|
| Status |
Public on May 05, 2010 |
| Title |
Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: Mm_Unigene_10] |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Mus musculus |
| Manufacturer |
Affymetrix |
| Manufacture protocol |
This is identical to GPL1261 but a custom cdf environment was used to extract data. The custom CDF (Mm_Unigene_10) can be found at the Web link below and also as a supplementary file at the foot of the record.
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| |
|
| Description |
CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan.
After probe sequences are BLASTed against the latest UniGene Build and genome sequence, a series of filtering and grouping criteria are applied for different CDF files.
A probe must hit only one genomic location.
Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set;
Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon;
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| |
|
| Web link |
http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/CDF_download.asp
|
| Contributor(s) |
Hirner S, Nakaya HI |
| Submission date |
Apr 29, 2010 |
| Last update date |
May 05, 2010 |
| Contact name |
Helder I. Nakaya |
| E-mail(s) |
hnakaya@usp.br
|
| Phone |
+551126481130
|
| Organization name |
Universidade de São Paulo
|
| Lab |
csbiology.com
|
| Street address |
AVENIDA PROFESSOR LINEU PRESTES, 580, Block 17
|
| City |
SÃO PAULO |
| State/province |
SÃO PAULO |
| ZIP/Postal code |
05508000 |
| Country |
Brazil |
| |
|
| Samples (8)
|
GSM539334, GSM539335, GSM539336, GSM539337, GSM539338, GSM539339
|
| Series (1) |
| GSE21602 |
Microarray analyses of lymph node dendritic cells (DCs) stimulated in vitro with papain or LPS |
|
| Relations |
| Alternative to |
GPL1261 (Alternative CDF [official]) |
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