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Platform GPL10583 Query DataSets for GPL10583
Status Public on Nov 15, 2010
Title Baseman Mycoplasma genitalium oligo array
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Mycoplasmoides genitalium
Manufacturer Microarray Inc.
Manufacture protocol Standard company protocol
Support glass
Coating unknown
 
Description This array includes spotted 70-mer oligonucleotides, designed to represent 484 open reading frame in the annotated M. genitalium genome.
 
Contributor(s) Baseman JB, Zhang W
Submission date Jun 24, 2010
Last update date Nov 15, 2010
Contact name Wenbo Zhang
E-mail(s) zhangw4@uthscsa.edu
Phone 210 567 3991
Organization name The University of Texas Health Science Center at San Antonio
Department Microbiology and Immunology
Street address 7703 Floyd Curl Drive
City San Antonio
State/province TX
ZIP/Postal code 78229
Country USA
 
Samples (17) GSM623325, GSM623326, GSM623327, GSM623328, GSM623329, GSM623330 
Series (1)
GSE22661 Transcriptome of Mycoplasma genitalium under osmotic stress

Data table header descriptions
ID
ORF
Block block within array, numbered left to right
Column column within array
Row row within array
SEQUENCE sequence of oligonucleotide probe (70mer)
SPOT_ID spot identifier

Data table
ID ORF Block Column Row SEQUENCE SPOT_ID
1 MG_001 4 1 1 TAGTAAGTATTTTTTGATAACCTCTAAAAGTGAACCTGAACTTAAGCAAATATTGGTTCCTTCAAGATAA
2 MG_001 8 1 1 TAGTAAGTATTTTTTGATAACCTCTAAAAGTGAACCTGAACTTAAGCAAATATTGGTTCCTTCAAGATAA
3 MG_001 12 1 1 TAGTAAGTATTTTTTGATAACCTCTAAAAGTGAACCTGAACTTAAGCAAATATTGGTTCCTTCAAGATAA
4 MG_095 4 2 1 CTTGAAACGCAGCGTTCTCGTGGTAGTTACAATCCCACCGCTTCACTTACTATGATTAAGTTAGGAGATG
5 MG_095 8 2 1 CTTGAAACGCAGCGTTCTCGTGGTAGTTACAATCCCACCGCTTCACTTACTATGATTAAGTTAGGAGATG
6 MG_095 12 2 1 CTTGAAACGCAGCGTTCTCGTGGTAGTTACAATCCCACCGCTTCACTTACTATGATTAAGTTAGGAGATG
7 MG_002 4 3 1 AAAATTTAGATATTAGTGTTAGATGACATGAAAATTTCATGGAAGAACTCGAACTTCGTAAGACCTGAGA
8 MG_002 8 3 1 AAAATTTAGATATTAGTGTTAGATGACATGAAAATTTCATGGAAGAACTCGAACTTCGTAAGACCTGAGA
9 MG_002 12 3 1 AAAATTTAGATATTAGTGTTAGATGACATGAAAATTTCATGGAAGAACTCGAACTTCGTAAGACCTGAGA
10 MG_096 4 4 1 TACAACGGCTGGTATAATGTCCACTGGTGAAACTGGCTCCCTGCTAAAATTTTAGGGATTCCTACAGACT
11 MG_096 8 4 1 TACAACGGCTGGTATAATGTCCACTGGTGAAACTGGCTCCCTGCTAAAATTTTAGGGATTCCTACAGACT
12 MG_096 12 4 1 TACAACGGCTGGTATAATGTCCACTGGTGAAACTGGCTCCCTGCTAAAATTTTAGGGATTCCTACAGACT
13 MG_003 4 5 1 GATAATTTTGTTACCCGTGTAGAGGATGATGGAAGAGGGATACCTGTTGATATCCATCCTAAGACTAATC
14 MG_003 8 5 1 GATAATTTTGTTACCCGTGTAGAGGATGATGGAAGAGGGATACCTGTTGATATCCATCCTAAGACTAATC
15 MG_003 12 5 1 GATAATTTTGTTACCCGTGTAGAGGATGATGGAAGAGGGATACCTGTTGATATCCATCCTAAGACTAATC
16 MG_097 4 6 1 GTTGATGGATTTGAGCATTTATCATATCCCCATCCCTCACCACTAAGTGGTAATTTGTTTCTAACAAACC
17 MG_097 8 6 1 GTTGATGGATTTGAGCATTTATCATATCCCCATCCCTCACCACTAAGTGGTAATTTGTTTCTAACAAACC
18 MG_097 12 6 1 GTTGATGGATTTGAGCATTTATCATATCCCCATCCCTCACCACTAAGTGGTAATTTGTTTCTAACAAACC
19 MG_004 4 7 1 TCTATAGATGGTGATAGACCTGCTGCACAACGTTATACAGAAGCAAGATTATCTAAACTTGCAGCAGAAC
20 MG_004 8 7 1 TCTATAGATGGTGATAGACCTGCTGCACAACGTTATACAGAAGCAAGATTATCTAAACTTGCAGCAGAAC

Total number of rows: 1536

Table truncated, full table size 129 Kbytes.




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