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Platform GPL1387 Query DataSets for GPL1387
Status Public on Jul 30, 2004
Title GeneMap Human CancerArray
Technology type spotted DNA/cDNA
Distribution custom-commercial
Organism Homo sapiens
 
Description 1152 cDNA cancer-related microarray chip manufactured by Genomic Solutions (Ann Arbor, MI). Each element spotted in duplicate.
32, nine by nine patches.
Blank spots included on array for background correction
Lambda Q spots included on array for normalization
 
Contributor(s) Snyder AR
Submission date Jul 28, 2004
Last update date May 26, 2005
Contact name Andrew Snyder
E-mail(s) asnyd002@umaryland.edu
Phone 410-706-1572
Organization name University of Maryland, Baltimore
Department Radiation Oncology Research Laboratory
Lab Room 7-010
Street address 655 West Baltimore Street
City Baltimore
State/province MD
ZIP/Postal code 21201
Country USA
 
Samples (4) GSM27710, GSM27711, GSM27712, GSM27713
Series (1)
GSE1626 Testing for gene expression differences between chromosomally stable and unstable isogenic clones

Data table header descriptions
ID
GENE_NAME common name for each gene
UNIGENE Unigene cluster ID to which this sequence belongs;
ADDRESS location on microarray chip for each element
CLONE_ID IMAGE clone from which the element was PCR amplified
GB_ACC GenBank Accession Number;

Data table
ID GENE_NAME UNIGENE ADDRESS CLONE_ID GB_ACC
1 basic leucine zipper nuclear factor 1 (JEM-1) 158205 G2.d7 IMAGE:23012 R43576
2 basic leucine zipper nuclear factor 1 (JEM-1) 158205 G2.g4 IMAGE:23012 R43576
3 fibroblast growth factor 2 (basic) 56066 G1.b8 IMAGE:23073 R38539
4 fibroblast growth factor 2 (basic) 56066 G1.h2 IMAGE:23073 R38539
5 quinoid dihydropteridine reductase 75438 D1.a9 IMAGE:23776 R38198
6 quinoid dihydropteridine reductase 75438 D1.i1 IMAGE:23776 R38198
7 opioid-binding protein/cell adhesion molecule-like 99902 D2.a4 IMAGE:23878 R38201
8 opioid-binding protein/cell adhesion molecule-like 99902 D2.d1 IMAGE:23878 R38201
9 Human clone 23933 mRNA sequence 239483 D4.g8 IMAGE:23933 R39465
10 Human clone 23933 mRNA sequence 239483 D4.h7 IMAGE:23933 R39465
11 tumor protein p53 (Li-Fraumeni syndrome) 1846 D4.b5 IMAGE:24415 R39356
12 tumor protein p53 (Li-Fraumeni syndrome) 1846 D4.e2 IMAGE:24415 R39356
13 cannabinoid receptor 1 (brain) 75110 F3.d8 IMAGE:26295 R20626
14 cannabinoid receptor 1 (brain) 75110 F3.h4 IMAGE:26295 R20626
15 replication protein A2 (32kD) 79411 D2.a5 IMAGE:26616 R39861
16 replication protein A2 (32kD) 79411 D2.e1 IMAGE:26616 R39861
17 activated leucocyte cell adhesion molecule 10247 C3.b3 IMAGE:26617 R13558
18 activated leucocyte cell adhesion molecule 10247 C3.c2 IMAGE:26617 R13558
19 crystallin, zeta (quinone reductase) 83114 E1.b6 IMAGE:28475 R13434
20 crystallin, zeta (quinone reductase) 83114 E1.f2 IMAGE:28475 R13434

Total number of rows: 2304

Table truncated, full table size 180 Kbytes.






Download family Format
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Supplementary data files not provided
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