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Platform GPL127 Query DataSets for GPL127
Status Public on Oct 01, 2002
Title Atlas Human 1.2 Array (Cat. #7850-1)
Technology type spotted DNA/cDNA
Distribution commercial
Organism Homo sapiens
Manufacturer BD Biosciences Clontech
Manufacture protocol see manufacturer's web site
 
Description Nylon, broad-coverage human cDNA array. The cDNA fragments (200-600 bp) are PCR-amplified using gene-specific primers, and are selected so that they lack repetitive elements and have minimal homology with other genes on the array.

Also see Cat# 634527 at http://www.clontech.com/clontech/atlas/genelists/index.shtml
 
Web link http://www.clontech.com/atlas/index.shtml
Submission date Apr 24, 2002
Last update date Apr 09, 2008
Organization BD Biosciences Clontech
E-mail(s) tech@clontech.com
Phone 877-232-8995
URL http://www.clontech.com
Street address 1020 East Meadow Circle
City Palo Alto
State/province CA
ZIP/Postal code 94303-4230
Country USA
 
Samples (187) GSM11427, GSM11428, GSM11429, GSM11430, GSM11431, GSM70423 
Series (7)
GSE751 HEVEC dedifferentiation
GSE3168 Genes modulated by DNA demethylation in UM1 cells
GSE4234 Acute and Chronic Environmental Tobacco Smoke Condensate Exposure to Primary Human Bronchial Epithelial Cells

Data table header descriptions
ID unique reference number used by BD Biosciences Clontech to identify each gene in collection
GENE_NAME set of names commonly used for the gene, based on the current literature
COORDINATE array coordinate
GB_LIST GenBank accession number
SP LIST SwissProt accession number
GENE Entrez GENE ID
DESC description
CLASSIFICATION set of functional classifications for the gene

Data table
ID GENE_NAME COORDINATE GB_LIST SP LIST GENE DESC CLASSIFICATION
1 interleukin 7 receptor alpha subunit (IL7R-alpha; IL7R); CDW127 antigen E14k M29696 P16871 3575 interleukin 7 receptor FR02 SB00
2 interferon gamma (IFN-gamma; IFNG) F06i X01992, M29383 P01579 interferon gamma precursor (IFN-gamma; IFNG); immune interferon FS04 SF00
3 interleukin 7 (IL7) F07i J04156 P13232 3574 interleukin 7 FS04 SF00
4 myc proto-oncogene A12c V00568 P01106, P01107 4609 v-myc avian myelocytomatosis viral oncogene homolog FG00 FB03 FT00 FO00 SN00
5 interleukin 2 receptor alpha subunit (IL2 receptor alpha; IL2RA); TAC antigen; CD25 antigen E01l X01057, X01058, X01402 P01589 3559 interleukin 2 receptor, alpha FR02 SB00
6 interleukin 2 (IL2); T-cell growth factor (TCGF) F08i A14844 P01585 interleukin-2 precursor (IL-2); T-cell growth factor (TCGF) FS04 SF00
7 erbB3 proto-oncogene; HER3 A12e M29366, M34309 P21860 2065 v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 FG00 FT00 FR01 FV01 SB00
8 insulin-like growth factor I receptor (IGF1R) C13f X04434, M24599 P08069 3480 insulin-like growth factor 1 receptor FO02 FR01 FT00 FV01 SB00
9 insulin-like growth factor II (IGF2); somatomedin A F06d M29645 P01344 3481 insulin-like growth factor 2 (somatomedin A) FS02 SF00
10 nitric oxide synthase 2A (NOS2A); inducible hepatocyte NOS (HEP-NOS) C02k L09210 P35228, Q16692, O60757, Q16263 4843 nitric oxide synthase 2A (inducible, hepatocytes) FO10 SC00
11 glutamate receptor 1 (GLUR1; GLURA); ionotropic glutamate receptor AMPA 1 (GRIA1) D10c M64752 P42261 2890 glutamate receptor, ionotropic, AMPA 1 FR04 FI03 SB00
12 colony-stimulating factor 1 receptor (CSF1R); fms proto-oncogene A06e X03663 P07333 1436 colony stimulating factor 1 receptor, formerly McDonough feline sarcoma viral (v-fms) oncogene homolog FG00 FT00 FR01 FV01 SB00
13 tumor necrosis factor receptor superfamily member 1B (TNFRSF1B); tumor necrosis factor receptor 2 (TNFR2); tumor necrosis factor beta receptor (TNFBR); CD120B antigen C07g M32315, M55994 P20333 7133 tumor necrosis factor receptor superfamily, member 1B FO02 FT00 FR01 FV06 FA00 SB00
14 p53-binding mouse double minute 2 homolog (MDM2) A06a Z12020, M92424 Q00987, Q13226 4193 mouse double minute 2, human homolog of; p53-binding protein FG00 FT00 FO00 FC00 SN00
15 platelet-derived growth factor beta subunit (PDGF-beta; PDGFB); sis proto-oncogene F07d X02811, X02744, M12783, M16288 P01127, P78431 5155 platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog) FG00 FS02 SF00
16 liver glyceraldehyde 3-phosphate dehydrogenase (GAPDH; G3PDH) G27 X01677 P04406 2597 glyceraldehyde-3-phosphate dehydrogenase FL02 FL03 FY02 SC00 SN00
17 transferrin receptor (TFRC); CD71 antigen B08e X01060 P02786 7037 transferrin receptor (p90, CD71) FT00 FR05 FV07 FA00 SB00 SF00
18 interleukin 1 alpha (IL1-alpha; IL1A) F09i X02851 P01583 3552 interleukin 1, alpha FS04 SF00
19 interleukin 1 beta (IL1-beta ; IL1B); catabolin F10i K02770 P01584 3553 interleukin 1, beta FS04 SF00
20 interleukin 3 (IL3); multiple colony-stimulating factor (multi-CSF) F11i M14743, M17115 P08700 3562 interleukin 3 (colony-stimulating factor, multiple) FS04 SF00

Total number of rows: 1185

Table truncated, full table size 182 Kbytes.






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