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Status
Public on Nov 15, 2010
Title
Candida albicans 45K assembly 21
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Candida albicans Manufacturer
Agilent
Manufacture protocol
Oligonucleotides were designed the 27th of October 2007 according with the latest Candida albicans annotation from CGD (http://www.candidagenome.org ) assembly 21, using eArray from Agilent Technology (Design ID 017942). Each of 6101 open reading frames is represented by two oligonucleotides probes. Mitochondrial genes are indicated by the prefix CaalfMp. The probes were used to generate custom microarrays in a 4x44 K format with a randomized layout.
Submission date
Sep 10, 2010
Last update date
Sep 22, 2017
Contact name
Alessandro Guida
E-mail(s)
alessandro.guida@ucd.ie Phone
+353 871337884
Fax
+353 871337884
Organization name
University College Dublin
Lab
Butler group
Street address
belfield
City
Dublin
ZIP/Postal code
Dublin 4
Country
Ireland
Samples (25)
GSM592270 , GSM592271 , GSM592272 , GSM592273 , GSM592274 , GSM592275
GSM592276 ,
GSM592277 ,
GSM592278 ,
GSM592279 ,
GSM592280 ,
GSM592281 ,
GSM592282 ,
GSM592283 ,
GSM592284 ,
GSM592285 ,
GSM592286 ,
GSM592287 ,
GSM592288 ,
GSM592289 ,
GSM592290 ,
GSM827642 ,
GSM827643 ,
GSM827644 ,
GSM827645 Series (6)
GSE24073 Transcriptional profile of Candida albicans during Hypoxic conditions.
GSE24074 Transcriptional profile of Candida albicans DAY286 culture without ketoconazole versus DAY286 culture with 0.04 μg/ml ketoconazole, both at 20% oxygen (normoxia).
GSE24075 Transcriptional profile of Candida albicans DAY286 versus UPC2 delete, both at 1% oxygen (hypoxia).
GSE24076 Hypoxia, ketoconazole, and the UPC2 gene in Candida albicans
GSE33460 Transcriptional profile of Candida albicans bcr1 knockout.
GSE33490 Conserved and divergent roles of Bcr1 and CFEM proteins in Candida parapsilosis and Candida albicans
Relations Alternative to
GPL24041 (probe name version)
Data table header descriptions ID Block Agilent block number
Row Row
Column Column
identifier Spot identifier
Name Gene name
ORF SPOT_ID SEQUENCE probe sequence
Data table ID Block Row Column identifier Name ORF SPOT_ID SEQUENCE 1
1
1
1
GE_BrightCorner
GE_BrightCorner
--GE_BrightCorner
2
1
1
2
GE_BrightCorner
GE_BrightCorner
--GE_BrightCorner
3
1
1
3
DarkCorner
DarkCorner
--DarkCorner
4
1
1
4
DarkCorner
DarkCorner
--DarkCorner
5
1
1
5
DarkCorner
DarkCorner
--DarkCorner
6
1
1
6
DarkCorner
DarkCorner
--DarkCorner
7
1
1
7
DarkCorner
DarkCorner
--DarkCorner
8
1
1
8
DarkCorner
DarkCorner
--DarkCorner
9
1
1
9
DarkCorner
DarkCorner
--DarkCorner
10
1
1
10
DarkCorner
DarkCorner
--DarkCorner
11
1
1
11
DarkCorner
DarkCorner
--DarkCorner
12
1
1
12
DarkCorner
DarkCorner
--DarkCorner
13
1
1
13
DarkCorner
DarkCorner
--DarkCorner
14
1
1
14
DarkCorner
DarkCorner
--DarkCorner
15
1
1
15
DarkCorner
DarkCorner
--DarkCorner
16
1
1
16
DarkCorner
DarkCorner
--DarkCorner
17
1
1
17
DarkCorner
DarkCorner
--DarkCorner
18
1
1
18
DarkCorner
DarkCorner
--DarkCorner
19
1
1
19
DarkCorner
DarkCorner
--DarkCorner
20
1
1
20
null
--null
45220 3630 Kbytes .Supplementary data files not provided
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