GEO help: Mouse over screen elements for information.
Status
Public on Jun 21, 2010
Title
Agilent-022270 Tomato Gene Expression Microarray (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Solanum lycopersicum Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
S. lycopersicum (Tomato) Oligo Microarray
Submission date
Jun 21, 2010
Last update date
Dec 06, 2012
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (81)
GSM562276 , GSM562277 , GSM562278 , GSM562279 , GSM562280 , GSM562281
GSM707214 ,
GSM707215 ,
GSM707216 ,
GSM707217 ,
GSM707218 ,
GSM707219 ,
GSM707220 ,
GSM707221 ,
GSM833234 ,
GSM833235 ,
GSM833236 ,
GSM833237 ,
GSM970819 ,
GSM970820 ,
GSM970821 ,
GSM970822 ,
GSM970823 ,
GSM970824 ,
GSM970825 ,
GSM970826 ,
GSM970827 ,
GSM1019114 ,
GSM1019115 ,
GSM1019116 ,
GSM1019117 ,
GSM1019118 ,
GSM1019119 ,
GSM1019120 ,
GSM1019121 ,
GSM1111372 ,
GSM1111373 ,
GSM1111374 ,
GSM1111375 ,
GSM1218175 ,
GSM1218176 ,
GSM1218177 ,
GSM1218178 ,
GSM1218179 ,
GSM1218180 ,
GSM1218181 ,
GSM1218182 ,
GSM1555996 ,
GSM1555997 ,
GSM1555998 ,
GSM1555999 ,
GSM1556000 ,
GSM1556001 ,
GSM1562347 ,
GSM1562348 ,
GSM1921941 ,
GSM1921942 ,
GSM3195642 ,
GSM3195643 ,
GSM3195644 ,
GSM3195645 ,
GSM3195646 ,
GSM3195647 ,
GSM3507498 ,
GSM3507499 ,
GSM3507500 ,
GSM3507501 ,
GSM3507502 ,
GSM3507503 ,
GSM3507504 ,
GSM3507505 ,
GSM3507506 ,
GSM3507507 ,
GSM3507508 ,
GSM3507509 ,
GSM5795942 ,
GSM5795943 ,
GSM5795944 ,
GSM5795945 ,
GSM5795946 ,
GSM5795947 Series (12)
GSE22682 Global gene expression analysis in the pedicel abscission zone of tomato flowers by DNA microarray
GSE28564 Global gene expression analysis of normal and ripening inhibitor (rin) mutant tomatoes during ripening
GSE39519 Expression profiling of tomato pre-abscission pedicels
GSE41560 Comparison of gene expression between wild type and FUL1/2 knockdown tomato fruits
GSE45658 Microarray analysis of ripening tomato fruits with RNAi knockdown of a direct RIN-target GRAS family gene
GSE50402 Transcriptional profile of tomato roots exhibiting Bacillus thuringiensis-induced resistance to Ralstonia solanacearum
GSE63708 Transcriptome profiling of RNAi-trasgenic Solanum lycopersicum plants resistant to Tomato yellow leaf curl virus
GSE64010 The tomato SlDREB2 transcription factor improves salt stress tolerance in tomato
GSE74504 The Solanum lycopersicum WRKY3 Transcription Factor Regulates Salt Stress Tolerance In Tomato
GSE115942 Identification of tomato genes responsive to loliolide, a metabolite of carotenoid metabolic pathways
GSE123589 Tomato gene expression profile in response to B. amyloliquefaciens CFCF
GSE193362 ProSys(1-178) constitutive expression
Relations Alternative to
GPL10571
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
NAME NAME
SPOT_ID Spot identifier
CONTROL_TYPE Control type
GB_ACC GenBankAccession
