GEO help: Mouse over screen elements for information.
Status
Public on Jan 01, 2011
Title
Agilent-021782 Custom Staphylococcus aureus V6 Array
Technology type
in situ oligonucleotide
Distribution
non-commercial
Organism
Staphylococcus aureus Manufacturer
Agilent
Manufacture protocol
In situ synthesis (SurePrint Technology)
Catalog number
N/A
Support
glass
Coating
unknown
Description
Staphylococcus aureus 564
Web link
http://www.genomic.ch Contributor(s)
Huyghe A , Fischer A , Francois P , Schrenzel J Submission date
Jun 14, 2010
Last update date
Apr 20, 2011
Contact name
FRANCOIS Patrice
E-mail(s)
patrice.francois@genomic.ch Phone
+41 (0)22 372 93 37
Organization name
Genomic Research Laboratory
Department
Service of Infectious Diseases
Lab
Genomic Research Lab
Street address
Rue Gabrielle-Perret-Gentil, 4
City
Geneva
State/province
Ge 4
ZIP/Postal code
1211
Country
Switzerland
Samples (71)
GSM559034 , GSM559035 , GSM559036 , GSM559037 , GSM559038 , GSM559039
GSM559040 ,
GSM559041 ,
GSM1110787 ,
GSM1110788 ,
GSM1110789 ,
GSM1110790 ,
GSM1110791 ,
GSM1110792 ,
GSM1110793 ,
GSM1110794 ,
GSM1110795 ,
GSM1110796 ,
GSM1110797 ,
GSM1110798 ,
GSM1139824 ,
GSM1139825 ,
GSM1139826 ,
GSM1139827 ,
GSM1139828 ,
GSM1139829 ,
GSM1182963 ,
GSM1182964 ,
GSM1182965 ,
GSM1182966 ,
GSM1182967 ,
GSM1182968 ,
GSM1182969 ,
GSM1182970 ,
GSM1182971 ,
GSM1182972 ,
GSM1182973 ,
GSM1182974 ,
GSM1182975 ,
GSM1182976 ,
GSM2043442 ,
GSM2043443 ,
GSM2043444 ,
GSM2043445 ,
GSM2043446 ,
GSM2043447 ,
GSM2043448 ,
GSM2043449 ,
GSM3464565 ,
GSM3464566 ,
GSM3464567 ,
GSM3464568 ,
GSM3464569 ,
GSM3464570 ,
GSM3464571 ,
GSM3464572 ,
GSM3464573 ,
GSM3464574 ,
GSM3464575 ,
GSM3464576 ,
GSM3814725 ,
GSM3814726 ,
GSM3814727 ,
GSM3814728 ,
GSM3814729 ,
GSM3814730 ,
GSM3814731 ,
GSM3814732 ,
GSM3814733 ,
GSM3814734 ,
GSM3814735 Series (7)
GSE22353 Study of ecs mutation
GSE45617 The stringent response of Staphylococcus aureus and its impact on survival after phagocytosis through the induction of intracellular PSMs expression
GSE46887 Switching on antibiotic resistance in Staphylococcus aureus – Contribution of WalK and VraS histidine kinases in the development of vancomycin and daptomycin resistance
GSE48656 GdpS contributes to Staphylococcus aureus biofilm formation by regulation of eDNA release
GSE77069 Daptomycin tolerance in the Staphylococcus aureus pitA6 mutant is due to upregulation of the dlt-operon
GSE122362 Systems biology of S.aureus adaptation under Ser/Thr kinase wild type and mutations of kinase (pknB) or phosphatase (stp)
