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Platform GPL13259 Query DataSets for GPL13259
Status Public on Mar 31, 2014
Title CRIBI pig mRNA expression array [Ensembl (Ver. 56) and UniGene (Ver. 38)] (averaged probe version)
Technology type in situ oligonucleotide
Distribution non-commercial
Organism Sus scrofa
Manufacturer CRIBI biotechnology centre http://microcribi.cribi.unipd.it
Manufacture protocol 90K Combimatrix microarray were synthesized using the Combimatrix synthesizer (Combimatrix) that allows in-situ synthesis of oligonucleotide probes through the phosphoramidites chemistry.
 
 
Submission date Mar 09, 2011
Last update date Mar 31, 2014
Contact name Gerolamo Lanfranchi
E-mail(s) stefano.cagnin@unipd.it
Phone +39-0498276219
Organization name University of Padova
Department CRIBI - Biotechnology Center and Biology Department
Lab Functional Genomics Lab
Street address Via U. Bassi, 58/B
City Padova
ZIP/Postal code 35131
Country Italy
 
Samples (28) GSM687439, GSM687440, GSM687441, GSM687442, GSM687443, GSM687444 
Series (2)
GSE27853 Messenger RNA transcript expression in the pig (S. scrofa)
GSE28637 Discovering, evolution, biogenesis, expression and target prediction of porcine micro-RNAs: new regulatory gene expression network in different tissues.

Data table header descriptions
ID
Name Probe name
Array # Number of the array
Feature # Number of the spot. Averaged spot numbers were separated by |
Column Number of the array column. Averaged spot columns were separated by |
Row Number of the array row. Averaged spot rows were separated by |
Probe # Number of the probe. Averaged spot showed probe numbers separated by |
sequence id Ensembl transcript ID or ID of the used sequence to identify the probe and representing the corresponding UniGene cluster. If the probe identify two Ids these are separated by |
Ensembl id Ensembl transcript ID
UniGene id UniGene ID
Ensembl Gene Ensembl gene ID
entrez Entrez gene ID
symbol Gene symbols
Alias Gene aliases according to description
GB_LIST mRNA RefSeq ID
refSeq peptide RefSeq peptide ID
Description Gene description
Alternative descriptions Gene description derived from aliases or UniGene database
Alternative Entrez gene Entrez gene ID from alternative descriptions
Alternative symbol Gene symbol from alternative description
Similar protein ID describing similar proteins
Alternative UniGene UniGene ID from alternative description
Uniprot Id ID Uniprot
SEQUENCE Probe sequence
Length Probe length
Probe Comment Comment
SPOT_ID

Data table
ID Name Array # Feature # Column Row Probe # sequence id Ensembl id UniGene id Ensembl Gene entrez symbol Alias GB_LIST refSeq peptide Description Alternative descriptions Alternative Entrez gene Alternative symbol Similar protein Alternative UniGene Uniprot Id SEQUENCE Length Probe Comment SPOT_ID
