GEO help: Mouse over screen elements for information.
Status
Public on Jan 18, 2011
Title
[HuGene-1_1-st] Affymetrix Human Gene 1.1 ST Array [transcript (gene) version]
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Homo sapiens
Manufacturer
Affymetrix
Manufacture protocol
see manufacturer's web site
Description
HuGene-1_1-st-v1.na32.hg19.transcript.csv #%create_date=Tue Jun 21 17:41:46 2011 PDT #%chip_type=HuGene-1_1-st-v1 #%lib_set_name=HuGene-1_1-st #%lib_set_version=v1 #%genome-species=Homo sapiens #%genome-version=hg19 #%genome-version-ucsc=hg19 #%genome-version-ncbi=GRCh37 #%genome-version-create_date=2009-02-00 #%genome-lifted-method=liftOver #%genome-lifted_from-species=Homo sapiens #%genome-lifted_from-version-ucsc=hg18 #%genome-lifted_from-version-ncbi=36.1 #%netaffx-annotation-date=2011-06-22 #%netaffx-annotation-netaffx-build=32
Web link
http://www.affymetrix.com/browse/products.jsp?navMode=34000&productId=131554&navAction=jump&aId=productsNav#1_1 http://www.affymetrix.com/analysis/index.affx
Submission date
Jan 18, 2011
Last update date
Nov 08, 2016
Organization
Affymetrix, Inc.
E-mail(s)
geo@ncbi.nlm.nih.gov, support@affymetrix.com
Phone
888-362-2447
URL
http://www.affymetrix.com/index.affx
Street address
City
Santa Clara
State/province
CA
ZIP/Postal code
95051
Country
USA
Samples (8328)
GSM737553 , GSM737554 , GSM737555 , GSM737556 , GSM738121 , GSM738122
GSM738123 ,
GSM738124 ,
GSM738125 ,
GSM738126 ,
GSM738127 ,
GSM738128 ,
GSM738129 ,
GSM785637 ,
GSM785638 ,
GSM785639 ,
GSM785640 ,
GSM785641 ,
GSM785642 ,
GSM785643 ,
GSM785644 ,
GSM785645 ,
GSM785646 ,
GSM785647 ,
GSM785648 ,
GSM801198 ,
GSM801199 ,
GSM801200 ,
GSM801201 ,
GSM801202 ,
GSM801203 ,
GSM801204 ,
GSM801205 ,
GSM801206 ,
GSM801207 ,
GSM801208 ,
GSM801209 ,
GSM801210 ,
GSM801211 ,
GSM801212 ,
GSM801213 ,
GSM801214 ,
GSM801215 ,
GSM801216 ,
GSM801217 ,
GSM801627 ,
GSM801628 ,
GSM801629 ,
GSM801630 ,
GSM801631 ,
GSM801632 ,
GSM801633 ,
GSM801634 ,
GSM801635 ,
GSM801636 ,
GSM801637 ,
GSM801638 ,
GSM801639 ,
GSM801640 ,
GSM801641 ,
GSM801642 ,
GSM880755 ,
GSM880756 ,
GSM880757 ,
GSM880758 ,
GSM880759 ,
GSM880760 ,
GSM880761 ,
GSM880762 ,
GSM880763 ,
GSM880764 ,
GSM880765 ,
GSM880766 ,
GSM880767 ,
GSM880768 ,
GSM880769 ,
GSM880770 ,
GSM880771 ,
GSM880772 ,
GSM880773 ,
GSM913323 ,
GSM913324 ,
GSM913325 ,
GSM913326 ,
GSM913327 ,
GSM913328 ,
GSM913329 ,
GSM913330 ,
GSM916203 ,
GSM916204 ,
GSM916205 ,
GSM916206 ,
GSM916207 ,
GSM916208 ,
GSM916209 ,
GSM917011 ,
GSM917012 ,
GSM917013 ,
GSM917014 ,
GSM917015 ,
GSM917016 ,
GSM917017 ,
GSM917018 ,
GSM917019 ,
GSM917020 ,
GSM917021 ,
GSM917022 ,
GSM917023 ,
GSM917024 ,
GSM917025 ,
GSM917026 ,
GSM917027 ,
GSM917028 ,
GSM917029 ,
GSM917030 ,
GSM917031 ,
GSM917032 ,
GSM917033 ,
GSM917034 ,
GSM917035 ,
GSM917036 ,
GSM917037 ,
GSM917038 ,
GSM917039 ,
GSM917040 ,
GSM917041 ,
GSM917042 ,
GSM917043 ,
GSM917044 ,
GSM917045 ,
GSM917046 ,
GSM917047 ,
GSM917048 ,
GSM917049 ,
GSM917050 ,
GSM917051 ,
GSM917052 ,
GSM917053 ,
GSM917054 ,
GSM917055 ,
GSM917056 ,
GSM917057 ,
GSM917058 ,
GSM917059 ,
GSM917060 ,
GSM917061 ,
GSM917062 ,
GSM917063 ,
GSM917064 ,
GSM917065 ,
GSM917066 ,
GSM917067 ,
GSM917068 ,
GSM917069 ,
GSM917070 ,
GSM917071 ,
GSM917072 ,
GSM917073 ,
GSM917074 ,
GSM917075 ,
GSM917076 ,
GSM917077 ,
GSM917078 ,
GSM917079 ,
GSM917080 ,
GSM917081 ,
GSM917082 ,
GSM917083 ,
GSM917084 ,
GSM917085 ,
GSM917086 ,
GSM917087 ,
GSM917088 ,
GSM917089 ,
GSM917090 ,
GSM917091 ,
GSM917092 ,
GSM917093 ,
GSM917094 ,
GSM917095 ,
GSM917096 ,
GSM917097 ,
GSM917098 ,
GSM917099 ,
GSM917100 ,
GSM917101 ,
GSM917102 ,
GSM917103 ,
GSM917104 ,
GSM917105 ,
GSM917106 ,
GSM917107 ,
GSM917108 ,
GSM917109 ,
GSM917110 ,
GSM917111 ,
GSM917112 ,
GSM917113 ,
GSM917114 ,
GSM917115 ,
GSM917116 ,
GSM917117 ,
GSM917118 ,
GSM917119 ,
GSM917120 ,
GSM917121 ,
GSM917122 ,
GSM917123 ,
GSM917124 ,
GSM917125 ,
GSM917126 ,
GSM917127 ,
GSM917128 ,
GSM917129 ,
GSM917130 ,
GSM917131 ,
GSM917132 ,
GSM917133 ,
GSM917134 ,
GSM917135 ,
GSM917136 ,
GSM917137 ,
GSM917138 ,
GSM917139 ,
GSM917140 ,
GSM917141 ,
GSM917142 ,
GSM917143 ,
GSM917144 ,
GSM917145 ,
GSM917146 ,
GSM917147 ,
GSM917148 ,
GSM917149 ,
GSM917150 ,
GSM917151 ,
GSM917152 ,
GSM917153 ,
GSM917154 ,
GSM917155 ,
GSM917156 ,
GSM917157 ,
GSM917158 ,
GSM917159 ,
GSM917160 ,
GSM917161 ,
GSM917162 ,
GSM917163 ,
GSM917164 ,
GSM917165 ,
GSM917166 ,
GSM917167 ,
GSM917168 ,
GSM917169 ,
GSM917170 ,
GSM917171 ,
GSM917172 ,
GSM917173 ,
GSM917174 ,
GSM917175 ,
GSM917176 ,
GSM917177 ,
GSM917178 ,
GSM917179 ,
GSM917180 ,
GSM917181 ,
GSM917182 ,
GSM917183 ,
GSM917184 ,
GSM917185 ,
GSM917186 ,
GSM917187 ,
GSM917188 ,
GSM917189 ,
GSM917190 ,
GSM917191 ,
GSM917192 ,
GSM917193 ,
GSM917194 ,
GSM917195 ,
GSM917196 ,
GSM917197 ,
GSM917198 ,
GSM917199 ,
GSM917200 ,
GSM917201 ,
GSM917202 ,
GSM917203 ,
GSM917204 ,
GSM917205 ,
GSM917206 ,
GSM917207 ,
GSM917208 ,
GSM917209 ,
GSM917210 ,
GSM917211 ,
GSM917212 ,
GSM917213 ,
GSM917214 ,
GSM917215 ,
GSM917216 ,
GSM917217 ,
GSM917218 ,
GSM917219 ,
GSM917220 ,
GSM917221 ,
GSM917222 ,
GSM917223 ,
GSM917224 ,
GSM917225 ,
GSM917226 ,
GSM917227 ,
GSM917228 ,
GSM917229 ,
