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Platform GPL11035 Query DataSets for GPL11035
Status Public on Oct 12, 2010
Title Agilent 020807 Shanghai Institutes for Biological Sciences Bombyx mori 15K array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Bombyx mori
Manufacturer Agilent
Manufacture protocol see Agilent official protocal
 
Description 14623 silkworm candidate genes according to SilkDB were arranged on the Agilent 8*15K two-color chips.
 
Contributor(s) Huang Y
Submission date Oct 09, 2010
Last update date Oct 12, 2010
Contact name Shuai Zhan
Organization name Shanghai Institutes for Biological Sciences
Street address 300 Fenglin Road
City Shanghai
ZIP/Postal code 200032
Country China
 
Samples (3) GSM606832, GSM606833, GSM606834
Series (1)
GSE24611 silkworm temporal expression profiles

Data table header descriptions
ID
Row
Col
chr_coord
SubTypeMask
SubTypeName
Start
SEQUENCE Probe sequence information for each point
ProbeUID
ControlType
ProbeName
GeneName
SystematicName
SPOT_ID
SilkDB ID

Data table
ID Row Col chr_coord SubTypeMask SubTypeName Start SEQUENCE ProbeUID ControlType ProbeName GeneName SystematicName SPOT_ID SilkDB ID
1 1 1 260 BrightCorner 0 0 1 GE_BrightCorner GE_BrightCorner GE_BrightCorner --GE_BrightCorner
2 1 2 66 Structural 0 1 1 DarkCorner DarkCorner DarkCorner --DarkCorner
3 1 3 66 Structural 0 1 1 DarkCorner DarkCorner DarkCorner --DarkCorner
4 1 4 unmapped 0 0 CCAAAGTACCAGATGTGCATCAGCATGTTATAAATTTAGGTATGGAATGTATACAGGAAT 3 0 sw13740 sw13740 sw13740 sw13740
5 1 5 unmapped 0 0 AACATACAGTGGCGCAAAAACGGAAAGAAAGTTTCCAACATGCAAACCCGCTACCAAGTA 5 0 sw05841 sw05841 sw05841 sw05841
6 1 6 unmapped 0 0 ATTCAAAGCTTACAACATCCGCTACTACGTCGGTGGCAGGGACACATATCTAGGAGAATT 7 0 sw07621 sw07621 sw07621 sw07621
7 1 7 unmapped 0 0 GCTACTCCTGGGGCTCCGGGAACTCCTGCTGTGCCGCCGAGTGGCTTGCGGCCGCGATAG 9 0 sw04698 sw04698 sw04698 sw04698
8 1 8 unmapped 0 0 AACACAGAGTCCTATCGACTCGCCCTAGAAGAAAACACGGAATTGACTGAACAAGTCTAT 11 0 sw07107 sw07107 sw07107 sw07107
9 1 9 unmapped 0 0 TTATATTGCAAAGGGAAGCAAGTGTATGGAAGTCAGATACGGGCAGTGTCTGGACGATGA 13 0 sw03204 sw03204 sw03204 sw03204
10 1 10 unmapped 0 0 AGGCGCGCGAAACAATTTGTAATAATTGATGAATCAACTTACGAAATGATTTTGTCCGAA 15 0 sw00982 sw00982 sw00982 sw00982
11 1 11 unmapped 0 0 TATCTTCTTGGAGTGGCCGTGATCAGTTTTTGGTTTGAGGTCACTGCGATTATCTTACTG 17 0 sw14341 sw14341 sw14341 sw14341
12 1 12 unmapped 0 0 GCTTGCAAAGAACCATCGACTATTTCAAAGAAGAATTATCAAGGACTACGCTTTACAATA 19 0 sw11625 sw11625 sw11625 sw11625
13 1 13 unmapped 0 0 CGTTCTCAATGATGATCGGAGTGTTCTTATTTTCATTTGTTTTCCTGTATTACAAAGAGG 21 0 sw03633 sw03633 sw03633 sw03633
14 1 14 unmapped 0 0 GGCTCTTCTTGTCAAATCTATTTCATGACTCTAAACAAACCCGGAATGGCCAACTGGTAG 23 0 sw03697 sw03697 sw03697 sw03697
15 1 15 unmapped 0 0 CACCTGAAACAGTTACTGAAAAACCTGGCTTTTGGAAATCAGTAGGAAGTAAATTAAGTA 25 0 sw06263 sw06263 sw06263 sw06263
16 1 16 unmapped 0 0 ATAGGTCACATACCGGAAAATATGTCACATTGCATGATGCCGCCATATGGCGGAATGCTA 27 0 sw03200 sw03200 sw03200 sw03200
17 1 17 unmapped 0 0 TTATTCACTGGTTCATCGGATAGTTATGCTCGATTATGGAACATTGAGCGTGGCACGCTT 29 0 sw12983 sw12983 sw12983 sw12983
18 1 18 unmapped 0 0 GAAATTTGTGCTGTTACGTCAGTGCCGCCTTTGAAAACTGCCACAACAAAGTCCAATTAA 31 0 sw14777 sw14777 sw14777 sw14777
19 1 19 unmapped 0 0 GTAATAAATGTTGGGGAGAGCTCATTGAGTGACAGTGACGATTCATCAGATTTTGATTAA 33 0 sw12710 sw12710 sw12710 sw12710
20 1 20 unmapped 0 0 TTGACAAATGACGGAAAAGCCGTCGAAGAAAAGGTCATGGAATACAAAGATGGCGATTAA 35 0 sw01142 sw01142 sw01142 sw01142

Total number of rows: 15498

Table truncated, full table size 1894 Kbytes.




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