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Platform GPL142 Query DataSets for GPL142
Status Public on Oct 01, 2002
Title Atlas Human Toxicology Array II (Cat. #7733-1)
Technology type spotted DNA/cDNA
Distribution commercial
Organism Homo sapiens
Manufacturer BD Biosciences Clontech
Manufacture protocol see manufacturer's web site
 
Description Nylon, human cDNA array designed to study toxicology. The cDNA fragments (200-600 bp) are PCR-amplified using gene-specific primers, and are selected so that they lack repetitive elements and have minimal homology with other genes on the array.
 
Web link http://www.clontech.com/atlas/index.shtml
Submission date Apr 24, 2002
Last update date Apr 09, 2008
Organization BD Biosciences Clontech
E-mail(s) tech@clontech.com
Phone 877-232-8995
URL http://www.clontech.com
Street address 1020 East Meadow Circle
City Palo Alto
State/province CA
ZIP/Postal code 94303-4230
Country USA
 

Data table header descriptions
ID unique reference number used by BD Biosciences Clontech to identify each gene in collection
GENE_NAME set of names commonly used for the gene, based on the current literature
COORDINATE array coordinate
GB_LIST GenBank accession number
SP_LIST SwissProt accession number
GENE Entrez GENE ID
DESC description
CLASSIFICATION set of functional classifications for the gene

Data table
ID GENE_NAME COORDINATE GB_LIST SP_LIST GENE DESC CLASSIFICATION
E118 serotransferrin (TF); siderophilin; beta-1-metal-binding globulin A1a M12530 P02787 7018 transferrin FF00 SF00
E186 lactotransferrin; lactoferrin A1b X53961 P02788 4057 lactotransferrin FF00 SF00
N089 apolipoprotein E (APOE) A1c M12529 P02649 348 apolipoprotein E FF00 SF00
N119 lipopolysaccharide-binding protein (LBP) A1d M35533 P18428, Q92672, O43438 3929 lipopolysaccharide-binding protein FF00 FE03 SF00
B188 B-lymphocyte kinase; tyrosine-protein kinase BLK; p55-BLK A1e Z33998 P51451 640 B lymphoid tyrosine kinase FT02 SC00
H025 apolipoprotein AI (APOA1) A1f X00566 P02647 335 apolipoprotein A-I FF00 FL05 SF00
H028 apolipoprotein AII (APOA2) A1g X00955 P02652 336 apolipoprotein A-II FF00 FL05 SF00
H029 apolipoprotein CIII (APOC3) A1h X01388 P02656 345 apolipoprotein C-III FF00 FL05 SF00
H108 endothelin 1 (ET1) A1i Y00749 P05305 1906 endothelin 1 FS03 SF00
H138 macrophage colony stimulating factor 1 (CSF1; MCSF) A1j M37435 P09603 1435 colony stimulating factor 1 (macrophage) FE03 FS02 SF00
H339 familial intrahepatic cholestasis 1 protein (FIC1) A1k AF038007 O43520 5205 ATPase, Class I, type 8B, member 1 FI09 SB00
ST016 vascular endothelial growth factor D (VEGFD); c-fos-induced growth factor (FIGF) A1l D89630 O43915 2277 c-fos induced growth factor (vascular endothelial growth factor D) FS02 SF00
ST028 complement component 4-binding protein alpha (C4B-binding protein; C4BPA); proline-rich protein (PRP) A1m M31452 P04003 722 complement component 4-binding protein, alpha FF00 FU08 SF00
9 insulin-like growth factor II (IGF2); somatomedin A A1n M29645 P01344 3481 insulin-like growth factor 2 (somatomedin A) FS02 SF00
31 colony-stimulating factor 2 (CSF2); granulocyte-macrophage colony-stimulating factor (GMCSF) A2a M11220 P04141 1437 colony stimulating factor 2 (granulocyte-macrophage) FS02 SF00
41 epidermal growth factor (EGF); beta-urogastrone (URG) A2b X04571 P01133 1950 epidermal growth factor (beta-urogastrone) FS02 SF00
167 hepatocyte growth factor activator (HGF activator) A2c D14012 Q04756, Q14726 3083 HGF activator FS02 SF00
171 macrophage inflammatory protein 1 beta (MIP1-beta); T-cell activation protein 2 (AT2); PAT 744; H400; SIS-gamma; lymphocyte activation gene 1 protein (LAG 1); HC21; small inducible cytokine subfamily A member 4 (SCYA4); G 26 T-lymphocyte secreted protein A2d J04130 P13236, P22617, Q13704 6351 small inducible cytokine A4 (homologous to mouse Mip-1b) FS02 SF00
183 neuregulin 1 (NRG1); heregulin alpha (HRGA; HGL); glial growth factor 2 (GGF2); neu differentiation factor; sensory & motor neuron-derived factor (SMDF) A2e L12260, L12261, U02326, M94165 Q02297, Q12779, Q12780, Q12784, Q07110, Q07111 3084 neuregulin 1 FS02 SF00
195 small inducible cytokine subfamily A member 5 (SCYA5); regulated on activation normal T-cell-expressed & secreted protein (RANTES); SIS delta A2f M21121 P13501, O43646 6352 small inducible cytokine A5 (RANTES) FS02 SF00

Total number of rows: 597

Table truncated, full table size 95 Kbytes.




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