GSE131722 Genetic Adaptation of a Mevalonate Pathway Deficient Mutant in Staphylococcus aureus
Data table header descriptions ID Seq ControlType Type of probe
ProbeName Name of probe
GeneName Name of ORF
ORF_ID Short name of ORF
GENE_Staph_aureus Gene name or function
SPOT_ID ORF ORF ORF ORF
Data table ID Seq ControlType ProbeName GeneName ORF_ID GENE_Staph_aureus SPOT_ID ORF ORF ORF ORF 1
DNA
1
GE_BrightCorner
GE_BrightCorner
CONTROL
2
DNA
1
DarkCorner
DarkCorner
CONTROL
3
DNA
1
DarkCorner
DarkCorner
CONTROL
4
DNA
0
V6_2373
SAOUHSC_01045;NWMN_0964;SA564_0147;UAMS-1_1011;
NC_007795:SAOUHSC_01045 NWMN_0964;SA564:SA564_0147;UAMS-1:UAMS-1_1011
Cro/CI family transcriptional regulator
SAOUHSC_01045 NWMN_0964 SA564_0147 UAMS-1_1011 10
DNA
0
V6_321
*;*;*;IO_30_85872_86413
V6_321
13
DNA
0
V6_1835
SAOUHSC_01888;NWMN_1661;SA564_2410;UAMS-1_1572;
NC_007795:SAOUHSC_01888 NWMN_1661;SA564:SA564_2410;UAMS-1:UAMS-1_1572
riboflavin synthase subunit alpha
SAOUHSC_01888 NWMN_1661 SA564_2410 UAMS-1_1572 16
DNA
0
V6_6410
SAOUHSC_00289;*
NC_007795:SAOUHSC_00289
hypothetical protein
SAOUHSC_00289 17
DNA
0
V6_2413
SAOUHSC_01091;*;NWMN_1048;*;SA564_0185;*;UAMS-1_0971;
NC_007795:SAOUHSC_01091 NWMN_1048;SA564:SA564_0185;UAMS-1:UAMS-1_0971
SpoU rRNA methylase
SAOUHSC_01091 NWMN_1048 SA564_0185 UAMS-1_0971 19
DNA
0
V6_612
;*;*;IO_17_88860_89824
V6_612
20
DNA
0
V6_3491
;IO_c_29_21353_21442;*;*
V6_3491
21
DNA
0
V6_3663
;c34374-34171;*;IO_c_202_1888_2428;
V6_3663
22
DNA
0
V6_3934
;*;*;IO_c_144_8518_8776;
V6_3934
25
DNA
0
V6_1331
SAOUHSC_02338;*;NWMN_2005;*;SA564_2512;*;UAMS-1_2083;
NC_007795:SAOUHSC_02338 NWMN_2005;SA564:SA564_2512;UAMS-1:UAMS-1_2083
hypothetical protein
SAOUHSC_02338 NWMN_2005 SA564_2512 UAMS-1_2083 26
DNA
0
V6_6463
TilingRegionA_1859:17
V6_6463
35
DNA
0
V6_1472
*;*;*;*;*;UAMS-1_1940;
UAMS-1:UAMS-1_1940
hypothetical protein
UAMS-1_1940 36
DNA
0
V6_2723
SAOUHSC_00577;NWMN_0553;SA564_2070;UAMS-1_0663;
NC_007795:SAOUHSC_00577 NWMN_0553;SA564:SA564_2070;UAMS-1:UAMS-1_0663
mevalonate kinase
SAOUHSC_00577 NWMN_0553 SA564_2070 UAMS-1_0663 38
DNA
0
V6_3001
;*;*;UAMS-1_0381;
UAMS-1:UAMS-1_0381
hypothetical protein
UAMS-1_0381 40
DNA
0
V6_5399
;c1649781-1649580;c1706580-1706379;*
V6_5399
42
DNA
0
V6_736
*;*;*;*;*;IO_12_35027_35242
V6_736
43
DNA
0
V6_3922
SAOUHSC_02386;*;*;IO_c_146_27623_28057;*;
NC_007795:SAOUHSC_02386
hypothetical protein
SAOUHSC_02386
7266 906 Kbytes .Supplementary data files not provided
Less...
More...