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Status
Public on Sep 01, 2010
Title
NimbleGen_Schmidtea mediterranea_385k array
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Schmidtea mediterranea Manufacturer
NimbleGen
Manufacture protocol
High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
Description
NimbleGen design name 2007-11-06_Smed_ESTs_4_expr, NimbleGen design ID 6642. An expression design for 16,797 ESTs from Schmidtea mediterranea with ten 60-mer probes per gene. Each probe is replicated twice. The design includes random GC and other control probes.
Submission date
Jul 07, 2010
Last update date
Sep 01, 2010
Contact name
Phillip Newmark
E-mail(s)
pnewmark@life.illinois.edu Organization name
University of Illinois, Urbana-Champaign
Department
Cell and Developmental Biology
Street address
C609 CLSL, 601 S. Goodwin Ave.
City
Urbana
State/province
IL
ZIP/Postal code
61801
Country
USA
Samples (54)
GSM563575 , GSM563576 , GSM563577 , GSM563578 , GSM563579 , GSM563580
GSM563581 ,
GSM563582 ,
GSM802896 ,
GSM802897 ,
GSM1528708 ,
GSM1528709 ,
GSM1528710 ,
GSM1528711 ,
GSM1528712 ,
GSM1528713 ,
GSM1528714 ,
GSM1528715 ,
GSM1528716 ,
GSM1528717 ,
GSM1528718 ,
GSM1528719 ,
GSM1528720 ,
GSM1528721 ,
GSM1528722 ,
GSM1528723 ,
GSM1528724 ,
GSM1528725 ,
GSM1528726 ,
GSM1528727 ,
GSM1528728 ,
GSM1528729 ,
GSM1528730 ,
GSM1528731 ,
GSM1528732 ,
GSM1528733 ,
GSM1528734 ,
GSM1528735 ,
GSM1528736 ,
GSM1528737 ,
GSM1528738 ,
GSM1528739 ,
GSM1528740 ,
GSM1528741 ,
GSM1528742 ,
GSM1528743 ,
GSM1528744 ,
GSM1528745 ,
GSM1528746 ,
GSM1528747 ,
GSM1528748 ,
GSM1528749 ,
GSM1528750 ,
GSM1528751 Series (3)
GSE22797 Expression analyses of nanos(RNAi) and control(RNAi) Schmidtea mediterranea
GSE32450 Molecular markers to characterize the hermaphroditic reproductive system of the planarian Schmidtea mediterranea
GSE62551 Identification of genes differentially expressed during half-head regeneration in Schmidtea mediterranea
Data table header descriptions ID GI_LIST nucleotide accession list
SPOT_ID nucleotide accession list
Data table ID GI_LIST SPOT_ID Contig1_SE3
84604780 , 84589637 , 84591529 , 84594956 , 84601638 Contig10_SE3
84604763 , 84606944 , 84604830 , 84589668 , 84602502 , 84602513 , 84594565 , 84595152 , 84595030 , 84591821 , 84599407 , 84601060 , 84592462 , 84596553 , 84599541 Contig100_SE3
84602790 , 84589962 , 84598663 , 84591338 , 84598120 , 84601183 Contig1000_SE3
84603747 , 84592419 Contig1000_WUSTL
1374064023, 1389000391, 1389000548, 1389002359, 1440434530, 1450455553, 1450463162, 1450463191, 1463479567, 1463483088, 1608868041, 1608869809
Contig1001_SE3
84603749 , 84592420 Contig1002_SE3
84603754 , 84592424 Contig1003_SE3
84603769 , 84592426 Contig1004_SE3
84603770 , 84592427 Contig1005_SE3
84606049 , 84592428 , 84597908 , 84594977 Contig1006_SE3
84605920 , 84612139 , 84592429 , 84597643 Contig1006_WUSTL
1389000624, 1389003369, 1608874648
Contig1007_SE3
84603774 , 84592433 Contig1007_WUSTL
1389000632, 1463485492, 1608869320
Contig1008_SE3
84604795 , 84607110 , 84589709 , 84592434 , 84600202 , 84599545 , 84590557 , 84595050 , 84591014 , 84591067 Contig1009_SE3
84604887 , 84592435 , 84595104 Contig1009_WUSTL
1389000642, 1463485502
Contig101_SE3
84602792 , 84589963 Contig1010_SE3
84604410 , 84592450 , 84593977 Contig1011_SE3
84606142 , 84610097 , 84610703 , 84615686 , 84592455 , 84592468 , 84592189 , 84598233
16797 712 Kbytes .Supplementary file Size Download File type/resource GPL10652_2007-11-06_Smed_ESTs_4_expr.ndf.gz
23.0 Mb
(ftp) (http) NDF
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