NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL10707 Query DataSets for GPL10707
Status Public on Jul 22, 2010
Title Grossman Lab WGS8-9
Technology type spotted DNA/cDNA
Distribution non-commercial
Organisms Escherichia coli; Bacillus subtilis subsp. subtilis str. 168
Manufacturer Research Technology Support Facility at Michigan State University, East Lansing, Michigan
Manufacture protocol PCR products were prepared using a combination of the Sigma-Genosys Bacillus subtilis ORFmer PCR primer pairs and additional primers designed by the Grossman and Losick labs on a case-by-case basis. Products were spotted on Corning UltraGAPS aminosilane coated glass slides using a Genetix Q-Array Mini printer.
 
 
Contributor(s) Grossman AD, Smits WK
Submission date Jul 20, 2010
Last update date Jul 22, 2010
Contact name Alan D. Grossman
E-mail(s) clee2@mit.edu, adg@mit.edu
Phone 617-253-6702
Organization name MIT
Department Biology
Lab Grossman
Street address 31 Ames Street, 68-530
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Samples (100) GSM570846, GSM570847, GSM570848, GSM570849, GSM570850, GSM570851 
Series (4)
GSE23199 Chromatin immunoprecipitation of Rok-myc and Hbs-myc in Bacillus subtilis
GSE23686 Genome-wide binding of replication initiation proteins in Bacillus subtilis
GSE69788 Expression profiles of dnaA null, rok null, and dnaA null; rok null mutants

Data table header descriptions
ID
Block Identifies the sector of the array, and thus the print tip, in which this feature is found
Column Which column of the block this feature appears in
Row Which row of the block this feature appears in
Name Common gene name if available, or other identifying information
ORF Gene symbol in Entrez Gene
BS_ID ORF identifier; for B. subtilis genes, the BG number given by Subtilist
SPOT_ID identifier for empty, control and bad spots

Data table
ID Block Column Row Name ORF BS_ID SPOT_ID
1 1 1 1 ycbJ ycbJ BG11165
2 1 2 1 ycdF ycdF BG12761
3 1 3 1 yceD yceD BG12768
4 1 4 1 opuAC opuAC BG11372
5 1 5 1 yclQ yclQ BG12037
6 1 6 1 gabT gabT BG12043
7 1 7 1 ycsA ycsA BG11222
8 1 8 1 ydaD ydaD BG12052
9 1 9 1 ydcT ydcT BG12107
10 1 10 1 yddB yddB BG12109
11 1 11 1 yddD yddD BG12111
12 1 12 1 yddT yddT BG12127
13 1 13 1 lplB lplB BG10435
14 1 14 1 yetF yetF BG12862
15 1 15 1 yfnD yfnD BG12975
16 1 16 1 yfmO yfmO BG12966
17 1 17 1 ygxA ygxA BG10951
18 1 1 2 yhxA yhxA BG10184
19 1 2 2 glpF glpF BG10186
20 1 3 2 yhdG yhdG BG13013

Total number of rows: 4624

Table truncated, full table size 149 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap