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Platform GPL1294 Query DataSets for GPL1294
Status Public on Jun 18, 2004
Title Hitachisoft AceGene Human Oligo Chip 30K Subset B
Technology type spotted oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Hitachisoft
Manufacture protocol see manufacturer's web site
 
Description Hitachisoft AceGene Human Oligo Chip 30K Subset B
 
Web link http://hitachisoft.jp/dnasis/ex_acegene/
Submission date Jun 16, 2004
Last update date Jun 04, 2012
Organization Hitachi Software Engineering Co., Ltd.
E-mail(s) dnachip@hitachisoft.jp
Phone +81-45-500-5111
Street address
City 1-1-43,Suehiro-cho,Tsurumi-ku,Yokohama
ZIP/Postal code 230-0045
Country Japan
 
Samples (7) GSM76905, GSM76906, GSM76907, GSM76908, GSM76909, GSM76910 
Series (1)
GSE3408 Novel Roles of Osteopontin and CXC Chemokine Ligand 7 in the Defense against Mycobacterial Infection

Data table header descriptions
ID
Description Description of the probe
CDS_ID Aceesion number of corresponding public database (In the case of GenBank and RefSeq, the position of the CDS within the record is shown after an underscore)
GB_ACC GenBank accession number
Entrez Gene ID Entrez Gene ID
Symbol Symbol of the gene derived from Entrez Gene ID
ORF
GeneName Gene Name derived from Entrez Gene ID
IPI ID IPI ID derived from Entrez Gene ID
GO Molecular Function GO Molecular Function derived from Entrez Gene ID
GO Biological Process GO Biological Process derived from Entrez Gene ID
GO Cellular Component GO Cellular Component derived from Entrez Gene ID
Gene ID open reading frame
SPOT_ID spot identifier