1 <no oligo> 1 35542|94747|65099|22667|538|3990|94203|23846|31915|56123|63739|16494|25282|25283|16493|25281|270|271|272|273|274|275|276|277|278|279|25115|56835|56834|51114|15950|2267|39926|39924|39922|94022|21927|26022|69179|85574|63110|63111|63112|63113|63114|63115|63116|63117|63118|63119|8098|63448|63449|36539|2630|91|39744|1627|1626|39740|63204|63205|1629|1628|63200|63201|63202|63203|71627|18927|31644|71750|551|550|28002|28001|59102|59100|59101|37174|94838|67366|1179|39350|5531|90742|66187|91469|91468|91467|88568|88566|30011|8011|5622|89851|28742|26566|88491|91846|7526|32822|93206|22018|22017|71927|88386|88387|88385|59736|27382|65643|60838|65462|32006|88038|27275|93025|61835|54582|4534|24299|62470|48225|58662|48226|58843|63473|63472|63471|63470|63477|63476|63475|63474|63479|63478|18843|48317|48316|48318|62651|71296|71292|56833|48135|48137|18934|63278|63271|63270|63273|63272|63275|63274|63277|63276|59825|59827|59826|59828|71748|71746|68907|27547|48044|48046|27819|27549|27548|63305|63304|63306|63301|63300|63303|63302|59555|59554|59556|24555|59553|24556|59009|34091|47683|47681|1542|24390|542|543|540|541|546|547|544|545|31754|548|549|31751|31750|31753|31752|31571|31570|31572|91211|34635|89398|50660|50667|31377|31376|31375|31374|31373|31372|31371|31370|55035|363|31379|31378|16129|88854|16123|56214|61654|35451|64102|38987|31805|31807|31806|31809|31808|69995|94383|94381|94380|907|90486|94389|57302|58830|63468|63469|63464|63465|63466|63467|63460|63461|63462|63463|1814|21926|53751|53750|90667|40166|70358|48129|48122|53570|63268|63269|63266|63267|93566|71355|71174|89942|27550|71990|94566|59010|59011|59012|31662|37990|39379|39378|63447|91198|31748|31749|31746|31747|31744|31745|31742|31743|539|71778|31566|31567|31564|31565|31562|31563|31560|31561|8039|31568|31569|63561|40438|63292|8523|63563|63562|63565|32731|63564|63567|38171|63566|27019|91195|93750|89126|31360|31361|31362|31363|31364|31740|31366|28651|31368|31369|31741|88838|88839|16131|65190|6166|19290|19297|64827|93115|56667|82945|25387|16222|16220|31816|31817|31814|31815|31812|31813|31810|31811|31818|31819|93575|93574|93571|93570|93573|93572|51121|64555|7830|6347|25099|58828|58829|85666|58827|85665|7948|39803|94109|94108|60475|94107|94106|36811|90123|53569|818|819|810|811|812|813|814|815|816|817|26838|87131|27835|39742|86406|63209|68635|39622|15857|15858|63206|63207|6982|24571|30283|39563|31553|31552|31551|31550|31557|31556|31555|31554|79505|31559|31558|72262|8283|31481|31480|31482|59371|59373|59372|59374|55126|90923|34182|66550|35270|23483|94294|8462|8463|8460|8461|8464|8192|51023|59206|19115|27006|27004|27005|27003|6438|88840|7558|39382|39380|39381|31391|7556|7555|7554|4171|16039|32278|19025|56472|56471|56470|56653|56652|56651|16214|94378|94379|22758|16585|16584|16583|85483|31823|31822|31821|31820|31824|1|93567|93564|93565|93562|93563|93568|31365|64011|21655|21654|31367|7826|47864|47865|2086|2539|79764|5078|94118|94119|94112|94113|94110|94111|94116|94117|94114|94115|4987|33094|63538|63539|24118|37355|821|820|823|822|56925|67547|33547|27820|27821|27822|71083|5259|30646|57030|1995|39559|34998|31548|31549|31544|31545|31546|31547|31540|31541|31542|31543|27729|89035|86678|8614|2|61019|88294|88295|88296|51030|8188|19108|91559|91558|31388|31389|31386|31387|31384|31385|31382|31383|31380|31381|26294|5803|16207|63208|16116|85393|39954|85394|93027|80140|80141|80142|31464|90926|90925|90924|85484|58027|27926|62923|38806|64374|88567|3|36902|62742|29739|1723|36630|71566|71564|71568|15948|15949|58571|27457|71899|31715|31714|31717|31716|31719|31718|62107|27459|27458|30374|31539|31538|635|72202|72203|72200|