LOCUSLINK_ID LocuslinkID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
Data table ID COL ROW NAME SPOT_ID CONTROL_TYPE GB_ACC LOCUSLINK_ID GENE_SYMBOL GENE_NAME UNIGENE_ID ACCESSION_STRING CHROMOSOMAL_LOCATION DESCRIPTION GO_ID SEQUENCE 1
266
170
GE_BrightCorner
control
pos
2
266
168
DarkCorner
control
pos
3
266
166
DarkCorner
control
pos
4
266
164
DarkCorner
control
pos
5
266
162
DarkCorner
control
pos
6
266
160
DarkCorner
control
pos
7
266
158
DarkCorner
control
pos
8
266
156
DarkCorner
control
pos
9
266
154
DarkCorner
control
pos
10
266
152
DarkCorner
control
pos
11
266
150
DarkCorner
control
pos
12
266
148
A_96_P083629
A_96_P083629
FALSE
BG734919 Les.21785
gb|BG734919|ta|TA53862_4081
unmapped
cC-esflcLEL18J18d1 Tomato flower library from a mixture of developmental stages Lycopersicon esculentum cDNA, mRNA sequence [BG734919]
GATTGAGTGAATGACCCTATGTTCGTATAGACAGATCTTTCTGCGTACATATATGTTATA
13
266
146
A_96_P050531
A_96_P050531
FALSE
GO374675 Les.12779
gb|GO374675|ta|TA43890_4081|ta|DB711252|ta|DB710423
unmapped
ctsc4a5 Tomato Seed Library [C] Solanum lycopersicum cDNA clone cTSC-4-A5 5', mRNA sequence [GO374675]
AAAGTCAGATCCAAGGAAAATTGGAGCCTATTATAAGGAAATGCTGAATTCAGATCCTGT
14
266
144
A_96_P052746
A_96_P052746
FALSE
CK715105 Les.13288
gb|CK715105|ta|TA50279_4081|tc|TC214435
unmapped
LECAD02J03 Seedlings treated with 0.2mM CdCl2 Lycopersicon esculentum cDNA clone LECAD02J03, mRNA sequence [CK715105]
GTCTTGAAGAGAGCCAGAAGGGGATATCAGAAGGTTAGGCTTACCTAGGTATTGCATGTT
15
266
142
A_96_P063341
A_96_P063341
FALSE
DB703148 Les.16752
gb|DB703148|ta|TA48096_4081|tc|TC197557
unmapped
DB703148 Solanum lycopersicum cv. Micro-Tom leaf Solanum lycopersicum cDNA clone LEFL1078DC01 5', mRNA sequence [DB703148]
GACCGTGTATATGTTTGCCTACTTGAGCAGCTATTTTGATTTTGTTCTTTTCAGTTGTCA
16
266
140
A_96_P171949
A_96_P171949
FALSE
AK323080 Les.8412
gb|AK323080|ta|BE431500|tc|TC196182
unmapped
Solanum lycopersicum cDNA, clone: LEFL1048DH05, HTC in leaf [AK323080]
TGGCTAAATGGTTCGTGTCATCCCTAGAAATGTCCTCCATTACAAAAGGGAACATGTTGA
17
266
138
A_96_P018231
A_96_P018231
FALSE
BT013680 Les.5303
gb|BT013680|ta|TA52893_4081|tc|TC193064
unmapped
Lycopersicon esculentum clone 132502R, mRNA sequence [BT013680]
CTGGAGACGTTCTGGTTCATCCTTTGTAATATGTTATTTCCTATTCGAGATGGAAATATA
18
266
136
A_96_P170129
A_96_P170129
FALSE
BT012851 Les.3204
gb|BT012851|ta|TA36493_4081|ta|TA36495_4081|ta|AW979703
unmapped
Lycopersicon esculentum clone 113930R, mRNA sequence [BT012851]
AAATTTGCAACTTAGAACTTGGGACTATCTGTGTTTCTGATTCATGCTGACTGGGGTCCC
19
266
134
A_96_P246817
A_96_P246817
FALSE
ta|DV104671|ta|BG126842
unmapped
GO:0005739(mitochondrion)
TAAGCATATTGTGCCTTGTGGGATTGTCAATAAAGGTGTTACGTCTTTGAAGAATGAGAC
20
266
132
A_96_P220509
A_96_P220509
FALSE
Les.7464
ta|BP905978
unmapped
ACCTTGTGATAATGGACAATCCAGCTCGCATAATTAAAAGAAAAGCTGGACAAACAGTGG
45220 9793 Kbytes .Supplementary data files not provided
Less...
More...