GSM917230 ,
GSM917231 ,
GSM917232 ,
GSM917233 ,
GSM917234 ,
GSM917235 ,
GSM917236 ,
GSM917237 ,
GSM917238 ,
GSM917239 ,
GSM917240 ,
GSM917241 ,
GSM917242 ,
GSM917243 ,
GSM917244 ,
GSM917245 ,
GSM917246 ,
GSM917247 ,
GSM917248 ,
GSM917249 ,
GSM917250 ,
GSM917251 ,
GSM917252 ,
GSM917253 ,
GSM917254 ,
GSM917255 ,
GSM917256 ,
GSM917257 ,
GSM917258 ,
GSM917259 ,
GSM917260 ,
GSM917261 ,
GSM917262 ,
GSM917263 ,
GSM917264 ,
GSM917265 ,
GSM917266 ,
GSM917267 ,
GSM917268 ,
GSM917269 ,
GSM917270 ,
GSM917271 ,
GSM917272 ,
GSM917273 ,
GSM917274 ,
GSM917275 ,
GSM917276 ,
GSM917277 ,
GSM917278 ,
GSM917279 ,
GSM917280 ,
GSM917281 ,
GSM917282 ,
GSM917283 ,
GSM917284 ,
GSM917285 ,
GSM917286 ,
GSM917287 ,
GSM917288 ,
GSM917289 ,
GSM917290 ,
GSM917291 ,
GSM917292 ,
GSM917293 ,
GSM917294 ,
GSM917295 ,
GSM932522 ,
GSM932523 ,
GSM932524 ,
GSM932525 ,
GSM932526 ,
GSM932527 ,
GSM932528 ,
GSM932529 ,
GSM932530 ,
GSM932531 ,
GSM932532 ,
GSM932533 ,
GSM932534 ,
GSM932535 ,
GSM932536 ,
GSM932537 ,
GSM932538 ,
GSM932539 ,
GSM932540 ,
GSM932541 ,
GSM932542 ,
GSM932543 ,
GSM932544 ,
GSM932545 ,
GSM932546 ,
GSM932547 ,
GSM932548 ,
GSM932549 ,
GSM932550 ,
GSM932551 ,
GSM932552 ,
GSM932553 ,
GSM967918 ,
GSM967919 ,
GSM967920 ,
GSM967921 ,
GSM967922 ,
GSM967923 ,
GSM967924 ,
GSM967925 ,
GSM967926 ,
GSM967927 ,
GSM967928 ,
GSM967929 ,
GSM967930 ,
GSM967931 ,
GSM967932 ,
GSM967933 ,
GSM967934 ,
GSM967935 ,
GSM967936 ,
GSM967937 ,
GSM967938 ,
GSM994840 ,
GSM994841 ,
GSM994842 ,
GSM994843 ,
GSM994844 ,
GSM994845 ,
GSM994846 ,
GSM994847 ,
GSM994848 ,
GSM994849 ,
GSM994850 ,
GSM994851 ,
GSM994852 ,
GSM994853 ,
GSM994854 ,
GSM994855 ,
GSM994856 ,
GSM994857 ,
GSM994858 ,
GSM994859 ,
GSM994860 ,
GSM994861 ,
GSM999538 ,
GSM999539 ,
GSM999540 ,
GSM999541 ,
GSM1017517 ,
GSM1017518 ,
GSM1017519 ,
GSM1017520 ,
GSM1017521 ,
GSM1017522 ,
GSM1017523 ,
GSM1017524 ,
GSM1017525 ,
GSM1017526 ,
GSM1017527 ,
GSM1017528 ,
GSM1017529 ,
GSM1017530 ,
GSM1017531 ,
GSM1017532 ,
GSM1017533 ,
GSM1017534 ,
GSM1017535 ,
GSM1017536 ,
GSM1017537 ,
GSM1017538 ,
GSM1017539 ,
GSM1017540 ,
GSM1017541 ,
GSM1017542 ,
GSM1017543 ,
GSM1017544 ,
GSM1017545 ,
GSM1017546 ,
GSM1017547 ,
GSM1017548 ,
GSM1017549 ,
GSM1017550 ,
GSM1017551 ,
GSM1017552 ,
GSM1017553 ,
GSM1017554 ,
GSM1017555 ,
GSM1017556 ,
GSM1017557 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here
Series (180)
GSE29753
Gene expression profiles of dental follicle cells after 48 hours of transfection in vitro with a DLX3 plasmid and an empty vector
GSE29770
Transduction of human fibroblasts with Zic3 combined with OCT4, SOX2 and KLF4 induces stable neural progenitor cell lines
GSE31628
Gene expression profiles of DFCs and SHED 48 hours after in vitro transfection with a TP53 plasmid, a SP1 plasmid, or an empty vector.
GSE32357
Calorie restriction-like effects of 30 days of resveratrol supplementation on energy metabolism and metabolic profile in obese humans
GSE32387
Prolactin stimulation of parathyroid adenomas
GSE36075
Estrogen receptor dynamics in diverse patient-derived luminal breast cancer xenografts
GSE37189
Gene expression profiles of dental neural crest progenitor cells (dNC-PCs) and stem cells of exfoliated descidious teeth (SHED)
GSE37329
Genome-wide gene expression during osteogenic and myogenic differentiation from adipose- derived stem cells.
GSE37382
Subgroup specific somatic copy number aberrations in the medulloblastoma genome [mRNA]
GSE37385
Subgroup specific somatic copy number aberrations in the medulloblastoma genome
GSE38026
KRAS-genotype dependent gene expression pattern in colorectal cancer
GSE39420
Gene expression profile of sporadic and PSEN1 early-onset Alzheimer’s Disease
GSE40484
Human inflammatory dendritic cells induce Th17 differentiation
GSE40706
Short-chain fatty acids stimulate angiopoietin-like 4 synthesis in human colonocytes by selective PPARγ modulation
GSE41446
Early molecular assessment of osseointegration in humans
GSE41505
Expression data from obese children (boys)
GSE41769
Effects of acute exercise on gene expression in exercising and non-exercising human skeletal muscle
GSE41816
Gene expression profiling of MDA231, BT549, and SUM159PT cells after selumetinib treatment or DUSP4 siRNA knockdown
GSE41905
A global transcriptome analysis of keratinocytes upon suppression of endogenous microRNA-31
GSE42288
Comparative molecular assessment of implant adherent cells in smokers and non-smokers
GSE42432
Effects of 30 days resveratrol supplementation on adipose tissue morphology and gene expression patterns in obese men
GSE42680
Early B-cell Factor 1 Regulates Adipocyte Morphology and Lipolysis in White Adipose Tissue [expression profiling]
GSE43191
Genome wide-DNA methylation analysis of articular chondrocytes reveals a cluster of osteoarthritic patients (gene expression)
GSE43270
Genome wide-DNA methylation analysis of articular chondrocytes reveals a cluster of osteoarthritic patients
GSE43642
Influence of dietary fatty acid composition on white adipose tissue gene expression in humans
GSE43816
Response to Neoadjuvant Chemotherapy in Triple Negative Breast tumors.