72201|31535|31534|40469|40468|72199|27730|27731|27732|59191|59190|59193|59192|31629|31628|31625|31624|31627|31626|31623|1899|31445|31444|32459|31446|31443|31442|31449|31448|50842|50849|35814|91030|27110|24648|55670|24647|24646|55851|60203|85575|93387|4|63644|56744|63646|63647|24829|63641|56743|63643|24827|63648|36358|16305|90939|7798|24919|24918|39835|39831|39833|25206|7979|93839|93834|93835|93836|93837|25192|25190|25191|80049|7373|7372|7376|7375|7374|53841|53842|33366|38715|63358|63359|63357|37718|37083|67638|39531|28470|79779|94928|79777|7163|94925|94924|94923|94922|79771|40470|40467|40466|8070|92571|8279|39288|39287|5|31638|31639|31636|31637|31634|31635|31632|31533|31630|31631|31456|31457|31454|31455|31452|31453|31450|31451|31458|31459|31537|87403|31536|39199|39198|39197|39196|91377|66459|91379|91378|92390|88657|88658|88659|26475|91574|82763|19018|69814|28107|92118|65371|89307|82582|27278|93029|93028|39654|61291|93026|27277|27276|63631|63630|63633|63632|63635|63634|63637|63636|63639|63638|56758|16313|16311|57755|34454|57574|63189|63188|63187|63186|63185|63184|63183|63182|63181|63180|16402|16403|16401|93841|93840|93843|93842|93845|93844|93847|93846|79953|94382|80050|80051|94387|61926|94385|94384|79959|94388|6075|58918|58919|54491|31447|63569|63568|63299|63298|63293|63560|1904|63290|1902|1903|1900|63294|94659|94658|94651|94650|94653|94652|94655|94654|94657|94656|6|63367|63366|63365|63364|63363|63362|63361|63360|59750|63369|63368|30555|6891|91380|33910|47863|31739|31738|31737|31736|31735|31734|31733|31732|31731|31730|37899|31287|31286|31285|31284|31283|31282|31281|1270|31289|31288|39290|39291|8646|8644|8645|8642|8643|31463|31462|31461|31460|31467|31466|31465|23755|31469|31468|66006|31190|91560|91561|63190|63191|63192|63193|63194|61110|34726|88310|6710|24662|39078|82756|19206|93030|93031|7|25750|63629|21835|21836|29286|15859|57211|24934|82938|63198|63199|27910|27911|27912|27913|70086|63195|63196|63197|7918|7916|79946|94390|90395|182|57105|57106|57107|63284|63285|63286|63287|63280|63281|62379|63283|63288|63289|63578|63572|63573|63570|63571|63576|63577|63574|63575|3446|71687|48031|48038|63370|63371|63372|63373|63374|53660|63376|63377|63378|63379|63176|63177|63175|63282|63178|63179|58921|58920|71203|71202|40103|48227|71205|40107|16492|71596|71840|31728|31729|79689|31720|31721|31722|31723|27460|31725|31726|31727|40075|71115|71114|71113|71112|71111|71446|67275|31291|31292|31293|8251|31295|31296|31297|31298|31299|91287|91286|91289|91288|89670|39468|66278|31478|31479|31474|31475|31476|31477|31470|31471|31472|31473|32550|23302|7435|93293|79506|79507|92934|94391|69270|27095|27094|27097|27096|92027|65915|71931|59387|24920|7920|39863|4443|71836|57483|69723|63375|63547|63546|63545|63544|63543|63542|63541|63540|58118|70630|63549|63548|63640|24828|90745|90744|90743|38443|56742|63279|59735|59734|59737|39772|53478|53479|63389|63388|63385|63384|63387|63386|63381|63380|63383|63382|68454|58934|68182|29195|59645|59644|59646|59643|29467|92299|1094|1095|30827|1090|1091|1092|1093|58299|39472|59463|59462|59465|59464|31661|31660|31663|18836|71206|72022|71204|28003|88931|88930|90833|30918|23574|8130|7739|24557|7735|19199|66731|3355|70902|39259|35723|88205|88204|88203|56561|56563|56562|5350