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Platform GPL15025 Query DataSets for GPL15025
Status Public on Dec 16, 2011
Title Bacillus subtilis 168 Oligo Array [condensed/gene-level version]
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Bacillus subtilis
Manufacturer University of Groningen
Manufacture protocol Oligo spotted on ArrayIt Superamine slides in duplicates
Support glass
Coating aminosilane
 
Description 12pins spotting with Telechem 946MP3 pins
 
Submission date Dec 16, 2011
Last update date Dec 16, 2011
Contact name GEO admin
E-mail(s) geo@ncbi.nlm.nih.gov
Organization name NCBI/NLM/NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (45) GSM850320, GSM850321, GSM850322, GSM850323, GSM850324, GSM850325 
Series (3)
GSE34505 Comparative transcriptional analysis of bacillus subtilis cells overproducing either secreted proteins, lipoproteins or membrane proteins
GSE35154 High- and low-affinity cre boxes for CcpA binding in Bacillus subtilis revealed by genome-wide analysis
GSE64918 Transcriptional profile of Bacillus subtilis sigF-mutant during vegetative growth and under sporulating conditions
Relations
Alternative to GPL5957

Data table header descriptions
ID
GI_PROTEIN GenBank identifier
ORF locus tag
SEQUENCE sequence of oligo
GENE open reading frame designator
GENOME_ACC Genome accession number
ORGANISM

Data table
ID GI_PROTEIN ORF SEQUENCE GENE GENOME_ACC ORGANISM
BSU00010_dnaA 16077069 BSU00010 GAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCATGAAAAAATTTCAAAACTGCTGGCAGATG dnaA NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00020_dnaN 16077070 BSU00020 CCGCAAAACCGGCTGAATCCATTGAAATTTCTTCCAATTCGCCAGAAATCGGTAAAGTTGTGGAAGCAAT dnaN NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00030_yaaA 16077071 BSU00030 CGCCGGGGCAGAAAGCTGTATGTTGGAGATGTGGTAGAGATTGAAGGATTTGGTTCATTTCAAGTCGTCA yaaA NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00040_recF 16077072 BSU00040 TGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA recF NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00050_yaaB 16077073 BSU00050 GTGATGACTTTGTGGTTTCAACACGAGATATTGTCGGCATTTTTGACTTTAAAGCCAACATGTCGCCT yaaB NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00060_gyrB 16077074 BSU00060 AGGTAACTCTTGAAGATGCAATGGATGCGGATGAGACTTTTGAAATGCTTATGGGCGACAAGGTAGAACC gyrB NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00070_gyrA 16077075 BSU00070 GGACATCAATGATATCTCCATCACCGGACGTGTCACTCAAGGTGTGCGTCTCATCAGAATGGCAGAAGAA gyrA NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00080_yaaC 16077076 BSU00080 CTTGTACACACCGCCCGTCACACCACGAGAGTTTGTAACACCCGAAGTCGGTGAGGTAACCTTTTAGGAG yaaC NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00090_guaB 16077077 BSU00090 GTATGGGGTATTGCGGGTCCAAAGATCTGCGTGCGCTAAGAGAAGAAGCTCAGTTCATTCGCATGACTGG guaB NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00100_dacA 16077078 BSU00100 GTCACACTGAATAAAGACAACTTAACTGCTCCTGTGAAAAAAGGAACCAAGGTTGGGAAGCTGACTGCGG dacA NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00110_yaaD 16077079 BSU00110 TACTGCAATGAAAGGGATTGAAATCTCAAACTTACTTCCAGAACAGCGTATGCAAGAACGCGGCTGGTAA yaaD NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00120_yaaE 16077080 BSU00120 CGGAGCTGACAGAAGATCACCGAGTGACGCAGCTGTTTGTTGAAATGGTTGAGGAATATAAGCAAAAGGC yaaE NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00130_serS 16077081 BSU00130 AATCTCTTCTTGCAGCAACTTCGAAGCGTTCCAGGCGAGACGTGCGAATATTCGTTTCAGACGTGAAGCG serS NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00140_dck 16077082 BSU00140 GGAGGAATACCCAAGTCCGGCTGAAGGGATCGGTCTTGAAAACCGACAGGGGTGTCAAAGCCCGCGGGG dck NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00150_dgk 16077083 BSU00150 GATTCAAAGGATTTCGTTTTGAATAAGAGCGACTTTGAACGCATTGCCGCCCATGTAAAGGAGCTTATCG dgk NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00160_yaaH 16077084 BSU00160 GAATCAAATGCTTATTTGGAGCCCCGAGGAAATCAAGTCAGCGAAAATCTCCAGCAGGCGGCCAGAGAAG yaaH NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00170_yaaI 16077085 BSU00170 CCGCTAATGACGCTTATATGAGGGAATACAGCATCACGATTCCTAAGGACTGTATCGCGTCAAACAGTGA yaaI NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00180_yaaJ 16077086 BSU00180 GGCGGAATGCTCAGTGCGTTTTTCAGAGAACTAAGAAAAAAGAAGAAAGCCGCCAGGAAAAACTTGTCTG yaaJ NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00190_dnaX 16077087 BSU00190 GCCTTAAGTAAGTGGTGTTGACGTTTGGGTCCTGCGCAATGGGAATTCATGAACCATGTCAGGTCCGGAA dnaX NC_000964 Bacillus subtilis subsp. subtilis str. 168
BSU00200_yaaK 16077088 BSU00200 GGCGGCGGTATGGTAACAGTAAAAGCAAACGGCCAAAAAGAAATCCTGGATGTTATCATCAAAGAAGAAG yaaK NC_000964 Bacillus subtilis subsp. subtilis str. 168

Total number of rows: 4106

Table truncated, full table size 645 Kbytes.




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