GSE44265
HIV-1 Tat protein promotes neuronal dysfunction through disruption of microRNAs.
GSE44266
Deregulation of microRNAs by HIV-1 Vpr protein leads to the development of neurocognitive disorders.
GSE44561
Effect of Notch1 pathway activation on high-grade glioma cells
GSE45205
Effects of miR-106a~363 blocking sponge on Sk-ES-1 Ewing Sarcoma Cell line Gene Expression Profile
GSE45220
Expression data from HT-29, a human colonic epithelial cell line
GSE45593
GENOMICS TO IDENTIFY HLA IDENTICAL RENAL TRANSPLANT TOLERANCE SIGNATURES
GSE45898
Gene Expression analysis of therapeutical response in Triple Negative Breast tumors.
GSE46440
Insights into the invasiveness of triple negative breast cancer from genome-wide profiling of transcription factor AP-1 (expression)
GSE46441
Insights into the invasiveness of triple negative breast cancer from genome-wide profiling of transcription factor AP-1
GSE48452
Human liver biopsy of different phases from control to NASH
GSE49007
Gene expression profiles of dental follicle cells after seven days of ostoeogenic differentiation
GSE49058
Aging-induced differential methylation in human PBMCs occurs with but often without change in expression of the associated gene (Expression)
GSE49065
Aging-induced differential methylation in human PBMCs occurs with but often without change in expression of the associated gene
GSE49185
Glucosamine profiling of lymphocyte derived cell lines
GSE50541
Experimentally identified targets of a subset of adenovirus 5-encoded miRNAs.
GSE50765
Sox2 signature in SHH medulloblastomas
GSE50838
Expression data from activated NK cells [RNA]
GSE50840
Expression data from activated NK cells
GSE51266
Gene expression changes induced by LKB1 expression in human lung adenocarcinoma cell lines
GSE51284
Expression data from monozygotic twins discordant for nicotine metabolism
GSE51305
Gene expression profiles of Sunitinib-treated but not untreated short-term serum-free cultures predict treatment response of human high-grade gliomas in vitro
GSE52026
A low meal frequency improves 24h metabolic and gene expression profiles in subjects with impaired glucose tolerance (PBMC)
GSE52027
A low meal frequency improves 24h metabolic and gene expression profiles in subjects with impaired glucose tolerance (muscle)
GSE52028
A low meal frequency improves 24h metabolic and gene expression profiles in subjects with impaired glucose tolerance
GSE53232
High fat challenges with different fatty acids affect distinct atherogenic gene expression pathways in immune cells from lean and obese subjects
GSE53382
Dynamic time course mRNA profiling of human skeletal muscle cell differentiation.
GSE53384
miRNA-transcriptome expression pattern during differentiation in human skeletal muscle cells
GSE53598
Effects of mixed exercise training on gene expression in human skeletal muscle
GSE54058
Growth signals employ CGGBP1 to suppress transcription of Alu-SINEs [Affymetrix]
GSE54059
Growth signals employ CGGBP1 to suppress transcription of Alu-SINEs
GSE54627
Combinatorial flexibility of cytokine during Human T helper cells differentiation
GSE54890
Early B-cell Factor 1 Regulates Adipocyte Morphology and Lipolysis in White Adipose Tissue
GSE54949
Functional Genomics of miR-2909 in HeLa229 cells.
GSE55561
Gene expression profiles of PDX models with acquired resistance to endocrine treatments
GSE55681
Increased Rho GTPase activity is associated with decreased tumor inhibitory activity of immortalized fibroblasts
GSE56716
A healthy Nordic diet has a beneficial influence on the expression of genes involved in inflammation in subcutaneous adipose tissue
GSE56832
The inhibition of tumor cell proliferation and motility by fibroblasts is both contact and soluble factor dependent
GSE57199
Confrontation of fibroblasts with cancer cells in vitro: gene network analysis of transcriptome changes and differential capacity to inhibit tumor growth
GSE57338
RNA-Seq Identifies Novel Myocardial Gene Expression Signatures of Heart Failure [microarray]
GSE57345
RNA-Seq Identifies Novel Myocardial Gene Expression Signatures of Heart Failure
GSE57379
Insights into the proliferation and invasiveness of breast cancer from genome-wide profiling of estrogen receptor beta 2
GSE58315
Transcriptome Analysis of the Human Corneal Endothelium
GSE58684
Defining CD4 T Cell Memory by the Epigenetic Landscape of CpG DNA Methylation [Affymetrix]
GSE59034
A Memory for Obesity in Adipose Tissue
GSE59498
Synthetic amorphous magnesium-substituted calcium phosphate: silent constructs that trap macromolecules for intracellular delivery
GSE59860
Defining CD4 T Cell Memory by the Epigenetic Landscape of CpG DNA Methylation
GSE59949
Expression data from human dental follicle cells
GSE60037
iPS from healthy control and BMPR2 mutant
GSE60251
The whole transcriptome expression profiling comparison between the CtBP1 knockdown, CtBP2 knockdown and scramble control in ovarian cancer SKOV3 cells
GSE60252
The whole transcriptome expression profiling comparison between the ovarian cancer spheroids and monolayer cells
GSE60803
Redifferentiation of adult human β cells expanded in vitro by inhibition of the WNT pathway
GSE61256
Obesity accelerates epigenetic aging of human liver
GSE61260
Human liver gene expression data from subjects of varying ages
GSE62175
Mastermind-like protein 1 regulates DNA methylation and expression of early developmental gene clusters in human embryonic kidney cells (expression)
GSE62178
Mastermind-like protein 1 regulates DNA methylation and expression of early developmental gene clusters in human embryonic kidney cells
GSE62333
Transcriptomic profiles of skin fibroblasts from patients affected by schizophrenia and controls
GSE62803
Relative spatial homogeneity revealed by transcriptional profiling of multi-region medulloblastoma samples
GSE63984
Expression data to identify putative transcriptional targets of ZNF165 in Triple Negative Breast Cancer (TNBC)
GSE63986
Integrative Functional Characterization of Cancer-Testis Antigens Defines Obligate Participation in Multiple Hallmarks of Cancer
GSE64250
ASA404 and TNFα treatment in preclinical models of endocrine tumors is associated with differential TNF-R 1 and TLR- 4 –signaling
GSE64998
Altered DNA methylation of glycolytic and lipogenic genes in liver from obese and type 2 diabetic patients [transcriptome analysis]
GSE65058
Altered DNA methylation of glycolytic and lipogenic genes in liver from obese and type 2 diabetic patients
GSE66525
A gene expression profile associated with relapse of cytogenetically normal acute myeloid leukemia is enriched for leukemia stem cell genes
GSE66660
Gene expression changes in U937 cells in response to ectopic expression of EVI1 and/or etoposide treatment
GSE66723
Highly efficient in vivo delivery of functional RNAs using new versatile MS2-chimeric retrovirus-like particles
GSE66787
Spinal Ependymoma Gene Expression Data
GSE67297
Cold acclimation improves insulin sensitivity in patients with type 2 diabetes mellitus.
GSE67311
Peripheral Blood Gene Expression in Fibromyalgia Patients Reveals Potential Biological Markers and Physiological Pathways
GSE67784
A Gene Expression-based Blood Diagnostic for Symptomatic Transthyretin Amyloidosis Revealing Male and Female-specific Signatures
GSE68255
Innate Immune Recognition of Bacterial Viability Instructs Human T follicular Helper Cell Differentiation
GSE68759
Effect of Healthy Nordic diet on gene expression in peripheral blood mononuclear cells
GSE69408
Expression data from human HSPCs
GSE69658
Inhibition of ZEB1 expression induces redifferentiation of adult human β cells expanded in vitro
GSE71116
Density Gradients Separate Dormant and Treatment-Resistant Human Glioblastoma Cells
GSE71220
The effect of statins on blood gene expression in COPD
GSE71272
Paracrine effects of estrogen on 231BR cells, through ER+ astrocytes
GSE71620
The effects of aging on circadian patterns of gene expression in the human prefrontal cortex
GSE71731
The impact of PPARα activation on whole genome gene expression in human precision-cut liver slices
GSE71915
Genome-wide profiling of inflammatory cistrome reveals AP-1/c-Jun as a key regulator of TNFalpha-mediated triple-negative breast cancer progression [microarray]
GSE71977
Genome-wide profiling of inflammatory cistrome reveals AP-1/c-Jun as a key regulator of TNFalpha-mediated triple-negative breast cancer progression.
GSE73408
Blood transcriptional biomarkers for active TB among US patients: A case-control study with systematic cross-classifier evaluation.
GSE74560
Whole blood gene expression from overweight women supplemented with quercetin or placebo
GSE74988
The effects of Lactobacillus plantarum on small intestinal barrier function and mucosal gene transcription; a randomized double-blind placebo controlled trial
GSE75821
Early regulation of profibrotic genes in primary human cardiac myocytes by Trypanosoma cruzi
GSE76003
Effects of Gut Microbiota Manipulation by Antibiotics on Host Metabolism in Obese Humans: a Randomized Double-blind Placebo-controlled Trial
GSE76161
Gene expression profiling in human precision-cut liver slices upon treatment with the FXR agonist obeticholic acid [human]
GSE76163
Gene expression profiling in human precision-cut liver slices upon treatment with the FXR agonist obeticholic acid
GSE76351
Genomic and transcriptomic data integration and its automated analysis in clear-cell renal cell carcinoma suggests population heterogeneity of causes and mechanism of the disease
GSE76951
Gene expression analysis of MCF12A human breast cultures exposed to ethanol or acetaldehyde [4 weeks]
GSE76953
Gene expression analysis of MCF12A human breast cultures exposed to ethanol or acetaldehyde
GSE76990
Validation study: Response-predictive gene expression profiling of glioma progenitor cells in vitro
GSE77343
Gene expression in chronic heart failure patients
GSE77344
Gene expression in chronic obstructive pulmonary disease (COPD) patients
GSE77962
Adipose tissue gene expression is differentially regulated with different rates of weight loss in overweight and obese humans
GSE78699
Different pathogenic stimuli induce specific metabolic rewiring in human monocytes
GSE79041
(CTA) expression after exposure to 5-aza-2'-deoxycytidine in HCT116 cells
GSE80410
Characterization of tumor-associated-macrophage of breast cancer patient-derived xenografts
GSE81504
Expression data generated by full-length and truncated syndecan-1 overexpression in B6FS fibrosarcoma cell line
GSE83893
The effect of onion exposure on gene expression profiles in intestinal Caco-2 cells
GSE83922
Expression data from young and senescent melanocytes
GSE84046
The impact of protein quantity during energy restriction on genome-wide gene expression analysis in human adipose tissue
GSE84453
Pure epicatechin and inflammatory gene expression profiles in circulating immune cells in (pre) hypertensive adults; a randomized double-blind, placebo-controlled, crossover trial
GSE84539
The whole transcriptome expression profiling comparison between the Pin1 knockIn in Hose cells and Pin1 knockdown in ovarian cancer MCAS and SK-OV-3 cells
GSE87382
Dietary medium-chain saturated fatty acids induce gene expression of energy metabolism-related pathways in adipose tissue of abdominally obese subjects
GSE88794
Transcriptome as marker for nutrition-related health: added value of time course analyses during challenge tests before and after energy restriction
GSE92484
Expression data from ORMDL3 knockdown in the A549 Human Lung Epithelial cell line
GSE93109
Patient-derived luminal breast cancer xenografts with progestins
GSE93606
Host-Microbial interactions in Idiopathic Pulmonary Fibrosis
GSE93944
Estrogen and progesterone receptor dynamics in patient-derived luminal breast cancer xenografts
GSE93970
CD54-mediated interaction with pro-inflammatory macrophages increases the immunosuppresive function of human mesenchymal stromal cells
GSE94619
The histone demethylase KDM3A, and its downstream target MCAM, promote Ewing Sarcoma cell migration and metastasis
GSE94752
Global transcriptome profiling identifies KLF15 and SLC25A10 as regulators of adipocytes insulin sensitivity in obese women [WAT]
GSE94753
Global transcriptome profiling identifies KLF15 and SLC25A10 as regulators of adipocytes insulin sensitivity in obese women
GSE97298
Gene expression in pulmonary non-tuberculous mycobacterial infection
GSE99217
Expression data from ovarian cells growing in three dimensional culture (Matrigel) with altered expression of miR-200s
GSE99610
The effect of dietary fibre exposure on gene expression profiles in intestinal Caco-2 cells
GSE99611
The effect of dietary fibre exposure on gene expression profiles of THP-1 macrophages
GSE99612
The effect of dietary fibre exposure on gene expression profiles in Caco-2 and THP-1 cells
GSE100281
COPD is accompanied by coordinated transcriptional perturbation in the quadriceps affecting the mitochondria and ECM
GSE100541
Transcriptome-based identification of the beneficial role of blackcurrant, strawberry and yellow onion to attenuate the cytopathic effects of Clostridium difficile toxins
GSE101602
Term Amniotic Fluid: An Unexploited Reserve of Mesenchymal Stromal Cells for Reprogramming and Potential Cell Therapy Applications
GSE102046
Transcriptomic analysis of in vitro-generated human monocyte-derived cells
GSE103382
Expresson of CD271 HIGH and LOW populations in melanoma cells during invasion
GSE103581
First trimester human placenta prevents breast cancer cell attachment to the matrix: the role of extracellular matrix
GSE103987
MAP3K8 is a major regulator of inflammation in human airway epithelial cells
GSE104616
Expression data of synchronised primary human fibroblasts (NHDF, Data Set 1)
GSE104617
Expression data of synchronised primary human fibroblasts (NHDF, Data Set 2)
GSE104619
Expression data of synchronised mouse embryonic fibroblasts (MEF) and synchronised primary human fibroblasts (NHDF)
GSE104783
Response to the combination of farnesyltransferase inhibitors and gamma-secretase inhibitors in glioblastoma stem cells
GSE106475
Genomic Circuitry Underlying Immunological Response to Pediatric Acute Respiratory Infection
GSE107041
The whole genome effects of the PPARα agonist fenofibrate on livers of hepatocyte humanized mice
GSE115022
The effect of probiotic Lactobacilli strains, inulin-type fructans and oligofructose on gene expression profiles in intestinal Caco-2 cells
GSE118278
Klotho suppresses colorectal cancer through modulation of the unfolded protein response
GSE119478
Adipocytes induce melanoma plasticity by sensitizing cells to TGFb
GSE134381
Metabolomics, Transcriptomic and Genetic - Integrative Analysis Reveals Important Roles of Adenosine Diphosphate in Haemostasis and Platelet Activation in Non-Small Cell Lung Cancer
GSE136778
TGFβ1 determines the fate of human adipose-derived stromal cells by restraining their immaturity and white/beige adipocyte potentials
GSE141602
Expression data of HEL cells with or without LY2784544 and GRN163L
GSE142639
BRCAness, SLFN11 and RB1 loss predict response to topoisomerase I inhibitors in triple negative breast cancers
GSE146661
Expression data from Patient-derived tumor models (PDX) establish from bone metastases and match human breast primary tumor.
GSE151101
Disruption of Y chromosome expression in male lung cancer: discovery
GSE151102
Disruption of Y chromosome expression in male lung cancer: replication
GSE151103
Disruption of Y chromosome expression in male lung cancer
GSE156247
Comparative transcriptome analysis of human skeletal muscle in response to cold acclimation and exercise training in human volunteers. [A294]
GSE156248
Comparative transcriptome analysis of human skeletal muscle in response to cold acclimation and exercise training in human volunteers. [A391]
GSE156249
Comparative transcriptome analysis of human skeletal muscle in response to cold acclimation and exercise training in human volunteers.
GSE163125
The whole transcriptome expression profiling of human macrophages; comparison between control and human milk exosomes capsulated oligosaccharides treatment
GSE163720
Association of RERG Expression to Female Survival Advantage in Malignant Pleural Mesothelioma I
GSE163722
Association of RERG Expression to Female Survival Advantage in Malignant Pleural Mesothelioma
GSE164934
Ayurvedic herbal preparation supplementation does not improve metabolic health in impaired glucose tolerance subjects; observations from a randomised placebo controlled trial
GSE167447
Expression data from normal human cerebellum
GSE175425
The whole transcriptome expression profiling of human SKOV3 comparison between control and CtBP1 KD, ctbp2 KD and CTBP1/2 DKD.
GSE189520
High calcium inducible genes in triple negative breast cancer cells
GSE211506
Gene expression data from Akkermansia perfusion trial
GSE214226
Elucidating the Role of the Desmosome Protein p53 Apoptosis Effector Related to PMP-22 in Growth Hormone Tumors
Relations
Alternative to
GPL15640 (Alternative CDF)
Alternative to
GPL17555 (alternative)
Alternative to
GPL18190 (Alternative CDF [HuGene11stv1_Hs_ENTREZG_15.1.0])
Alternative to
GPL16977 (Alternative CDF)
Alternative to
GPL20234 (alternative CDF [HuGene11stv1_Hs_ENSG version 18.0.0])
Alternative to
GPL20880 (alternative CDF [HuGene11st_Hs_ENTREZG_18.0.0])
Alternative to
GPL22286 (alternative CDF [HuGene11stv1_Hs_ENSG version 19.0.0])
Alternative to
GPL22654 (alternative CDF [HuGene11stv1_Hs_ENTREZG version 15.1.0]))
Data table header descriptions
ID
transcript_cluster_id
GB_LIST
GenBank and RefSeq Accessions from mrna_assignment column
SPOT_ID
genomic location of the transcript cluster in the version of the genome assembly used at annotation time. Coordinates are standard 1-based (length=stop-start+1).
seqname
chromosome number
RANGE_GB
NCBI RefSeq for chromosome of current build
RANGE_STRAND
strand (+|-)
RANGE_START
start (integer). Coordinates are standard 1-based (length=stop-start+1).
RANGE_STOP
stop (integer). Coordinates are standard 1-based (length=stop-start+1).
total_probes
Total number of probes contained by this transcript cluster.
gene_assignment
Gene information for each assigned mRNA for mRNAs that corresponds to known genes (multipart).
mrna_assignment
Description of the public mRNAs that should be detected by the sets within this transcript cluster based on sequence alignment (multipart).
category
Array design category of the transcript cluster
Data table
ID
GB_LIST
SPOT_ID
seqname
RANGE_GB
RANGE_STRAND
RANGE_START
RANGE_STOP
total_probes
gene_assignment
mrna_assignment
category
7896736
chr1:53049-54936
chr1
NC_000001.10
+
53049
54936
7
---
---
---
7896738
chr1:63015-63887
chr1
NC_000001.10
+
63015
63887
31
---
ENST00000328113 // ENSEMBL // cdna:pseudogene chromosome:GRCh37:15:102467008:102467910:-1 gene:ENSG00000183909 // chr1 // 100 // 100 // 31 // 31 // 0 /// ENST00000318181 // ENSEMBL // cdna:pseudogene chromosome:GRCh37:19:104601:105256:1 gene:ENSG00000176705 // chr1 // 100 // 100 // 31 // 31 // 0 /// ENST00000492842 // ENSEMBL // cdna:pseudogene chromosome:GRCh37:1:62948:63887:1 gene:ENSG00000240361 // chr1 // 100 // 100 // 31 // 31 // 0
main
7896740
NM_001005240 , NM_001004195 , NM_001005484 , BC136848 , BC136907
chr1:69091-70008
chr1
NC_000001.10
+
69091
70008
24
NM_001005240 // OR4F17 // olfactory receptor, family 4, subfamily F, member 17 // 19p13.3 // 81099 /// NM_001004195 // OR4F4 // olfactory receptor, family 4, subfamily F, member 4 // 15q26.3 // 26682 /// NM_001005484 // OR4F5 // olfactory receptor, family 4, subfamily F, member 5 // 1p36.33 // 79501 /// ENST00000318050 // OR4F17 // olfactory receptor, family 4, subfamily F, member 17 // 19p13.3 // 81099 /// ENST00000335137 // OR4F4 // olfactory receptor, family 4, subfamily F, member 4 // 15q26.3 // 26682 /// ENST00000326183 // OR4F5 // olfactory receptor, family 4, subfamily F, member 5 // 1p36.33 // 79501 /// BC136848 // OR4F17 // olfactory receptor, family 4, subfamily F, member 17 // 19p13.3 // 81099 /// BC136907 // OR4F4 // olfactory receptor, family 4, subfamily F, member 4 // 15q26.3 // 26682 /// ENST00000442916 // OR4F17 // olfactory receptor, family 4, subfamily F, member 17 // 19p13.3 // 81099
NM_001005240 // RefSeq // Homo sapiens olfactory receptor, family 4, subfamily F, member 17 (OR4F17), mRNA. // chr1 // 100 // 100 // 24 // 24 // 0 /// NM_001004195 // RefSeq // Homo sapiens olfactory receptor, family 4, subfamily F, member 4 (OR4F4), mRNA. // chr1 // 100 // 100 // 24 // 24 // 0 /// NM_001005484 // RefSeq // Homo sapiens olfactory receptor, family 4, subfamily F, member 5 (OR4F5), mRNA. // chr1 // 100 // 100 // 24 // 24 // 0 /// ENST00000318050 // ENSEMBL // Olfactory receptor 4F17 gene:ENSG00000176695 // chr1 // 100 // 100 // 24 // 24 // 0 /// ENST00000335137 // ENSEMBL // Olfactory receptor 4F4 gene:ENSG00000186092 // chr1 // 100 // 100 // 24 // 24 // 0 /// ENST00000326183 // ENSEMBL // Olfactory receptor 4F5 gene:ENSG00000177693 // chr1 // 100 // 100 // 24 // 24 // 0 /// BC136848 // GenBank // Homo sapiens olfactory receptor, family 4, subfamily F, member 17, mRNA (cDNA clone MGC:168462 IMAGE:9020839), complete cds. // chr1 // 100 // 100 // 24 // 24 // 0 /// BC136907 // GenBank // Homo sapiens olfactory receptor, family 4, subfamily F, member 4, mRNA (cDNA clone MGC:168521 IMAGE:9020898), complete cds. // chr1 // 100 // 100 // 24 // 24 // 0 /// ENST00000442916 // ENSEMBL // OR4F4 (Fragment) gene:ENSG00000176695 // chr1 // 100 // 88 // 21 // 21 // 0