|93290|93291|93292|82484|93294|93295|93296|93297|93298|93299|32187|55942|63455|26203|7557|85212|85211|31390|2358|93478|68998|93838|57016|31724|57014|57015|86587|56381|56380|36086|63550|63551|63552|63553|63554|63555|63556|63557|63558|63559|94660|94661|94662|94663|37446|79855|90758|79961|70539|31290|39650|21564|21563|63396|31294|63394|63395|63392|63393|63390|63391|39894|59099|94475|59659|37627|40012|40016|33638|30102|1087|1086|1085|1084|1083|1082|71718|1089|1088|59478|33819|35995|47940|47947|79688|79687|91755|94927|72018|47682|88929|55307|94386|94926|67819|1631|7707|63454|63105|27654|79598|38262|79597|79596|61382|31300|63645|8342|31099|55398|1901|3899|28923|61563|25659|88747|88219|6619|88748|88749|86315|82491|91470|69451|64646|1637|25011|25010|65734|86950|63642|56379|55579|82575|56395|63297|25478|63296|63830|63295|22939|63014|79862|1451|79868|90214|53659|7254|63121|63120|63123|63122|63124|33003|93569|2902|91106|91107|91105|91108|34907|57846|71478|58390|68726|71474|68091|1630|63212|63211|1633|47953|1636|31649|47955|31647|31646|31645|28004|31643|31642|31641|31640|40288|40287|40286|40285|40284|4262|47772|47773|454|66822|47774|27640|27641|59284|59281|59283|59282|26747|50751|50758|72171|3083|8374|8370|5894|2811|86859|82666|24737|87494|23211|87947|24739|24738|25009|3627|4715|87675|16298|3718|36267|85303|85302|82847|93302|93303|93300|93301|24843|998|60022|56923|79870|56924|63482|63483|63480|63481|63486|63487|63484|63485|29558|70267|21746|21745|33275|62198|91197|40347|54854|1898|91196|31658|31659|29014|31650|31651|31652|31653|31654|31655|31656|31657|29830|71024|71023|71022|71021|71020|1359|1358|35179|8100|8102|1357|1356|1355|1354|27639|27638|72291|72290|72293|72292|72294|91649|91483|72109|72108|39289|88582|27188|27187|27186|27185|39200|56486|91650|16040|16041|88763|27291|82673|92843|92662|60566|27367|27366|27369|27368|69542|267|266|269|268|25101|25100|80232|80233|80231|90835|90834|90836|60294|31633|82854|23030|88475|87222|88476|64283|88477|93931|60747|56939|53387|4806|53388|64918|71383|71387|31354|63107|63106|63457|63456|63451|63450|63453|63452|63459|63458|63109|63108|38534|93659|31648|90654|89579|90651|90653|90652|40194|54763|40198|48409|48408|70811|48407|63213|67003|1632|63210|1634|1635|63215|63214|1638|1639|71655|71657|71659|59931|40377|40376|40375|34363|40379|40378|67094|91014|91015|91016|91017|7644|59115|7648|3174|27563|726|68363|91652|91302|91651|1367|28379|72112|72110|72111|31359|31358|63291|31351|31353|31352|31355|24027|31357|31356|8552|8553|8551|8009|8554|8555|8007|67910|28198|87766|25931|1366|50939|1364|1365|1362|1363|1360|1361|7463|50932|7467|7466|7465|7464 214|212|213|210|211|164|165|166|167|20|28|29|4|8|163|263|262|261|260|267|266|265|264|269|268|199|198|195|194|197|196|191|190|193|192|270|271|272|89|111|110|253|82|83|80|81|86|87|84|85|256|257|3|254|7|255|108|109|242|102|103|100|101|106|107|104|105|32|31|30|177|60|258|259|179|178|68|176|250|174|173|172|171|170|181|175|182|183|180|2|162|187|184|6|186|188|189|185|99|98|168|169|91|90|93|92|95|94|97|96|11|10|13|12|15|14|17|16|19|18|88|151|159|119|1|5|9|201|200|202|77|76|75|74|73|72|71|79|78|120|121|122|123 