NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL10340 Query DataSets for GPL10340
Status Public on Dec 31, 2010
Title Agilent-015223 Rat Genome CGH Microarray 244A
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Rattus norvegicus
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
 
Submission date Apr 19, 2010
Last update date Jan 17, 2013
Contact name Zhi-Qiang Ye
Organization name Shanghai Institutes for Biological Sciences
Lab Key Lab of Systems Biology
Street address No. 320 of Yueyang Road
City Shanghai
ZIP/Postal code 200031
Country China
 
Samples (3) GSM534421, GSM534422, GSM534423
Series (1)
GSE21387 Array CGH between GK and Wistar Rats for Detecting Copy Number Variations

Data table header descriptions
ID
ProbeUID Unique probe ID provided by Agilent
GeneName The symbol of the gene that the probe binds to. If no gene, use systematic name instead.
SystematicName The genomic position (based on RGSC 3.4, or UCSC rn4) that the probe binds.
SEQUENCE The probe sequence
GB_RANGE
Description Description of the gene that the probe binds.
GB_LIST

Data table
ID ProbeUID GeneName SystematicName SEQUENCE GB_RANGE Description GB_LIST
A_86_P00000160 225760 chr1:000150004-000150048 chr1:000150004-000150048 TCTCAGCCCACTTACCCTGGAGTGTCCCAAGCAACAGAATGTTTT NC_005100.2[000150004..000150048] Unknown
A_86_P00000685 15397 chr1:000422651-000422710 chr1:000422651-000422710 CATACCCAACATTCCTTTTTTAACATCACTTATATACAGTTTATATAAATTGGTAAAAGA NC_005100.2[000422651..000422710] Unknown
A_86_P00000713 84184 chr1:000438943-000439002 chr1:000438943-000439002 ACTGACTACATAGCACATACCATTCAACACCAAATAAACATTAGTTACTATTTCTGTCAC NC_005100.2[000438943..000439002] Unknown
A_86_P00000813 169723 chr1:000508668-000508727 chr1:000508668-000508727 CCCCTGATCTTAAAGAAAAAAACAAAACAAAACAAAAACAAATCTGATTTAAACTTTGCC NC_005100.2[000508668..000508727] Unknown
A_86_P00000870 130816 chr1:000535334-000535378 chr1:000535334-000535378 GCGGTGACCCTGTGCTCACCAGGTCCTCACTTCCAAAGTGAACAC NC_005100.2[000535334..000535378] Unknown
A_86_P00001020 136106 chr1:000610953-000610997 chr1:000610953-000610997 GTTTTGTCCTCAACCTTAACCCGCCCCGCAATGGTTTAACCCTAA NC_005100.2[000610953..000610997] Unknown
A_86_P00001100 96317 chr1:000641034-000641093 chr1:000641034-000641093 GGAAAGTTCTTCCTGGAAATAAAAAAAAAAAAAAAAGGCTTTTTTTAGATTTAACTTTCT NC_005100.2[000641034..000641093] Unknown
A_86_P00001162 105039 chr1:000674430-000674489 chr1:000674430-000674489 ACAGTTTTGTCAGGAATATTCTAGAAGTAAAAATCTATGATATGTATTGTGTAATCTTAC NC_005100.2[000674430..000674489] Unknown
A_86_P00001206 227658 chr1:000711877-000711936 chr1:000711877-000711936 TGTAAGTCACCACAACAGTTATTAATTCTGGCAAAATTAGTTGTCCTTAAAATTTATTGT NC_005100.2[000711877..000711936] Unknown
A_86_P00001269 147823 chr1:000785815-000785873 chr1:000785815-000785873 ATGGTCCACAAGTATTCTTTCTAGGCATTGTGATGGTCCACAAGTATAACAACTGTGTA NC_005100.2[000785815..000785873] Unknown
A_86_P00001393 189724 chr1:000861169-000861228 chr1:000861169-000861228 TCCCTACCAGTTTCTAAACTATTTGTAAAATAAATTTGCAATACAATCTTCAGAACTTCT NC_005100.2[000861169..000861228] Unknown
A_86_P00001834 226884 chr1:001147168-001147227 chr1:001147168-001147227 ACCACAAGACATTCTAAATCTCTAAGTGTCATGAATTAAGTCTCATAAAATTTAGATCTT NC_005100.2[001147168..001147227] Unknown
A_86_P00001890 146576 chr1:001179203-001179262 chr1:001179203-001179262 GTTTTCAGCAAAGAATCTAAATGAGATGATTATATATGCTTATCAAGACAGAGAATGCCA NC_005100.2[001179203..001179262] Unknown
A_86_P00001927 122073 chr1:001213990-001214049 chr1:001213990-001214049 AAAGACATCGAATAGAGGCTATTATATGTTCCACATGGAATCAAATATCTATTCCAACAA NC_005100.2[001213990..001214049] Unknown
A_86_P00001930 96576 chr1:001220996-001221055 chr1:001220996-001221055 AAAAAAAAGAAAATTTCAACATCAGGACACTTAATTGACCCAAACTGTATGTGTTCAAAA NC_005100.2[001220996..001221055] Unknown
A_86_P00001933 94131 chr1:001227848-001227907 chr1:001227848-001227907 TGCATACCAGTGTTGCATTAAAAAGACAAAACAAACTAAACAAACAAACAACAAAATGAC NC_005100.2[001227848..001227907] Unknown
A_86_P00001980 151230 chr1:001244155-001244214 chr1:001244155-001244214 AAATTGCTTTATGTGAGTATTGGAATGCCATTGGATTCATTATGGATGCAATGAAAGGCA NC_005100.2[001244155..001244214] Unknown
A_86_P00001998 149060 chr1:001257175-001257230 chr1:001257175-001257230 CCTAACTAAGTATACAGGAAGCCTGCTATAACTGGGCATATGGAGTCCTTCCATAA NC_005100.2[001257175..001257230] Unknown
A_86_P00002005 212829 chr1:001276995-001277054 chr1:001276995-001277054 GACTTGATATTAGATGCTTCTTCCTAAGGAGTAAACTTTAGGAGAGGACAAACAATATCG NC_005100.2[001276995..001277054] Unknown
A_86_P00002036 66357 chr1:001290312-001290371 chr1:001290312-001290371 TGAATATCTATACTGGGAAAACAGGAAAAATTGTTTTCTATAACATTCAGATTTGTCAGG NC_005100.2[001290312..001290371] Unknown

Total number of rows: 235974

Table truncated, full table size 45231 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap