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Platform GPL10765 Query DataSets for GPL10765
Status Public on Aug 10, 2010
Title Genotypic designed Agilent in situ synthesised Mus musculus & Staphylococcus aureus gene expression profiling microarray
Technology type in situ oligonucleotide
Distribution commercial
Organisms Staphylococcus aureus; Mus musculus
Manufacturer Agilent Technologies
Manufacture protocol www.chem.agilent.com
 
 
Web link http://www.genotypic.co.in/custom_micro_design.html?mnu=1
Contributor(s) Mugasimangalam RC, Shukla RN, Sinha S
Submission date Aug 06, 2010
Last update date Jan 17, 2013
Contact name Genotypic technology
E-mail(s) sudha.rao@genotypic.co.in
Organization name Genotypic Technology
Street address 259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE
City Bangalore
State/province Karnataka
ZIP/Postal code 560094
Country India
 
Samples (8) GSM577129, GSM577130, GSM577131, GSM577132, GSM577133, GSM577134 
Series (1)
GSE23538 Host pathogen interaction between Staphylococcus aureus ATCC25923 and murine RAW264.7 macrophage-like cells

Data table header descriptions
ID
COL Column Number
ROW Row Number
NAME Name
CONTROL_TYPE Agilent Control Type
GENE_SYMBOL Gene Symbol
ACCESSION_STRING Acccessind string
DESCRIPTION Gene Description
ORGANISM
SEQUENCE Sequence
GB_ACC GenBank Accession number
ORF ORF Name
SPOT_ID Agiletn Spot ID