216|217|214|215|212|213|210|211|264|265|218|219|133|132|131|130|137|136|135|134|139|138|225|24|25|26|224|20|21|22|23|223|28|29|222|344|345|346|347|340|4|342|343|8|220|348|349|227|120|121|122|123|124|125|126|127|128|129|59|294|295|293|201|319|318|198|197|203|315|314|115|114|88|89|111|110|113|112|205|80|81|86|87|84|85|207|256|206|226|27|3|7|304|305|245|244|108|109|241|240|243|242|102|103|100|101|106|107|104|105|32|31|30|247|246|252|339|338|335|334|337|336|331|330|333|332|60|61|258|259|178|177|176|250|251|253|257|254|255|249|248|2|187|6|188|202|341|221|99|98|229|228|91|90|93|92|95|94|97|96|11|10|13|12|15|14|17|16|19|18|117|116|204|322|238|239|234|235|236|237|230|231|232|233|119|118|1|323|320|321|5|327|324|325|9|328|329|146|147|144|145|142|143|140|141|209|208|148|149|71|70|263|262|261|260|326|266 empty
2 pig00123;pig00124 1 252|251 252|251 1 177|178 ENSSSCT00000017907|Ssc#S35165795 ENSSSCT00000017907 Ssc.28080 ENSSSCG00000016445 GIMAP7 Transcribed locus, moderately similar to NP_694968.1 GTPase, IMAP family member 7 [Homo sapiens] Transcribed locus, moderately similar to NP_694968.1 GTPase, IMAP family member 7 [Homo sapiens] 168537 GIMAP7 NP_694968.1 Hs.647074 Q8NHV1 TGGTGCGGAGGAGGCACAGTGAAAACGTAAGAACTCTAAC 40 imported via Layout Designer
3 pig00236 1 392 120 2 290 Ssc#S35168157|ENSSSCT00000017963 ENSSSCT00000017963 Ssc.50203 ENSSSCG00000016499 RAB19 Transcribed locus, strongly similar to NP_001019497.1 RAB19, member RAS oncogene family [Rattus norvegicus] 500088 Rab19 NP_001019497.1 Rn.53184 Q5M7U5 GAAATACGGAGCGGCCAACTTGGTCATTATGCTGATCGGT 40 imported via Layout Designer
4 pig00288;pig00289 1 445|444 173|172 2 342|343 ENSSSCT00000017987|Ssc#S35166385 ENSSSCT00000017987 Ssc.37344 ENSSSCG00000016519 AKR1D1 Transcribed locus, strongly similar to NP_005980.1 aldo-keto reductase family 1, member D1 [Homo sapiens] Transcribed locus, strongly similar to NP_005980.1 aldo-keto reductase family 1, member D1 [Homo sapiens] 6718 AKR1D1 NP_005980.1 Hs.201667 P51857|B4DPN3 TCCTGAACAAACCAGGACTCAAGTATAAGCCAGTCAGCAA 40 imported via Layout Designer
5 pig00546;pig00547 1 720|721 177|176 3 601|600 Ssc#S18557169|ENSSSCT00000018119 ENSSSCT00000018119 Ssc.19303 ENSSSCG00000016641 Transcribed locus, moderately similar to XP_001100852.1 PREDICTED: hypothetical protein [Macaca mulatta] Transcribed locus, moderately similar to XP_001100852.1 PREDICTED: hypothetical protein [Macaca mulatta] XP_001100852.1 GCATTTGTGCTTGTTTGGGGGTATATGCACGAAAGAGAAA 40 imported via Layout Designer
6 pig00811 1 1002 186 4 865 Ssc#S20116685|ENSSSCT00000018249 ENSSSCT00000018249 Ssc.52080 ENSSSCG00000016764 397093 INHBA NM_214028.1 NP_999193.1 Inhibin, beta A activin beta-A chain|inhibin beta A chain|inhibin beta-subunit|inhibin, beta A (activin A, activin AB alpha polypeptide);inhibin, beta A|Inhibin, beta A 397093 INHBA NP_999193.1 Ssc.52080 P03970 GTCAACATCTGCTGTAAGAAGCAGTTCTTTGTCAGTTTCA 40 imported via Layout Designer
7 pig01345;pig01346 1 1568|1569 209|208 6 1400|1399 Ssc#S34518103|ENSSSCT00000018900 ENSSSCT00000018900 Ssc.21231 ENSSSCG00000017361 TMUB2 Transcribed locus, strongly similar to NP_803190.2 transmembrane and ubiquitin-like domain containing 2 isoform a [Homo sapiens] Transcribed locus, strongly similar to NP_803190.2 transmembrane and ubiquitin-like domain containing 2 isoform a [Homo sapiens] 79089 TMUB2 NP_803190.2 Hs.181391 Q71RG4 GGTCCTAGCTTGGCTTTCTACCTATGTAGCAGACAGCGGT 40 imported via Layout Designer
