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Platform GPL10295 Query DataSets for GPL10295
Status Public on Feb 11, 2011
Title Illumina human-6 v2.0 expression beadchip (using nuIDs as identifier)
Technology type oligonucleotide beads
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Illumina
Manufacture protocol see manufacturer's website
 
 
Submission date Apr 06, 2010
Last update date Feb 11, 2011
Contact name Marieke Lydia Kuijjer
Organization name Centre for Molecular Medicine Norway
Lab Kuijjer
Street address Gaustadalléen 21
City Oslo
ZIP/Postal code 0349
Country Norway
 
Samples (372) GSM530667, GSM530899, GSM531283, GSM531284, GSM531285, GSM531286 
Series (8)
GSE21257 Genome-wide gene expression profiling on pre-chemotherapy biopsies of osteosarcoma patients who developed metastases within 5yrs (n=34) and patients who did not develop metastases within 5yrs (n=19)
GSE28974 Genome-wide gene expression profiling of mesenchymal stem cells
GSE30699 Genome-wide mRNA analysis substantiates high-grade central osteosarcoma cell lines and xenografts as representative for their originating primary tumor type

Data table header descriptions
ID
Illumina_ProbeID Probe-level identifier assigned by Illumina for internal decoding of beads
Illumina_Gene Internal gene symbol
Search_Key Internal id useful for custom design array
GB_ACC GenBank Accession number
Symbol Gene symbol from the source database
SEQUENCE Probe sequence

Data table
ID Illumina_ProbeID Illumina_Gene Search_Key GB_ACC Symbol SEQUENCE
9g8cQB1TZtuiix.ulU 0000020605 ILMN_16367 ILMN_16367 NM_176818.1 15E1.2 GAATTACTACAAAACTCCCATCGCGTCGTGGAGGAGTACTTTGTGGCCCC
fJUdX0IAn_P9VLTgJU 0003450747 ILMN_16583 ILMN_16583 NM_177966.4 2'-PDE AGCCCACTCCCTTCAAGAAAAGCTTTGATTTTCCCCAGTCATGAAAGCCC
WkXHGxfrHvQnuojEms 0003060450 ILMN_19158 ILMN_19158 NM_014444.2 76P GCACCTACTACGTACCTTGGTACTGTTCAAGCTGTGGGAGATACAGCGGT
Ku8QhfS0n_hIOABXuE 0000870131 ILMN_5579 ILMN_5579 NM_182762.2 7A5 GTGTTACAAGACCTTCAGTCAGCTTTGGACAGAATGAAAAACCCTGTGAC
ckiehnugOno9d7vf1Q 0005310368 ILMN_18893 ILMN_18893 NM_130786.2 A1BG GCAGAGCTGGACGCTGTGGAAATGGCTGGATTCCTCTGTGTTCTTTCCCA
TdSfOuLunqrkiJkag8 0000770300 ILMN_5821 ILMN_5821 NM_018723.2 A2BP1 CTCCAGCTTATGGTGAGTGTGGCTGGGGGTGCAGAGAGCGCACGGGAATT
HA0vbfb5JI4D9_wRd4 0003290546 ILMN_9675 ILMN_9675 NM_145893.1 A2BP1 AAATCAGTTCGTCTTCGTTGCAGCAGATGAAATTTCTTGTAACACCTCTG
WS4S8aGL855YVcUUZE 0003420601 ILMN_5821 ILMN_5821 NM_018723.2 A2BP1 CAGTGACAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCAC
ZfoDn4IUQp4Auf56LU 0007400044 ILMN_8023 ILMN_8023 NM_000014.4 A2M CTTGGAAATGCTTGAAGACCACAAGGCTGAAAAGTGCTTTGCTGGAGTCC
iqp3UiKIa6yKuByIIw 0002100711 ILMN_17375 ILMN_17375 NM_144670.2 A2ML1 GGGGGCTCTCCAGAGAGGAGACGGTGGTAGAGGGTGAACTAGAGAAGATA
r33p5EJWUK57ZWL3no 0007570767 ILMN_42026 ILMN_42026 XM_940724.1 A3GALT2 TCTTCTGGCTGCACAAGCCCGCCAAGGTGCTGTCGCCCGAGTTCTGCTGG
W38p0ogk.wIBVRXllY 0005670674 ILMN_25424 ILMN_25424 NM_017436.4 A4GALT TCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCG
QUTgUoqmp7jyKCQRHo 0004590047 ILMN_19436 ILMN_19436 NM_016161.1 A4GNT CCACATGAACCAGGAGGGGCGGGCTGTGATTAGAGGAAGCAACACACTGG
BZKiEvS0eQ305U0v34 0000990129 ILMN_23093 ILMN_23093 NM_207290.1 AAA1 CGCAGGGAGACAGTTCAGTCACTGCAATCTTCATGCCCATCAGTTTCTTG
lhehl0Edel8XV_eBt0 0001410601 ILMN_22083 ILMN_22083 NM_207285.1 AAA1 GACCTGGACGCCTCAACACTCCTGGCCTTACCTCCCTTGCTGAACGTCTC
6Rff76jvd6HDh1KYhQ 0003520681 ILMN_21523 ILMN_21523 NM_207283.1 AAA1 CACCTTCTTTGTTGGGATGTTCTCTGGACTAATGACTCCAGGCGAGACCA
HshT.TuzF13i0V0rKg 0004590451 ILMN_22969 ILMN_22969 NM_207289.1 AAA1 GTAGACCATTTTCATGTGTATACCTCCTCTGAGTCACCCTCAGGTAGGGA
6TheVd.HiE1UF3lX6g 0000870088 ILMN_22994 ILMN_22994 NM_015665.3 AAAS CATGACCTGCCCCTCTTTACTGAGACATCCCCAACCTCTGCCCCTTGGGA
QueXUXiL5yqvftiNO0 0001110619 ILMN_22643 ILMN_22643 NM_023928.2 AACS GTGCTGCCTCCACCTGAGAGTTGCTAGGGGGTTCTTGTCGAGATCATGTC
xSoSAshSJ89KgqiIgo 0000620167 ILMN_34644 ILMN_34644 XM_376454.3 AACSL CAGGGACAGAAAGTAGACCAGAGCTTATTCAGGGAAGGGGAGAGAGAAGG

Total number of rows: 48701

Table truncated, full table size 5671 Kbytes.




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Supplementary data files not provided

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