main
7896742
BC118988 , AL137655
chr1:334129-334296
chr1
NC_000001.10
+
334129
334296
6
ENST00000388975 // SEPT14 // septin 14 // 7p11.2 // 346288 /// BC118988 // NCRNA00266 // non-protein coding RNA 266 // --- // 140849 /// AL137655 // LOC100134822 // similar to hCG1739109 // --- // 100134822
ENST00000388975 // ENSEMBL // Septin-14 gene:ENSG00000154997 // chr1 // 50 // 100 // 3 // 6 // 0 /// BC118988 // GenBank // Homo sapiens chromosome 20 open reading frame 69, mRNA (cDNA clone MGC:141807 IMAGE:40035995), complete cds. // chr1 // 100 // 100 // 6 // 6 // 0 /// AL137655 // GenBank // Homo sapiens mRNA; cDNA DKFZp434B2016 (from clone DKFZp434B2016). // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000428915 // ENSEMBL // cdna:known chromosome:GRCh37:10:38742109:38755311:1 gene:ENSG00000203496 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000455207 // ENSEMBL // cdna:known chromosome:GRCh37:1:334129:446155:1 gene:ENSG00000224813 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000455464 // ENSEMBL // cdna:known chromosome:GRCh37:1:334140:342806:1 gene:ENSG00000224813 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000440200 // ENSEMBL // cdna:known chromosome:GRCh37:1:536816:655580:-1 gene:ENSG00000230021 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000279067 // ENSEMBL // cdna:known chromosome:GRCh37:20:62921738:62934912:1 gene:ENSG00000149656 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000499986 // ENSEMBL // cdna:known chromosome:GRCh37:5:180717576:180761371:1 gene:ENSG00000248628 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000436899 // ENSEMBL // cdna:known chromosome:GRCh37:6:131910:144885:-1 gene:ENSG00000170590 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000432557 // ENSEMBL // cdna:known chromosome:GRCh37:8:132324:150572:-1 gene:ENSG00000250210 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000523795 // ENSEMBL // cdna:known chromosome:GRCh37:8:141690:150563:-1 gene:ENSG00000250210 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000490482 // ENSEMBL // cdna:known chromosome:GRCh37:8:149942:163324:-1 gene:ENSG00000223508 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000307499 // ENSEMBL // cdna:known supercontig::GL000227.1:57780:70752:-1 gene:ENSG00000229450 // chr1 // 100 // 100 // 6 // 6 // 0 /// ENST00000441245 // ENSEMBL // cdna:known chromosome:GRCh37:1:637316:655530:-1 gene:ENSG00000230021 // chr1 // 100 // 67 // 4 // 4 // 0 /// ENST00000425473 // ENSEMBL // cdna:known chromosome:GRCh37:20:62926294:62944485:1 gene:ENSG00000149656 // chr1 // 100 // 67 // 4 // 4 // 0 /// ENST00000471248 // ENSEMBL // cdna:known chromosome:GRCh37:1:110953:129173:-1 gene:ENSG00000238009 // chr1 // 75 // 67 // 3 // 4 // 0
main
7896744
NM_001005277 , NM_001005221 , NM_001005224 , NM_001005504 , BC137547
chr1:367659-368597
chr1
NC_000001.10
+
367659
368597
36
NM_001005277 // OR4F16 // olfactory receptor, family 4, subfamily F, member 16 // 1p36.33 // 81399 /// NM_001005221 // OR4F29 // olfactory receptor, family 4, subfamily F, member 29 // 1p36.33 // 729759 /// NM_001005224 // OR4F3 // olfactory receptor, family 4, subfamily F, member 3 // 5q35.3 // 26683 /// NM_001005504 // OR4F21 // olfactory receptor, family 4, subfamily F, member 21 // 8p23.3 // 441308 /// ENST00000320901 // OR4F21 // olfactory receptor, family 4, subfamily F, member 21 // 8p23.3 // 441308 /// BC137547 // OR4F3 // olfactory receptor, family 4, subfamily F, member 3 // 5q35.3 // 26683 /// BC137547 // OR4F16 // olfactory receptor, family 4, subfamily F, member 16 // 1p36.33 // 81399 /// BC137547 // OR4F29 // olfactory receptor, family 4, subfamily F, member 29 // 1p36.33 // 729759
NM_001005277 // RefSeq // Homo sapiens olfactory receptor, family 4, subfamily F, member 16 (OR4F16), mRNA. // chr1 // 100 // 100 // 36 // 36 // 0 /// NM_001005221 // RefSeq // Homo sapiens olfactory receptor, family 4, subfamily F, member 29 (OR4F29), mRNA. // chr1 // 100 // 100 // 36 // 36 // 0 /// NM_001005224 // RefSeq // Homo sapiens olfactory receptor, family 4, subfamily F, member 3 (OR4F3), mRNA. // chr1 // 100 // 100 // 36 // 36 // 0 /// NM_001005504 // RefSeq // Homo sapiens olfactory receptor, family 4, subfamily F, member 21 (OR4F21), mRNA. // chr1 // 89 // 100 // 32 // 36 // 0 /// ENST00000320901 // ENSEMBL // Olfactory receptor 4F21 gene:ENSG00000176269 // chr1 // 89 // 100 // 32 // 36 // 0 /// BC137547 // GenBank // Homo sapiens olfactory receptor, family 4, subfamily F, member 3, mRNA (cDNA clone MGC:169170 IMAGE:9021547), complete cds. // chr1 // 100 // 100 // 36 // 36 // 0 /// ENST00000426406 // ENSEMBL // cdna:known chromosome:GRCh37:1:367640:368634:1 gene:ENSG00000235249 // chr1 // 100 // 100 // 36 // 36 // 0 /// ENST00000332831 // ENSEMBL // cdna:known chromosome:GRCh37:1:621096:622034:-1 gene:ENSG00000185097 // chr1 // 100 // 100 // 36 // 36 // 0 /// ENST00000456475 // ENSEMBL // cdna:known chromosome:GRCh37:5:180794269:180795263:1 gene:ENSG00000230178 // chr1 // 100 // 100 // 36 // 36 // 0 /// ENST00000521196 // ENSEMBL // cdna:known chromosome:GRCh37:11:86612:87605:-1 gene:ENSG00000224777 // chr1 // 78 // 100 // 28 // 36 // 0
main
7896746
NC_001807 , AK074482
chr1:564951-565019
chr1
NC_000001.10
+
564951
565019
28
---
NC_001807 // GenBank // gi|17981852|ref|NC_001807.4|:4403-4470; gene=TRNM; product=tRNA-Met // chr1 // 78 // 96 // 21 // 27 // 0 /// AK074482 // GenBank // Homo sapiens cDNA fis, A-BNGH41000020, highly similar to Homo sapiens isolate EIJbIII-4-94 NADH dehydrogenase subunit 1 gene; mitochondrial gene for mitochondrial product. // chr1 // 79 // 100 // 22 // 28 // 0 /// ENST00000467964 // ENSEMBL // ncrna_pseudogene:Mt_tRNA_pseudogene chromosome:GRCh37:17:22025157:22025224:1 gene:ENSG00000240259 // chr1 // 26 // 96 // 7 // 27 // 1 /// ENST00000468070 // ENSEMBL // ncrna_pseudogene:Mt_tRNA_pseudogene chromosome:GRCh37:2:140977938:140978003:-1 gene:ENSG00000240717 // chr1 // 28 // 64 // 5 // 18 // 1
main
7896748
NC_001807