Data table
ID Description CDS_ID GB_ACC Entrez Gene ID Symbol ORF GeneName IPI ID GO Molecular Function GO Biological Process GO Cellular Component Gene ID SPOT_ID
AGhsB010101 Quality Check Control 07 --Quality Check Control 07
AGhsB010102 knp3 AB001535_1 AB001535 7226 TRPM2 TRPM2 transient receptor potential cation channel, subfamily M, member 2 IPI00014911.1, IPI00412399.3, IPI00480087.1, IPI00784383.1, IPI00788735.1, IPI00789240.1, IPI00790593.1 sodium ion binding, calcium ion binding, hydrolase activity, ADP-ribose diphosphatase activity, calcium channel activity, sodium channel activity, ion channel activity calcium ion transport, sodium ion transport, ion transport integral to plasma membrane, membrane 7226
AGhsB010103 ensembl prediction ENSG00000087255 80205 CHD9 CHD9 chromodomain helicase DNA binding protein 9 IPI00005929.1, IPI00166739.1, IPI00383105.3, IPI00643741.2, IPI00746795.1, IPI00796585.1 chromatin binding, DNA binding, nucleotide binding, ATP binding, protein binding, helicase activity, hydrolase activity regulation of transcription, DNA-dependent, chromatin assembly or disassembly, chromatin modification, transcription nucleus, chromatin, integral to membrane, membrane 80205
AGhsB010104 kiaa0346 AB002344_1 AB002344 23135 JMJD3 JMJD3 jumonji domain containing 3 IPI00550090.5, IPI00735757.1 23135
AGhsB010105 ensembl prediction ENSG00000131388 23243 ANKRD28 ANKRD28 ankyrin repeat domain 28 IPI00477505.3, IPI00514769.3, IPI00791281.1, IPI00792402.1, IPI00795452.1 23243
AGhsB010106 ensembl prediction ENSG00000048014 6392 SDHD SDHD succinate dehydrogenase complex, subunit D, integral membrane protein IPI00297325.3, IPI00784117.1 iron ion binding, metal ion binding, heme binding, electron carrier activity, succinate dehydrogenase activity tricarboxylic acid cycle, transport, electron transport mitochondrial inner membrane, mitochondrial envelope, mitochondrion, integral to membrane, membrane 6392
AGhsB010107 cystatin a (stefin a) BC010379_1 BC010379 1475 CSTA CSTA cystatin A (stefin A) IPI00032325.1, IPI00794081.1 protein binding, bridging, cysteine protease inhibitor activity, structural molecule activity keratinocyte differentiation, peptide cross-linking cornified envelope, intracellular 1475
AGhsB010108 ensembl prediction ENSG00000049759 23327 NEDD4L NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like IPI00023287.4, IPI00163321.5, IPI00166830.3, IPI00304945.1, IPI00478559.2, IPI00640924.1, IPI00641642.1, IPI00642276.1, IPI00643338.1, IPI00643856.1, IPI00644256.1, IPI00644367.1, IPI00645053.1, IPI00645056.1, IPI00816339.1, IPI00816420.1 sodium channel regulator activity, protein binding, ligase activity, ubiquitin-protein ligase activity positive regulation of endocytosis, regulation of protein catabolic process, sodium ion homeostasis, water homeostasis, protein ubiquitination, protein modification process, sodium ion transport, excretion, response to metal ion intracellular 23327
AGhsB010109 kiaa0476 protein; kiaa0476 AB007945_1 AB007945 9909 DENND4B DENND4B DENN/MADD domain containing 4B IPI00006645.8, IPI00787643.1 9909
AGhsB010110 mdc protein; mdc D17390_1 D17390 4185 ADAM11 ADAM11 ADAM metallopeptidase domain 11 IPI00299652.2, IPI00299653.2 integrin binding, metalloendopeptidase activity integrin-mediated signaling pathway, proteolysis integral to membrane, plasma membrane 4185
AGhsB010111 ensembl prediction ENSG00000111731 9847 KIAA0528 KIAA0528 KIAA0528 IPI00465142.2, IPI00783895.2, IPI00797751.1 protein binding, transporter activity transport synaptic vesicle, membrane 9847
AGhsB010112 ensembl genscan prediction AC005793.1.1.38968.1 23031 MAST3 MAST3 microtubule associated serine/threonine kinase 3 IPI00028932.7, IPI00741390.1 magnesium ion binding, nucleotide binding, ATP binding, protein binding, transferase activity, protein serine/threonine kinase activity protein amino acid phosphorylation 23031
AGhsB010113 ensembl prediction ENSG00000108239 23232 TBC1D12 TBC1D12 TBC1 domain family, member 12 IPI00479688.4 Rab GTPase activator activity, GTPase activator activity regulation of Rab GTPase activity intracellular 23232
AGhsB010114 core-binding factor, runt domain, alpha subunit 2; translocated to, 3; cbfa2t3 XM_028367_1 XM_028367 863 CBFA2T3 CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 IPI00021473.1, IPI00218436.4, IPI00306845.4, IPI00478335.1, IPI00640461.1, IPI00640985.1, IPI00643562.1 zinc ion binding, transcription factor activity, protein binding regulation of transcription, DNA-dependent, cell proliferation nucleus 863
AGhsB010115 kiaa0638 protein; kiaa0638 AB014538_1 AB014538 23187 PHLDB1 PHLDB1 pleckstrin homology-like domain, family B, member 1 IPI00165619.2, IPI00171456.2, IPI00413100.1, IPI00478789.3, IPI00657870.1 23187
AGhsB010116 kiaa0666 protein; kiaa0666 AB014566_1 AB014566 23002 DAAM1 DAAM1 dishevelled associated activator of morphogenesis 1 IPI00337800.3, IPI00337801.1, IPI00337802.3, IPI00795593.1 actin binding, Rho GTPase binding cellular component organization and biogenesis, actin cytoskeleton organization and biogenesis 23002
AGhsB010117 glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNA, complete cds; glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) NM_002046 NM_002046 2597 GAPDH GAPDH glyceraldehyde-3-phosphate dehydrogenase IPI00219018.7, IPI00788737.1, IPI00789134.1, IPI00793922.1, IPI00794508.1, IPI00794605.1, IPI00794991.1, IPI00795257.1, IPI00795622.1, IPI00796111.1, IPI00796735.1, IPI00797221.1 NAD binding, protein binding, oxidoreductase activity, glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity glycolysis, glucose metabolic process cytoplasm 2597
AGhsB010118 hrihfb2063 AB015349_1 AB015349 150946 FAM59B FAM59B family with sequence similarity 59, member B IPI00302557.5, IPI00742896.1 150946
AGhsB010119 similar to bai1-associated protein 2 BC002495_1 BC002495 10458 BAIAP2 BAIAP2 BAI1-associated protein 2 IPI00180292.5, IPI00185159.7, IPI00299088.3, IPI00642333.1, IPI00644120.1, IPI00647603.1, IPI00790181.1, IPI00791585.1, IPI00792063.1, IPI00794800.1, IPI00796065.1, IPI00796561.1 cytoskeletal adaptor activity, protein C-terminus binding insulin receptor signaling pathway, axonogenesis cytoplasm, plasma membrane 10458
AGhsB010120 kiaa0715 protein; kiaa0715 AB018258_1 AB018258 23120 ATP10B ATP10B ATPase, Class V, type 10B IPI00186385.1, IPI00240432.3, IPI00293928.3 magnesium ion binding, nucleotide binding, ATP binding, hydrolase activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, phospholipid-translocating ATPase activity phospholipid transport, transport integral to membrane, membrane 23120

Total number of rows: 10368

Table truncated, full table size 2845 Kbytes.






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