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Platform GPL15065 Query DataSets for GPL15065
Status Public on Nov 10, 2012
Title Agilent-029876 Haemophilus parasuis SH0165 array (Feature Number version)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Glaesserella parasuis SH0165
Manufacturer Agilent Technologies
Manufacture protocol See manufacturer's web site at http://www.agilent.com/.
 
Description Arrays of this design have barcodes that begin with 16029876 or 2529876.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction Feature Number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
 
Submission date Dec 27, 2011
Last update date Nov 10, 2012
Contact name Liu yingyu
E-mail(s) xjlyy1028@163.com
Organization name Huazhong agricultural university
Street address Hongshan district, No.1
City Wuhan
ZIP/Postal code 430070
Country China
 
Relations
Alternative to GPL15066

Data table header descriptions
ID Agilent Feature Number
COL Column
ROW Row
NAME Name
SPOT_ID Spot identifier
CONTROL_TYPE Control type
CHROMOSOMAL_LOCATION Chromosomal Location
SEQUENCE Sequence

Data table
ID COL ROW NAME SPOT_ID CONTROL_TYPE CHROMOSOMAL_LOCATION SEQUENCE
1 96 164 GE_BrightCorner GE_BrightCorner pos
2 96 162 DarkCorner DarkCorner pos
3 96 160 DarkCorner DarkCorner pos
4 96 158 CUST_77_PI425463947 CUST_77_PI425463947 FALSE unmapped GGCAGTCTCAGCTTGATGAAGCCTATAACAGCAAAGAAGTGCTGTATCTTTTCAGTGAAA
5 96 156 CUST_1568_PI425463947 CUST_1568_PI425463947 FALSE unmapped TCACTGTGATTCGCCTGTCAGCACAAACTAAAGTCGGTGTGGATTTATTACGAGAACATC
6 96 154 CUST_1724_PI425463947 CUST_1724_PI425463947 FALSE unmapped TGACCGTATGAAACGTGAGTTCAAGGTGGAAGCAAACATCGGTAAACCACAAGTATCTTA
7 96 152 CUST_1649_PI425463947 CUST_1649_PI425463947 FALSE unmapped CGTTTTAACCCTAGGAGATAATCCTATTGGTTTGTGGCTATTTCCGCAAAATCCACAGCG
8 96 150 CUST_1920_PI425463947 CUST_1920_PI425463947 FALSE unmapped TTTCACGTTTATTTTGAAGAAATCTTAAAATCATTTAACCGATTTTTTACAAGCGGAGGA
9 96 148 CUST_1091_PI425463947 CUST_1091_PI425463947 FALSE unmapped ACCACATTTTTGTTCTTTACCTTCAGCAAAATAATCGGTATCTTGCTTGCAATTTTTCAC
10 96 146 CUST_439_PI425463947 CUST_439_PI425463947 FALSE unmapped TATGAACTCTGGCGCTATCCGTGCTTCAATCAATGAAGGTGAGGTCACTTACAAAAATCT
11 96 144 CUST_1773_PI425463947 CUST_1773_PI425463947 FALSE unmapped CACTCAACCAAGTGTGACAATTCCACATAATGATGCAAAATGGCAACAACATCTTGCACA
12 96 142 CUST_168_PI425463947 CUST_168_PI425463947 FALSE unmapped ATCAGCTCGAAGAACTCAAAACCATCTGTTATTGTGGGCGTAAAGCAGGCTTTGTTATTC
13 96 140 CUST_541_PI425463947 CUST_541_PI425463947 FALSE unmapped TCTTTTGACCTTAGGCGGAATAATTACCGGCATAACTTGGAAGATTATACTGGGTGCTGT
14 96 138 CUST_189_PI425463947 CUST_189_PI425463947 FALSE unmapped TTTGTTGGGCGTGAAATTGTTGTTCATTTACGCATTCCAATGTTAGATCGCCGTAAATGG
15 96 136 CUST_1569_PI425463947 CUST_1569_PI425463947 FALSE unmapped GCTCTAGCTATCACACCATCTATTGCGAATTCAGCAGGGTTTAAAGTACGTTCTGCTCAA
16 96 134 CUST_1432_PI425463947 CUST_1432_PI425463947 FALSE unmapped ACAGCAACTTTCTATCAAGGGTGGGAAAAAGAGAGAGATTACGCCGATCTTTTAGCACAA
17 96 132 CUST_1140_PI425463947 CUST_1140_PI425463947 FALSE unmapped TGTTAATGTTTTCGATTGGGCGTTGTTTATTTTAACGGAAACGGGTTCAACGCCTTATGC
18 96 130 CUST_354_PI425463947 CUST_354_PI425463947 FALSE unmapped ATTATCAGTGCCGTTGGACACGAAACCGATGTAACTATTGCAGATTTTGTGGCAGATTTG
19 96 128 CUST_740_PI425463947 CUST_740_PI425463947 FALSE unmapped ATATGCGGATGCGGATGCGGATGCTGATACTGATATGCTACTTGAAGCATTACTCAATAA
20 96 126 CUST_1311_PI425463947 CUST_1311_PI425463947 FALSE unmapped AGTTTTTGGAAAGCTGCGATTGCGGAATTACTCGGTTATATCCGTGGTTATGATAATGCC

Total number of rows: 15744

Table truncated, full table size 1939 Kbytes.




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