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Platform GPL13792 Query DataSets for GPL13792
Status Public on Jul 01, 2011
Title MRA-1041_miRHumanViruses_13.0_090309
Technology type in situ oligonucleotide
Distribution commercial
Organisms Homo sapiens; Human alphaherpesvirus 1; Human alphaherpesvirus 2; Human betaherpesvirus 5; Murid betaherpesvirus 1; human gammaherpesvirus 4; Gallid alphaherpesvirus 2; JC polyomavirus; Human immunodeficiency virus 1; Murid gammaherpesvirus 4; Gallid alphaherpesvirus 3; Human gammaherpesvirus 8; Macacine gammaherpesvirus 4; Merkel cell polyomavirus; Macaca mulatta rhadinovirus; Betapolyomavirus hominis; Betapolyomavirus macacae
Manufacturer LC Sciences
Manufacture protocol Arrays are made based µParaflo microfluidic technology (Atactic Technologies). On the µParaflo microfluidic chip, each detection probe consists of a chemically modified nucleotide coding segment complementary to target microRNA (from miRBase, http://www.mirbase.org/) or other RNA (control or customer defined sequences) and a spacer segment of polyethylene glycol to extend the coding segment away from the substrate. The detection probes are made by in situ synthesis using PGR (photogenerated reagent) chemistry.
Catalog number MRA-1041
Support silicon
 
Description Human and Virus miRNA microarray with 100% coverage of mature miRNAs listed in miRBase version 13.0
 
Contributor(s) Eicken C
Submission date Jun 30, 2011
Last update date Jul 14, 2011
Contact name Christoph Eicken
E-mail(s) ceicken@lcsciences.com
Phone +1 (713) 664-7087
Organization name LC Sciences, LLC
Street address 2575 W. Bellfort
City Houston
State/province TX
ZIP/Postal code 77054
Country USA
 
Relations
Alternative to GPL13920

Data table header descriptions
ID
MetaRow MetaRow
MetaColumn MetaColumn
Row Row of the probe position on the chip
Column Column of the probe position on the chip
Reporter Name Name of the probe on the chip
Reporter BioSequence Database Entry[mirna] sequence of the targeted miRNA of the probe on the chip
miRNA_ID miRNA ID
Reporter BioSequence Type BioSequence type of the probe on the chip
Reporter BioSequence Polymer Type BioSequence polymer type of the probe on the chip
Reporter Group [role] General function of the particular probe on the chip: experimental / control
Reporter Control Type Specific function of the particular probe on the chip
Reporter Comment Target sequence (5' to 3') of the probe
TARGET_SEQUENCE Target sequence (5' to 3') of the probe
SPOT_ID control ID

Data table
ID MetaRow MetaColumn Row Column Reporter Name Reporter BioSequence Database Entry[mirna] miRNA_ID Reporter BioSequence Type Reporter BioSequence Polymer Type Reporter Group [role] Reporter Control Type Reporter Comment TARGET_SEQUENCE SPOT_ID
435 1 1 15 1 hsa-5S-b1 ss_oligo DNA Control control_biosequences --hsa-5S-b1
445 1 1 15 11 hsa-5S-b1 ss_oligo DNA Control control_biosequences --hsa-5S-b1
455 1 1 15 21 hsa-5S-b1 ss_oligo DNA Control control_biosequences --hsa-5S-b1
465 1 1 15 31 hsa-5S-b1 ss_oligo DNA Control control_biosequences --hsa-5S-b1
466 1 1 16 1 hsa-5S-b2 ss_oligo DNA Control control_biosequences --hsa-5S-b2
476 1 1 16 11 hsa-5S-b2 ss_oligo DNA Control control_biosequences --hsa-5S-b2
486 1 1 16 21 hsa-5S-b2 ss_oligo DNA Control control_biosequences --hsa-5S-b2
496 1 1 16 31 hsa-5S-b2 ss_oligo DNA Control control_biosequences --hsa-5S-b2
497 1 1 17 1 hsa-5S-b3 ss_oligo DNA Control control_biosequences --hsa-5S-b3
507 1 1 17 11 hsa-5S-b3 ss_oligo DNA Control control_biosequences --hsa-5S-b3
517 1 1 17 21 hsa-5S-b3 ss_oligo DNA Control control_biosequences --hsa-5S-b3
527 1 1 17 31 hsa-5S-b3 ss_oligo DNA Control control_biosequences --hsa-5S-b3
528 1 1 18 1 hsa-5S-b4 ss_oligo DNA Control control_biosequences --hsa-5S-b4
538 1 1 18 11 hsa-5S-b4 ss_oligo DNA Control control_biosequences --hsa-5S-b4
548 1 1 18 21 hsa-5S-b4 ss_oligo DNA Control control_biosequences --hsa-5S-b4
558 1 1 18 31 hsa-5S-b4 ss_oligo DNA Control control_biosequences --hsa-5S-b4
559 1 1 19 1 hsa-5S-b5 ss_oligo DNA Control control_biosequences --hsa-5S-b5
569 1 1 19 11 hsa-5S-b5 ss_oligo DNA Control control_biosequences --hsa-5S-b5
579 1 1 19 21 hsa-5S-b5 ss_oligo DNA Control control_biosequences --hsa-5S-b5
589 1 1 19 31 hsa-5S-b5 ss_oligo DNA Control control_biosequences --hsa-5S-b5

Total number of rows: 3968

Table truncated, full table size 532 Kbytes.




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