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Status
Public on Mar 10, 2011
Title
Arizona Arabidopsis Oligonucleotide Microarrays Version 3.0
Technology type
spotted oligonucleotide
Distribution
custom-commercial
Organism
Arabidopsis thaliana Manufacturer
Arizona Arabidopsis Oligonucleotide Microarray
Manufacture protocol
The arrays were printed using the Qiagen-Operon Arabidopsis Genome Array Ready Oligo Set (AROS) Version 3.0. This set comprised 29,000 oligonucleotides. The print format comprises a single array printed using 48 pins. The array contains 12 metarows and 4 metacolumns, with the subarrays containing 25 columns and 26 rows with a spacing of 170 x 165 microns.
Web link
http://www.ag.arizona.edu/microarray/ Submission date
Mar 09, 2011
Last update date
Mar 10, 2011
Contact name
Raju Datla
E-mail(s)
Raju.Datla@nrc-cnrc.gc.ca Organization name
NRC-PBI
Street address
110 Gymnasium Place
City
Saskatoon
State/province
SK
ZIP/Postal code
S7N 0W9
Country
Canada
Samples (74)
GSM687608 , GSM687609 , GSM687610 , GSM687611 , GSM687612 , GSM687613
GSM687614 ,
GSM687615 ,
GSM687616 ,
GSM687617 ,
GSM687618 ,
GSM687619 ,
GSM687620 ,
GSM687621 ,
GSM687622 ,
GSM687623 ,
GSM687624 ,
GSM687625 ,
GSM687626 ,
GSM687627 ,
GSM687628 ,
GSM687629 ,
GSM687630 ,
GSM687631 ,
GSM687632 ,
GSM687633 ,
GSM687634 ,
GSM687635 ,
GSM687636 ,
GSM687637 ,
GSM687638 ,
GSM687639 ,
GSM687640 ,
GSM687641 ,
GSM687642 ,
GSM687643 ,
GSM687645 ,
GSM687647 ,
GSM687650 ,
GSM687652 ,
GSM687655 ,
GSM687657 ,
GSM687659 ,
GSM687662 ,
GSM687664 ,
GSM687666 ,
GSM687669 ,
GSM687672 ,
GSM687674 ,
GSM687676 ,
GSM687679 ,
GSM687681 ,
GSM687684 ,
GSM687686 ,
GSM687689 ,
GSM687691 ,
GSM687693 ,
GSM687696 ,
GSM687698 ,
GSM687701 ,
GSM687703 ,
GSM687706 ,
GSM687708 ,
GSM687711 ,
GSM687713 ,
GSM687715 ,
GSM687717 ,
GSM687720 ,
GSM4227752 ,
GSM4227753 ,
GSM4227754 ,
GSM4227755 ,
GSM4227756 ,
GSM4227757 Series (2)
GSE27857 Gene expression during seed coat development in Arabidopsis
GSE142459 Overexpression of subtilate4.13
Data table header descriptions ID Oligo_ID ORF AGI gene number in TAIR
SEQUENCE Oligonucleotide sequence
Data table ID Oligo_ID ORF SEQUENCE 1
A005203_01
At5g49910 ATCATCCTCAGCCAAAGGTGGAGACAACGGCGGTGATGTGATTGACGCTGACTTCACAGACAGCAATTAA
2
A021047_01
At3g18780 AGGCAGGTCCAGGAATCGTTCACAGAAAATGTTTCTAAGCTCTCAAGATCAAAGGCTTAAAAAGCTGGGG
3
A001043_01
At1g64740 TGTTGGGGGTGGAACAGGTTCTGGTTTGGGTTCTTTACTGTTGGAGCGCTTGTCCGTAGATTTTGGAAAA
4
A021047_01
At3g18780 AGGCAGGTCCAGGAATCGTTCACAGAAAATGTTTCTAAGCTCTCAAGATCAAAGGCTTAAAAAGCTGGGG
5
A001280_01
At1g01950 AATGAACGAAGTGAGTCAACAACTGATAGTGGACCAAGGTGGAATCAGCTTGCTATCTCTAACAGCTGCA
6
At30000106
At1g02010 GCTGAAATTGCTGTCGGAAAAAGACATACAAGGGGCTCCTGCTCAGCCCTTCAAACCACAATACTGGTGA
7
A200207_01
At1g02100 GAATGATGATTGATTGCACAAAGTTAGAAAGGCCTTTCTCTGGGTGCTGAGCAGAAAACGAAGGAAACAC
8
A005521_01
At1g02150 AAATCTTCTGATGAATGCGTATGTCAAAAACGACCAACTAGAGACAGCTGAGGGGTTGTTCGACCACATG
9
A025916_01
At1g02305 TTCACTCAGCCTCTGTTTTCTTCTGTTTAGGGCTTCTAATTTCATCCTTCAACTTGTTGCAGGGTATTGC
10
A001000_01
At1g02360 CCTCTCAATCTCTTATTTACTATCTTCCGCCCAAACCGAAGCCACCTCAATCGAGAGATTAGTGCCAAGA
11
At30000172
At1g02530 CGAGTGCTCTTGATGCAGAATCAGAGCGACTGGTTCAGGATGCGCTTGACCGAGTGATTGTAAACCGAAC
12
A200222_01
At1g02590 AAACCCTTGTATGAAGGAAATGATGAAAAAAACTTAAAGTGTGTGGCTGCTGGGATTCGAGCCCAGCCAG
13
A200249_01
At1g05200 TACCAGAGGTTGCTACCAGAAAGTGCGGACGAGGAAAGGGCAGGCGAAGTGTCTGAGCCATCTCGATCAG
14
At30000486
At1g05250 CCGGCAAAAATGGTGAGATCAGGAAGAGATGCGCCTTCCCTAACTAATTTGGATCGATCAGACCGGGTTT
15
A004552_01
At1g05420 GGATAATTACGATACTGCCACTAGGCTTCTTACCGGAGGAACCGCCGTGAAACACTACGTGCAATCTCCT
16
At30000510
At1g05460 GATGAATGGTCTGATGGGTGGGACAACAATGGCGGCACAAACGGGATCAATCAAGAAGGAAGCAGCAACG
17
A200255_01
At1g05615 AGTATGAGCATCTTCTTCTGGGACGAGAGAGCCAACACCGGAGTGGCTGGTGCGGTTGATGAGGGTAAAA
18
A004453_01
At1g05670 TGATGGGCTTTGTAAGGAAGGGGACTTAGATTCAGCGAATGAACTTCTCCATGAAATGTGGAAAATAGGT
19
A001040_01
At1g05800 GTGTCCATGACCTCGAGACTTACATCACTCTAGTAAACCGTCCGAGATGCTCGAAATTGGCGGTTAATGA
20
A024536_01
At1g05850 TTTGTCGGAAACTGGAAACCTACAAAGAACGACACTTTGTCCAAGCGTGGCCCGACTTTTGGCAGCACCA
29254 2779 Kbytes .Supplementary data files not provided
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