chr1:566062-566129
chr1
NC_000001.10
+
566062
566129
24
---
NC_001807 // GenBank // gi|17981852|ref|NC_001807.4|:5513-5580; gene=TRNW; product=tRNA-Trp // chr1 // 100 // 100 // 24 // 24 // 0
main
7896750
NC_001807 , AK172782
chr1:568069-568136
chr1
NC_000001.10
+
568069
568136
28
AK172782 // GPAM // glycerol-3-phosphate acyltransferase, mitochondrial // 10q25.2 // 57678
NC_001807 // GenBank // gi|17981852|ref|NC_001807.4|:7519-7586; gene=TRND; product=tRNA-Asp // chr1 // 86 // 100 // 24 // 28 // 0 /// AK172782 // GenBank // Homo sapiens cDNA FLJ23943 fis, clone HEP04035, highly similar to Glycerol-3-phosphate acyltransferase, mitochondrial precursor (EC 2.3.1.15). // chr1 // 100 // 25 // 7 // 7 // 0
main
7896752
NC_001807 , M37726
chr1:568844-568913
chr1
NC_000001.10
+
568844
568913
24
---
NC_001807 // GenBank // gi|17981852|ref|NC_001807.4|:8296-8365; gene=TRNK; product=tRNA-Lys // chr1 // 100 // 100 // 24 // 24 // 0 /// M37726 // GenBank // Human mitochondrial Lys-tRNA-aaa. // chr1 // 100 // 100 // 24 // 24 // 0
main
7896754
AK290103 , AK026836 , AK124970
chr1:721406-721912
chr1
NC_000001.10
+
721406
721912
23
AK290103 // LOC100287934 // hypothetical LOC100287934 // 1p36.33 // 100287934 /// ENST00000358533 // LOC100287934 // hypothetical LOC100287934 // 1p36.33 // 100287934
AK290103 // GenBank // Homo sapiens cDNA FLJ78588 complete cds. // chr1 // 87 // 100 // 20 // 23 // 0 /// ENST00000358533 // ENSEMBL // Transmembrane protein FLJ78588 gene:ENSG00000197049 // chr1 // 100 // 100 // 23 // 23 // 0 /// AK026836 // GenBank // Homo sapiens cDNA: FLJ23183 fis, clone LNG11477. // chr1 // 100 // 100 // 23 // 23 // 0 /// AK124970 // GenBank // Homo sapiens cDNA FLJ42980 fis, clone BRTHA2006735. // chr1 // 100 // 17 // 4 // 4 // 0 /// ENST00000449219 // ENSEMBL // cdna:known chromosome:GRCh37:1:224183659:224197405:1 gene:ENSG00000185495 // chr1 // 100 // 17 // 4 // 4 // 0
main
7896756
BC037297 , BC118644
chr1:752751-755214
chr1
NC_000001.10
+
752751
755214
26
BC037297 // FAM87A // family with sequence similarity 87, member A // 8p23.3 // 157693
BC037297 // GenBank // Homo sapiens cDNA clone IMAGE:4821387. // chr1 // 88 // 100 // 23 // 26 // 0 /// ENST00000330148 // ENSEMBL // hypothetical protein gene:ENSG00000182366 // chr1 // 88 // 100 // 23 // 26 // 0 /// ENST00000523195 // ENSEMBL // cdna:known chromosome:GRCh37:8:326043:333174:-1 gene:ENSG00000182366 // chr1 // 88 // 96 // 22 // 25 // 0 /// BC118644 // GenBank // Homo sapiens cDNA clone IMAGE:40030978. // chr1 // 90 // 38 // 9 // 10 // 0
main
7896759
AK096570
chr1:791391-793751
chr1
NC_000001.10
+
791391
793751
12
AK096570 // LOC643837 // hypothetical LOC643837 // 1p36.33 // 643837
AK096570 // GenBank // Homo sapiens cDNA FLJ39251 fis, clone OCBBF2008701. // chr1 // 100 // 100 // 12 // 12 // 0
main
7896761
NM_152486 , NM_015658 , BC024295
chr1:860530-880512
chr1
NC_000001.10
+
860530
880512
42
NM_152486 // SAMD11 // sterile alpha motif domain containing 11 // 1p36.33 // 148398 /// NM_015658 // NOC2L // nucleolar complex associated 2 homolog (S. cerevisiae) // 1p36.33 // 26155 /// ENST00000342066 // SAMD11 // sterile alpha motif domain containing 11 // 1p36.33 // 148398 /// ENST00000327044 // NOC2L // nucleolar complex associated 2 homolog (S. cerevisiae) // 1p36.33 // 26155 /// BC024295 // SAMD11 // sterile alpha motif domain containing 11 // 1p36.33 // 148398 /// ENST00000443100 // SAMD11 // sterile alpha motif domain containing 11 // 1p36.33 // 148398 /// ENST00000420190 // SAMD11 // sterile alpha motif domain containing 11 // 1p36.33 // 148398 /// ENST00000437963 // SAMD11 // sterile alpha motif domain containing 11 // 1p36.33 // 148398
NM_152486 // RefSeq // Homo sapiens sterile alpha motif domain containing 11 (SAMD11), mRNA. // chr1 // 100 // 100 // 42 // 42 // 0 /// NM_015658 // RefSeq // Homo sapiens nucleolar complex associated 2 homolog (S. cerevisiae) (NOC2L), mRNA. // chr1 // 100 // 2 // 2 // 1 // 0 /// ENST00000342066 // ENSEMBL // Isoform 3 of Sterile alpha motif domain-containing protein 11 gene:ENSG00000187634 // chr1 // 100 // 100 // 42 // 42 // 0 /// ENST00000327044 // ENSEMBL // Nucleolar complex protein 2 homolog gene:ENSG00000188976 // chr1 // 100 // 2 // 2 // 1 // 0 /// BC024295 // GenBank // Homo sapiens sterile alpha motif domain containing 11, mRNA (cDNA clone MGC:39333 IMAGE:3354502), complete cds. // chr1 // 100 // 71 // 30 // 30 // 0 /// ENST00000443100 // ENSEMBL // Isoform 2 of Sterile alpha motif domain-containing protein 11 gene:ENSG00000187634 // chr1 // 100 // 90 // 38 // 38 // 0 /// ENST00000420190 // ENSEMBL // Sterile alpha motif domain containing 11 gene:ENSG00000187634 // chr1 // 100 // 24 // 10 // 10 // 0 /// ENST00000437963 // ENSEMBL // Sterile alpha motif domain containing 11 gene:ENSG00000187634 // chr1 // 100 // 14 // 6 // 6 // 0 /// ENST00000478729 // ENSEMBL // cdna:known chromosome:GRCh37:1:875726:877553:1 gene:ENSG00000187634 // chr1 // 100 // 12 // 5 // 5 // 0 /// ENST00000466827 // ENSEMBL // cdna:known chromosome:GRCh37:1:877483:878182:1 gene:ENSG00000187634 // chr1 // 100 // 10 // 4 // 4 // 0 /// ENST00000464948 // ENSEMBL // cdna:known chromosome:GRCh37:1:877546:878272:1 gene:ENSG00000187634 // chr1 // 100 // 10 // 4 // 4 // 0
main
7896779
NM_198317 , AY423763
chr1:895967-901099
chr1
NC_000001.10
+
895967
901099
47
NM_198317 // KLHL17 // kelch-like 17 (Drosophila) // 1p36.33 // 339451 /// ENST00000338591 // KLHL17 // kelch-like 17 (Drosophila) // 1p36.33 // 339451 /// AY423763 // KLHL17 // kelch-like 17 (Drosophila) // 1p36.33 // 339451 /// ENST00000455747 // KLHL17 // kelch-like 17 (Drosophila) // 1p36.33 // 339451
NM_198317 // RefSeq // Homo sapiens kelch-like 17 (Drosophila) (KLHL17), mRNA. // chr1 // 100 // 83 // 39 // 39 // 0 /// ENST00000338591 // ENSEMBL // Kelch-like protein 17 gene:ENSG00000187961 // chr1 // 100 // 83 // 39 // 39 // 0 /// AY423763 // GenBank // Homo sapiens actinfilin mRNA, complete cds. // chr1 // 100 // 83 // 39 // 39 // 0 /// ENST00000455747 // ENSEMBL // KLHL17 protein gene:ENSG00000187961 // chr1 // 100 // 30 // 14 // 14 // 0 /// ENST00000473277 // ENSEMBL // cdna:known chromosome:GRCh37:1:895967:901095:1 gene:ENSG00000187961 // chr1 // 100 // 70 // 33 // 33 // 0 /// ENST00000463212 // ENSEMBL // cdna:known chromosome:GRCh37:1:896829:897858:1 gene:ENSG00000187961 // chr1 // 100 // 32 // 15 // 15 // 0 /// ENST00000466300 // ENSEMBL // cdna:known chromosome:GRCh37:1:898107:899910:1 gene:ENSG00000187961 // chr1 // 100 // 28 // 13 // 13 // 0
