe Name
Systematic Name Systematic name
SEQUENCE Probe sequence
Eca Entrez Gene ID Equus caballus Entrez Gene ID
Eca Gene symbol Official Gene Symbol of the equine gene
Eca Gene name Official Entrez Gene Full Name of the equine gene
Eca Ensembl Gene ID Equus caballus Ensembl Gene ID
Associated Gene Name Associated Gene Name
Eca Description Description of the equine gene
ORF
GB_ACC GenBank accession number
SPOT_ID
Hsa Entrez Gene ID Entrez Gene ID of the putative human ortholog
Hsa Gene symbol Official Gene Symbol of the human ortholog gene
Hsa Gene name Official Entrez Gene Full Name of the human ortholog gene

Data table
ID Control Type Probe Name Systematic Name SEQUENCE Eca Entrez Gene ID Eca Gene symbol Eca Gene name Eca Ensembl Gene ID Associated Gene Name Eca Description ORF GB_ACC SPOT_ID Hsa Entrez Gene ID Hsa Gene symbol Hsa Gene name
1 1 GE_BrightCorner GE_BrightCorner --GE_BrightCorner
2 1 DarkCorner DarkCorner --DarkCorner
3 1 DarkCorner DarkCorner --DarkCorner
4 1 DarkCorner DarkCorner --DarkCorner
5 1 DarkCorner DarkCorner --DarkCorner
6 1 DarkCorner DarkCorner --DarkCorner
7 1 DarkCorner DarkCorner --DarkCorner
8 1 DarkCorner DarkCorner --DarkCorner
9 1 DarkCorner DarkCorner --DarkCorner
10 1 DarkCorner DarkCorner --DarkCorner
11 1 DarkCorner DarkCorner --DarkCorner
12 0 A_69_P091927 ENSECAT00000012332 AAGGGCTAATCCAAGATCAGCTACATAACTGGGCTGAGTCCTGTTCTAAACAAGATTGGG ENSECAG00000011844 DIAPH2 Protein diaphanous homolog 2 (Diaphanous-related formin-2)(DRF2) [Source:UniProtKB/Swiss-Prot;Acc:O60879] Ensembl: ENSECAG00000011844 1730 DIAPH2 diaphanous homolog 2 (Drosophila)
13 0 A_69_P083486 ENSECAT00000023127 TATGGAGCAAATCAATTGAACACTCCTGGCAGACTTGGCATCATGAGCTCAGAGGAAATG ENSECAG00000021532 AMBN Ameloblastin Precursor [Source:UniProtKB/Swiss-Prot;Acc:Q9NP70] Ensembl: ENSECAG00000021532 258 AMBN ameloblastin (enamel matrix protein)
14 0 A_69_P107141 ENSECAT00000025177 TGTGCACAAGAAAATGGTGAATTCAAGCTATCCAAAACTTCACGTTCAACCTAATTTACT 100061309 LOC100061309 hypothetical protein LOC100061309 ENSECAG00000023466 SLAIN2 SLAIN motif-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9P270] LOC100061309 57606 SLAIN2 SLAIN motif family, member 2
15 0 A_69_P115916 CD464389 CCAGCACGTGAATGACAATCTGAAGGACCTGTCAAAAGATGTAAGTAACATCATGACGAA 100066570 LOC100066570 hypothetical protein LOC100066570 - LOC100066570
16 0 A_69_P059676 ENSECAT00000014253 AAGATGCCGGAAATACGAAAGGCCTTGTTTGGAGCCAACGCCAACAGGAAGTTTTTTATC 100053341 LOC100053341 similar to ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E ENSECAG00000013717 ATP6V1E2 V-type proton ATPase subunit E 2 (V-ATPase subunit E 2)(Vacuolar proton pump subunit E 2) [Source:UniProtKB/Swiss-Prot;Acc:Q96A05] LOC100053341 90423 ATP6V1E2 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2
17 0 A_69_P085961 ENSECAT00000023081 AAGAAAGAAACAGTGAACTCCCCAGCAATTTACAAATTTCAGAGTCGTCGAAAACGTTGA 100054471 LOC100054471 hypothetical protein LOC100054471 ENSECAG00000021551 UTP11L Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11)(UTP11-like protein) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y3A2] LOC100054471 51118 UTP11L UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
18 0 A_69_P104311 CD536246 CACAATTTTCTTTATGCAGAAACGTTCTGATTAGGAGTGGATATTGACTGTAACTACACA CD536246 6304 SATB1 SATB homeobox 1
19 0 A_69_P088701 ENSECAT00000002264 CAAAAAGCTATGCATATCAAGAAAATCAGGGGCTGCTCCTTGTAGTACCGATGTAGTACG 100067185 MFAP3L microfibrillar-associated protein 3-like ENSECAG00000002425 MFAP3L Microfibrillar-associated protein 3-like Precursor (Testis development protein NYD-SP9) [Source:UniProtKB/Swiss-Prot;Acc:O75121] LOC100067185 9848 MFAP3L microfibrillar-associated protein 3-like
20 0 A_69_P124086 XM_001490193 GAGAACACATTTGGAGAGAAACTCTGTAAATGTAATAAATGAAGGAAATCATTCTGGGTG 100056446 LOC100056446 similar to zinc finger protein 37a (KOX 21) - LOC100056446 7587 ZNF37A zinc finger protein 37A

Total number of rows: 45220

Table truncated, full table size 12695 Kbytes.




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