8 pig01549;pig01550 1 1788|1787 155|156 7 1603|1604 Ssc#S34531295|ENSSSCT00000019002 ENSSSCT00000019002 Ssc.42057|Ssc.58857|Ssc.71072 ENSSSCG00000017454 Transcribed locus, moderately similar to NP_001078995.1 keratin associated protein 1-3 [Mus musculus] Transcribed locus, moderately similar to NP_001034591.1 keratin associated protein 1-4 [Mus musculus]|Transcribed locus, moderately similar to NP_112229.1 keratin associated protein 1-1 [Homo sapiens]|Transcribed locus, moderately similar to NP_001078995.1 keratin associated protein 1-3 [Mus musculus] 81851|435273|629873 KRTAP1-1|Krtap1-3|Krtap1-4 NP_001034591.1|NP_112229.1|NP_001078995.1 Hs.247934|Mm.423246|Mm.359576 Q07627|Q3V2D6|A2A588 TGGTGGTGGCATTGGCGGTGGCATTGGCGGTGGCCAGGAGGGTAG 45 imported via Layout Designer
9 pig01634 1 1873 241 7 1688 ENSSSCT00000019045|Ssc#S35165200 ENSSSCT00000019045 Ssc.55121 ENSSSCG00000017492 Transcribed locus, strongly similar to NP_644809.1 ORM1-like 3 [Homo sapiens] Transcribed locus, strongly similar to NP_644809.1 ORM1-like 3 [Homo sapiens] 94103 ORMDL3 NP_644809.1 Hs.514151 Q8N138 GAAGAGCAGCAGGAGAGGGGCGGCAGGATGAATGTGGGAACG 42 imported via Layout Designer
10 pig01913 1 2161 257 8 1967 ENSSSCT00000019188|Ssc#S26653059 ENSSSCT00000019188 Ssc.7576 ENSSSCG00000017626 654327 SFRS1 NM_001038007.1 NP_001033096.1 Splicing factor, arginine/serine-rich 1 Splicing factor, arginine/serine-rich 1|splicing factor arginine/serine-rich 1|splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor);splicing factor, arginine/serine-rich 1 654327 SFRS1 NP_001033096.1 Ssc.7576 Q3YLA6 TCTCGCTCTCGTACATAAGATGATTGGTGACACTTTTTTG 40 imported via Layout Designer
11 pig02011 1 2259 83 9 2065 Ssc#S35166302|ENSSSCT00000019240 ENSSSCT00000019240 Ssc.22801 ENSSSCG00000017676 BCAS3 Transcribed locus, strongly similar to NP_619622.2 breast carcinoma amplified sequence 3 [Mus musculus] NP_619622.2 CACAAATCAAGCAGCCGATGACATTGGGGACCATCACCAA 40 imported via Layout Designer
12 pig02066 1 2315 139 9 2120 Ssc#S23764605|ENSSSCT00000019269 ENSSSCT00000019269 Ssc.9803 ENSSSCG00000017703 CCL14 Transcribed locus, weakly similar to NP_001040050.1 chemokine (C-C motif) ligand 14 [Bos taurus] Transcribed locus, weakly similar to NP_001040050.1 chemokine (C-C motif) ligand 14 [Bos taurus] 616723 CCL14 NP_001040050.1 Bt.6936 Q29RR9 TCATCACCATAATAGGCCGTTTCGTTTGTGCCAACCCCAG 40 imported via Layout Designer
13 pig02298 1 2549 101 10 2352 ENSSSCT00000019381|Ssc#S19539423 ENSSSCT00000019381 Ssc.26620 ENSSSCG00000017808 Transcribed locus, moderately similar to NP_067607.1 diazepam binding inhibitor-like 5 [Rattus norvegicus] Transcribed locus, moderately similar to NP_067607.1 diazepam binding inhibitor-like 5 [Rattus norvegicus] 59116 Dbil5 NP_067607.1 Rn.35510 P56702 ACAAAGGGATGTCCAAGATGGACGCCATGAGGCTCTATGT 40 imported via Layout Designer
14 pig02420;pig02421 1 2673|2672 225|224 10 2475|2474 Ssc#S18550902|ENSSSCT00000019443 ENSSSCT00000019443 Ssc.1559 ENSSSCG00000017867 TMEM93 Transcribed locus, strongly similar to NP_001099276.1 transmembrane protein 93 [Rattus norvegicus] Transcribed locus, strongly similar to NP_001099276.1 transmembrane protein 93 [Rattus norvegicus] 287477 Tmem93 NP_001099276.1 Rn.258 D4ABX9 CCATCCTGCTCTCTTTGCTCTTAATTCTCAAGGCGGGA 38 imported via Layout Designer