main
7896798
NM_032129 , NM_001160184 , BC101387
chr1:901877-910488
chr1
NC_000001.10
+
901877
910488
43
NM_032129 // PLEKHN1 // pleckstrin homology domain containing, family N member 1 // 1p36.33 // 84069 /// NM_001160184 // PLEKHN1 // pleckstrin homology domain containing, family N member 1 // 1p36.33 // 84069 /// ENST00000379410 // PLEKHN1 // pleckstrin homology domain containing, family N member 1 // 1p36.33 // 84069 /// ENST00000379407 // PLEKHN1 // pleckstrin homology domain containing, family N member 1 // 1p36.33 // 84069 /// BC101387 // PLEKHN1 // pleckstrin homology domain containing, family N member 1 // 1p36.33 // 84069 /// ENST00000379409 // PLEKHN1 // pleckstrin homology domain containing, family N member 1 // 1p36.33 // 84069
NM_032129 // RefSeq // Homo sapiens pleckstrin homology domain containing, family N member 1 (PLEKHN1), transcript variant 1, mRNA. // chr1 // 100 // 91 // 39 // 39 // 0 /// NM_001160184 // RefSeq // Homo sapiens pleckstrin homology domain containing, family N member 1 (PLEKHN1), transcript variant 2, mRNA. // chr1 // 100 // 91 // 39 // 39 // 0 /// ENST00000379410 // ENSEMBL // Isoform 2 of Pleckstrin homology domain-containing family N member 1 gene:ENSG00000187583 // chr1 // 100 // 91 // 39 // 39 // 0 /// ENST00000379407 // ENSEMBL // Isoform 3 of Pleckstrin homology domain-containing family N member 1 gene:ENSG00000187583 // chr1 // 100 // 91 // 39 // 39 // 0 /// BC101387 // GenBank // Homo sapiens pleckstrin homology domain containing, family N member 1, mRNA (cDNA clone MGC:120616 IMAGE:40026404), complete cds. // chr1 // 95 // 95 // 39 // 41 // 0 /// ENST00000379409 // ENSEMBL // Isoform 1 of Pleckstrin homology domain-containing family N member 1 gene:ENSG00000187583 // chr1 // 100 // 100 // 43 // 43 // 0 /// ENST00000480267 // ENSEMBL // cdna:known chromosome:GRCh37:1:906255:906903:1 gene:ENSG00000187583 // chr1 // 100 // 23 // 10 // 10 // 0 /// ENST00000491024 // ENSEMBL // cdna:known chromosome:GRCh37:1:908892:911245:1 gene:ENSG00000187583 // chr1 // 100 // 19 // 8 // 8 // 0
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7896817
NM_005101 , M13755
chr1:948803-949920
chr1
NC_000001.10
+
948803
949920
27
NM_005101 // ISG15 // ISG15 ubiquitin-like modifier // 1p36.33 // 9636 /// ENST00000379389 // ISG15 // ISG15 ubiquitin-like modifier // 1p36.33 // 9636 /// M13755 // ISG15 // ISG15 ubiquitin-like modifier // 1p36.33 // 9636
NM_005101 // RefSeq // Homo sapiens ISG15 ubiquitin-like modifier (ISG15), mRNA. // chr1 // 100 // 100 // 27 // 27 // 0 /// ENST00000379389 // ENSEMBL // Ubiquitin-like protein ISG15 gene:ENSG00000187608 // chr1 // 100 // 100 // 27 // 27 // 0 /// M13755 // GenBank // Human interferon-induced 17-kDa/15-kDa protein mRNA, complete cds. // chr1 // 88 // 96 // 23 // 26 // 0
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7896822
NM_198576 , AB191264
chr1:955503-991496
chr1
NC_000001.10
+
955503
991496
49
NM_198576 // AGRN // agrin // 1p36.33 // 375790 /// ENST00000379370 // AGRN // agrin // 1p36.33 // 375790 /// AB191264 // AGRN // agrin // 1p36.33 // 375790 /// ENST00000379364 // AGRN // agrin // 1p36.33 // 375790 /// ENST00000419249 // AGRN // agrin // 1p36.33 // 375790
NM_198576 // RefSeq // Homo sapiens agrin (AGRN), mRNA. // chr1 // 100 // 100 // 49 // 49 // 0 /// ENST00000379370 // ENSEMBL // Agrin gene:ENSG00000188157 // chr1 // 100 // 100 // 49 // 49 // 0 /// AB191264 // GenBank // Homo sapiens AGRN mRNA for agrin, complete cds. // chr1 // 98 // 100 // 48 // 49 // 0 /// ENST00000379364 // ENSEMBL // Agrin gene:ENSG00000188157 // chr1 // 100 // 100 // 49 // 49 // 0 /// ENST00000419249 // ENSEMBL // Agrin gene:ENSG00000188157 // chr1 // 100 // 12 // 6 // 6 // 0 /// ENST00000461111 // ENSEMBL // cdna:known chromosome:GRCh37:1:987366:991492:1 gene:ENSG00000188157 // chr1 // 100 // 20 // 10 // 10 // 0 /// ENST00000479707 // ENSEMBL // cdna:known chromosome:GRCh37:1:980779:981729:1 gene:ENSG00000188157 // chr1 // 100 // 10 // 5 // 5 // 0 /// ENST00000469403 // ENSEMBL // cdna:known chromosome:GRCh37:1:970247:976777:1 gene:ENSG00000188157 // chr1 // 100 // 6 // 3 // 3 // 0 /// ENST00000466223 // ENSEMBL // cdna:known chromosome:GRCh37:1:982581:983245:1 gene:ENSG00000188157 // chr1 // 100 // 6 // 3 // 3 // 0
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7896859
NR_029639
chr1:1102484-1102578
chr1
NC_000001.10
+
1102484
1102578
25
NR_029639 // MIR200B // microRNA 200b // 1p36.33 // 406984
NR_029639 // RefSeq // Homo sapiens microRNA 200b (MIR200B), microRNA. // chr1 // 100 // 100 // 25 // 25 // 0 /// hsa-mir-200b // miRBase Micro RNA Database // MI0000342 Homo sapiens miR-200b stem-loop // chr1 // 100 // 100 // 25 // 25 // 0
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7896861
NR_029834
chr1:1103243-1103332
chr1
NC_000001.10
+
1103243
1103332
25
NR_029834 // MIR200A // microRNA 200a // 1p36.33 // 406983
NR_029834 // RefSeq // Homo sapiens microRNA 200a (MIR200A), microRNA. // chr1 // 100 // 100 // 25 // 25 // 0 /// hsa-mir-200a // miRBase Micro RNA Database // MI0000737 Homo sapiens miR-200a stem-loop // chr1 // 100 // 100 // 25 // 25 // 0
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7896863
NR_029957
chr1:1104373-1104471
chr1
NC_000001.10
+
1104373
1104471
18
NR_029957 // MIR429 // microRNA 429 // 1p36.33 // 554210
NR_029957 // RefSeq // Homo sapiens microRNA 429 (MIR429), microRNA. // chr1 // 100 // 89 // 16 // 16 // 0 /// hsa-mir-429 // miRBase Micro RNA Database // MI0001641 Homo sapiens miR-429 stem-loop // chr1 // 100 // 89 // 16 // 16 // 0
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Total number of rows: 33297 Table truncated, full table size 47373 Kbytes .
Supplementary data files not provided