GEO help: Mouse over screen elements for information.
Status
Public on Oct 01, 2002
Title
Atlas Human 1.2 Array (Cat. #7850-1)
Technology type
spotted DNA/cDNA
Distribution
commercial
Organism
Homo sapiens
Manufacturer
BD Biosciences Clontech
Manufacture protocol
see manufacturer's web site
Description
Nylon, broad-coverage human cDNA array. The cDNA fragments (200-600 bp) are PCR-amplified using gene-specific primers, and are selected so that they lack repetitive elements and have minimal homology with other genes on the array. Also see Cat# 634527 at http://www.clontech.com/clontech/atlas/genelists/index.shtml
Web link
http://www.clontech.com/atlas/index.shtml
Submission date
Apr 24, 2002
Last update date
Apr 09, 2008
Organization
BD Biosciences Clontech
E-mail(s)
tech@clontech.com
Phone
877-232-8995
URL
http://www.clontech.com
Street address
1020 East Meadow Circle
City
Palo Alto
State/province
CA
ZIP/Postal code
94303-4230
Country
USA
Samples (187)
GSM11427 , GSM11428 , GSM11429 , GSM11430 , GSM11431 , GSM70423
GSM70434 ,
GSM70656 ,
GSM96359 ,
GSM96484 ,
GSM96485 ,
GSM96486 ,
GSM96487 ,
GSM96488 ,
GSM96489 ,
GSM96490 ,
GSM96491 ,
GSM96492 ,
GSM96493 ,
GSM96494 ,
GSM96495 ,
GSM96496 ,
GSM96497 ,
GSM96498 ,
GSM96499 ,
GSM96500 ,
GSM96501 ,
GSM96502 ,
GSM96503 ,
GSM96504 ,
GSM96505 ,
GSM96506 ,
GSM100336 ,
GSM105631 ,
GSM105632 ,
GSM105633 ,
GSM105634 ,
GSM105636 ,
GSM105637 ,
GSM105638 ,
GSM105639 ,
GSM105640 ,
GSM105641 ,
GSM105642 ,
GSM105643 ,
GSM105644 ,
GSM105645 ,
GSM105646 ,
GSM105647 ,
GSM105648 ,
GSM105649 ,
GSM105650 ,
GSM105651 ,
GSM105652 ,
GSM105653 ,
GSM105654 ,
GSM105655 ,
GSM105656 ,
GSM105657 ,
GSM105658 ,
GSM105659 ,
GSM105660 ,
GSM105661 ,
GSM105662 ,
GSM105663 ,
GSM105664 ,
GSM105665 ,
GSM105666 ,
GSM105667 ,
GSM105668 ,
GSM105669 ,
GSM105670 ,
GSM105671 ,
GSM105672 ,
GSM105673 ,
GSM105674 ,
GSM105675 ,
GSM105676 ,
GSM105677 ,
GSM105678 ,
GSM105679 ,
GSM105680 ,
GSM105681 ,
GSM105682 ,
GSM105683 ,
GSM105684 ,
GSM105685 ,
GSM105686 ,
GSM105687 ,
GSM105688 ,
GSM105689 ,
GSM105690 ,
GSM105691 ,
GSM105692 ,
GSM105693 ,
GSM105694 ,
GSM105695 ,
GSM105696 ,
GSM105697 ,
GSM105698 ,
GSM105699 ,
GSM105700 ,
GSM105701 ,
GSM105703 ,
GSM105704 ,
GSM105705 ,
GSM105706 ,
GSM105707 ,
GSM105708 ,
GSM105709 ,
GSM105710 ,
GSM105711 ,
GSM105712 ,
GSM105713 ,
GSM105714 ,
GSM105715 ,
GSM105716 ,
GSM105717 ,
GSM105718 ,
GSM105719 ,
GSM105720 ,
GSM105721 ,
GSM105722 ,
GSM105723 ,
GSM105724 ,
GSM105725 ,
GSM105726 ,
GSM105727 ,
GSM105728 ,
GSM105729 ,
GSM105730 ,
GSM105731 ,
GSM105732 ,
GSM105733 ,
GSM105734 ,
GSM105735 ,
GSM105736 ,
GSM105737 ,
GSM105738 ,
GSM105739 ,
GSM105740 ,
GSM105741 ,
GSM105742 ,
GSM105743 ,
GSM105744 ,
GSM105745 ,
GSM105746 ,
GSM105747 ,
GSM105748 ,
GSM105749 ,
GSM105750 ,
GSM105751 ,
GSM105752 ,
GSM105753 ,
GSM105754 ,
GSM105755 ,
GSM105756 ,
GSM105757 ,
GSM105758 ,
GSM105759 ,
GSM105760 ,
GSM105761 ,
GSM105762 ,
GSM105763 ,
GSM105764 ,
GSM106286 ,
GSM106287 ,
GSM106288 ,
GSM106289 ,
GSM106290 ,
GSM106291 ,
GSM106292 ,
GSM106293 ,
GSM106294 ,
GSM106295 ,
GSM184165 ,
GSM184166 ,
GSM184167 ,
GSM184168 ,
GSM184169 ,
GSM184171 ,
GSM239103 ,
GSM239104 ,
GSM239105 ,
GSM239106 ,
GSM239107 ,
GSM239108
Series (7)
GSE751
HEVEC dedifferentiation
GSE3168
Genes modulated by DNA demethylation in UM1 cells
GSE4234
Acute and Chronic Environmental Tobacco Smoke Condensate Exposure to Primary Human Bronchial Epithelial Cells
GSE4478
Indicators of exposure to biological threat agents using host gene profiles in peripheral blood mononuclear cells
GSE4704
Myocardial gene expression of hibernating and control tissue from patients with ischemic left ventricular dysfunction
GSE7601
Expression of inflammatory host genes in Chlamydia trachomatis infected human monocytes
GSE9391
Gene expression in brain following stroke
Data table header descriptions
ID
unique reference number used by BD Biosciences Clontech to identify each gene in collection
GENE_NAME
set of names commonly used for the gene, based on the current literature
COORDINATE
array coordinate
GB_LIST
GenBank accession number
SP LIST
SwissProt accession number
GENE
Entrez GENE ID
DESC
description
CLASSIFICATION
set of functional classifications for the gene
Data table
ID
GENE_NAME
COORDINATE
GB_LIST
SP LIST
GENE
DESC
CLASSIFICATION
1
interleukin 7 receptor alpha subunit (IL7R-alpha; IL7R); CDW127 antigen
E14k
M29696
P16871
3575
interleukin 7 receptor
FR02 SB00
2
interferon gamma (IFN-gamma; IFNG)
F06i
X01992 , M29383
P01579
interferon gamma precursor (IFN-gamma; IFNG); immune interferon
FS04 SF00
3
interleukin 7 (IL7)
F07i
J04156
P13232
3574
interleukin 7
FS04 SF00
4
myc proto-oncogene
A12c
V00568
P01106 , P01107
4609
v-myc avian myelocytomatosis viral oncogene homolog
FG00 FB03 FT00 FO00 SN00
5
interleukin 2 receptor alpha subunit (IL2 receptor alpha; IL2RA); TAC antigen; CD25 antigen
E01l
X01057 , X01058 , X01402
P01589
3559
interleukin 2 receptor, alpha
FR02 SB00
6
interleukin 2 (IL2); T-cell growth factor (TCGF)
F08i
A14844
P01585
interleukin-2 precursor (IL-2); T-cell growth factor (TCGF)
FS04 SF00
7
erbB3 proto-oncogene; HER3
A12e
M29366 , M34309
P21860
2065
v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
FG00 FT00 FR01 FV01 SB00
8
insulin-like growth factor I receptor (IGF1R)
C13f
X04434 , M24599
P08069
3480
insulin-like growth factor 1 receptor
FO02 FR01 FT00 FV01 SB00
9
insulin-like growth factor II (IGF2); somatomedin A
F06d
M29645
P01344
3481
insulin-like growth factor 2 (somatomedin A)
FS02 SF00
10
nitric oxide synthase 2A (NOS2A); inducible hepatocyte NOS (HEP-NOS)
C02k
L09210
P35228 , Q16692 , O60757 , Q16263
4843
nitric oxide synthase 2A (inducible, hepatocytes)
FO10 SC00
11
glutamate receptor 1 (GLUR1; GLURA); ionotropic glutamate receptor AMPA 1 (GRIA1)
D10c
M64752
P42261
2890
glutamate receptor, ionotropic, AMPA 1
FR04 FI03 SB00
12
colony-stimulating factor 1 receptor (CSF1R); fms proto-oncogene
A06e
X03663
P07333
1436
colony stimulating factor 1 receptor, formerly McDonough feline sarcoma viral (v-fms) oncogene homolog
FG00 FT00 FR01 FV01 SB00
13
tumor necrosis factor receptor superfamily member 1B (TNFRSF1B); tumor necrosis factor receptor 2 (TNFR2); tumor necrosis factor beta receptor (TNFBR); CD120B antigen
C07g
M32315 , M55994
P20333
7133
tumor necrosis factor receptor superfamily, member 1B
FO02 FT00 FR01 FV06 FA00 SB00
14
p53-binding mouse double minute 2 homolog (MDM2)
A06a
Z12020 , M92424
Q00987 , Q13226
4193
mouse double minute 2, human homolog of; p53-binding protein
FG00 FT00 FO00 FC00 SN00
15
platelet-derived growth factor beta subunit (PDGF-beta; PDGFB); sis proto-oncogene
F07d
X02811 , X02744 , M12783 , M16288
P01127 , P78431
5155
platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog)
FG00 FS02 SF00
16
liver glyceraldehyde 3-phosphate dehydrogenase (GAPDH; G3PDH)
G27
X01677
P04406
2597
glyceraldehyde-3-phosphate dehydrogenase
FL02 FL03 FY02 SC00 SN00
17
transferrin receptor (TFRC); CD71 antigen
B08e
X01060
P02786
7037
transferrin receptor (p90, CD71)
FT00 FR05 FV07 FA00 SB00 SF00
18
interleukin 1 alpha (IL1-alpha; IL1A)
F09i
X02851
P01583
3552
interleukin 1, alpha
FS04 SF00
19
interleukin 1 beta (IL1-beta ; IL1B); catabolin
F10i
K02770
P01584
3553
interleukin 1, beta
FS04 SF00
20
interleukin 3 (IL3); multiple colony-stimulating factor (multi-CSF)
F11i
M14743 , M17115
P08700
3562
interleukin 3 (colony-stimulating factor, multiple)
FS04 SF00
Total number of rows: 1185 Table truncated, full table size 182 Kbytes .
Supplementary data files not provided