Data table
ID COL ROW NAME CONTROL_TYPE GENE_SYMBOL ACCESSION_STRING DESCRIPTION ORGANISM SEQUENCE GB_ACC ORF SPOT_ID
1 96 164 GE_BrightCorner pos CONTROL
2 96 162 DarkCorner pos CONTROL
3 96 160 DarkCorner pos CONTROL
4 96 158 GT_Sa_5632 FALSE SAOUHSC_00922 SAOUHSC_00922|locus|SAOUHSC_00922|geneId|3920809 hypothetical protein SAOUHSC_00922 Staphylococcus aureus ATTTTTGATTTTACTTGTACAAGAAGGCATTTTTGATGCGACAAGTTATGGTTTTAGAAG SAOUHSC_00922
5 96 156 GT_Sa_52_P138090 FALSE Nr3c1 AK171439|gb|AK171439 Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730215N04 product:hypothetical protein, full insert sequence [AK171439] Mus musculus AAATGGCTGTATGAAAATACCCTCCTAAATACCCTGCTTAACTACATATAGATTTCAGTG AK171439
6 96 154 GT_Sa_52_P211172 FALSE Ifna12 NM_177361|gb|NM_177361 Mus musculus interferon alpha family, gene 12 (Ifna12), mRNA [NM_177361] Mus musculus GAGCAGAAGTCTGGAGAACCCTGTCTTCCTCAGCTAAGTTGCTGGCAAGACTGAGTGAGA NM_177361
7 96 152 GT_Sa_0226 FALSE SAOUHSC_00276 SAOUHSC_00276|locus|SAOUHSC_00276|geneId|3918960 hypothetical protein SAOUHSC_00276 Staphylococcus aureus GTGAATTTGACTTTACAAGAGACGGCAAATTGAATGTTTCATTTGATTATATTGATTGGG SAOUHSC_00276
8 96 150 GT_Sa_0030 FALSE rpmJ SAOUHSC_02488|locus|SAOUHSC_02488|geneId|3920865 50S ribosomal protein L36 Staphylococcus aureus AAAGTAAGACCATCAGTAAAACCTATTTGCGAAAAATGTAAAGTCATTAAACGTAAAGGT SAOUHSC_02488
9 96 148 GT_Sa_51_P266521 FALSE Cdk2 NM_016756|gb|NM_016756 Mus musculus cyclin-dependent kinase 2 (Cdk2), transcript variant 2, mRNA [NM_016756] Mus musculus GGAAATTTTCTATAAAAGAGTGAACAATTATATTTATATTTCAAGTTAAAGTAGTTTGGA NM_016756
10 96 146 GT_Sa_51_P498004 FALSE Gna11 NM_010301|gb|NM_010301 Mus musculus guanine nucleotide binding protein, alpha 11 (Gna11), mRNA [NM_010301] Mus musculus GATCCATTGCTTTGAGAACGTGACTTCCATCATGTTCTTGGTGGCACTAAGCGAGTATGA NM_010301
11 96 144 GT_Sa_51_P505156 FALSE Dgkz NM_138306|gb|NM_138306 Mus musculus diacylglycerol kinase zeta (Dgkz), mRNA [NM_138306] Mus musculus TGGACAGAGCTCAGCATCGATGTCAGGGAGGCCTGCACTCAGCAGGACTTTCAAAAGCCA NM_138306
12 96 142 GT_Sa_51_P281024 FALSE Rad9 NM_011237|gb|NM_011237 Mus musculus RAD9 homolog (S. pombe) (Rad9), mRNA [NM_011237] Mus musculus GACAAGAGAGACAGAGGCTATGGTGAGAATCCAGCTTTGACCTTTATTCAAGAGACCAGA NM_011237
13 96 140 GT_Sa_52_P105840 FALSE Fnbp1 NM_001038700|gb|NM_001038700 Mus musculus formin binding protein 1 (Fnbp1), transcript variant 1, mRNA [NM_001038700] Mus musculus CCCGGATTTCGACGATGAATTTGATGATGAGGAGCCGCTTCCAGCCATAGGGACCTGCAA NM_001038700
14 96 138 GT_Sa_52_P247185 FALSE Masp1 AK031598|gb|AK031598 Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030458D19 product:mannan-binding lectin serine protease 1, full insert sequence. [AK031598] Mus musculus AACTGGGAAGAGTCATCAAAACACACTCCAATATCTATGAATGGCACATGTAAAGGATAC AK031598
15 96 136 GT_Sa_51_P406913 FALSE Gdf7 NM_013527|gb|NM_013527 Mus musculus growth differentiation factor 7 (Gdf7), mRNA [NM_013527] Mus musculus TTCTGGCTTCAGGAACGGCTCGGTGGTGCCACACCACTTCATGATGTCGCTTTACAGGAG NM_013527
16 96 134 GT_Sa_52_P549815 FALSE Dsp XM_621314|gb|XM_621314 PREDICTED: Mus musculus desmoplakin, transcript variant 1 (Dsp), mRNA [XM_621314] Mus musculus TGTATCGCTCCTTGAACGATCCCCGAGATAGTCAGAAGAACTTCGTGGATCCAATCACCA XM_621314
17 96 132 GT_Sa_0453 FALSE SAOUHSC_02406 SAOUHSC_02406|locus|SAOUHSC_02406|geneId|3919621 hypothetical protein SAOUHSC_02406 Staphylococcus aureus TATTACGCTTGAAAACAAAGTAACTAAAAAGATGACAGTTCAACCTGATGTAAGTCAGA SAOUHSC_02406
18 96 130 GT_Sa_1425 FALSE SAOUHSC_01212 SAOUHSC_01212|locus|SAOUHSC_01212|geneId|3919478 hypothetical protein SAOUHSC_01212 Staphylococcus aureus AGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAATACTACATATAATGCCAAATA SAOUHSC_01212
19 96 128 GT_Sa_51_P377237 FALSE Kras NM_021284|gb|NM_021284 Mus musculus v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog (Kras), mRNA [NM_021284] Mus musculus ACGATGCCTTCTATACATTAGTCCGAGAAATTCGAAAACATAAAGAAAAGATGAGCAAAG NM_021284
20 96 126 GT_Sa_51_P342387 FALSE Apoh NM_013475|gb|NM_013475 Mus musculus apolipoprotein H (Apoh), mRNA [NM_013475] Mus musculus AGTCGTTTCCAGAATCAAAATTGAATGTCGTATTTGTATTTCTGCTTGTCTTAGGAATCC NM_013475

Total number of rows: 15744

Table truncated, full table size 3447 Kbytes.




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