15 pig02935;pig02936 1 3192|3191 200|199 12 2990|2989 Ssc#S23213515|ENSSSCT00000007684 ENSSSCT00000007684 Ssc.26541 ENSSSCG00000007015 100156903 LOC100156903|GOLGA7 LOC100156903 XM_001928790.1 XP_001928825.1 Golgi autoantigen, golgin subfamily a, 7|Similar to Golgi autoantigen, golgin subfamily a, 7 Golgi autoantigen, golgin subfamily a, 7|Similar to Golgi autoantigen, golgin subfamily a, 7 XP_001928825.1 ACCATCTTCTTGTGCATGGAGACTCATTATGAGAAGGT 38 imported via Layout Designer
16 pig03202 1 3460 196 13 3256 ENSSSCT00000007823|Ssc#S35164691 ENSSSCT00000007823 Ssc.23535 ENSSSCG00000007150 CENPB Transcribed locus, strongly similar to NP_031708.2 centromere protein B [Mus musculus] 12616 Cenpb NP_031708.2 Mm.440169 Q7TSG8 ACTTGGAACACGACCTGGTCCATGTAACCAGGAAGAACCA 40 imported via Layout Designer
17 pig03253 1 3511 247 13 3307 ENSSSCT00000007849|Ssc#S26392224 ENSSSCT00000007849 Ssc.70657 ENSSSCG00000007175 Transcribed locus, strongly similar to NP_991230.1 small nuclear ribonucleoprotein polypeptides B and B1 [Danio rerio] Transcribed locus, strongly similar to NP_991230.1 small nuclear ribonucleoprotein polypeptides B and B1 [Danio rerio] 402966 snrpb NP_991230.1 Dr.30320 Q9I9E5 CAGAAAGATCAAACCAAAGAACTCAAAACAAGCGGAGAGAGA 42 imported via Layout Designer
18 pig03429;pig03430 1 3689|3688 153|152 14 3483|3484 Ssc#S29983650|ENSSSCT00000007939 ENSSSCT00000007939 Ssc.47021 ENSSSCG00000007256 100156284 SPAG4L LOC100156284;SUN5 XP_001926618.1 Transcribed locus, moderately similar to XP_001926618.1 PREDICTED: similar to Sperm associated antigen 4-like [Sus scrofa]|Sad1 and UNC84 domain containing 5 XP_001926618.1 GAGATGGAAGCCATGTCTGATGAGCAAAAGATGGCCCA 38 imported via Layout Designer
19 pig03466;pig03467 1 3726|3727 191|190 14 3520|3521 ENSSSCT00000007956|Ssc#S35171649 ENSSSCT00000007956 Ssc.50148 ENSSSCG00000007271 100156678 LOC100156678 XM_001926937.1 XP_001926972.1 similar to zinc finger protein 341|Similar to zinc finger protein 341 Similar to zinc finger protein 341|similar to zinc finger protein 341 XP_001926972.1 AGTTCAACCGGCCAGACAAGCTGAAGGCTCATATCCTCTC 40 imported via Layout Designer
20 pig03619;pig03620 1 3879|3880 72|71 15 3673|3674 ENSSSCT00000008045|Ssc#S46875914 ENSSSCT00000008045 Ssc.10965 ENSSSCG00000007353 100157756 LOC100157756 XM_001929063.1 XP_001929098.1 Similar to Transcription factor MafB (V-maf musculoaponeurotic fibrosarcoma oncogene homolog B)|similar to Transcription factor MafB (V-maf musculoaponeurotic fibrosarcoma oncogene homolog B) similar to Transcription factor MafB (V-maf musculoaponeurotic fibrosarcoma oncogene homolog B)|Similar to Transcription factor MafB (V-maf musculoaponeurotic fibrosarcoma oncogene homolog B) XP_001929098.1 AAGGTCAAGTGTGAGAAACTCGCCAACTCCGGCTTCAGGG 40 imported via Layout Designer

Total number of rows: 60933

Table truncated, full table size 13850 Kbytes.




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Supplementary file Size Download File type/resource
GPL13259_platform_physic.txt.gz 3.6 Mb (ftp)(http) TXT

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