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| Status |
Public on Apr 12, 2012 |
| Title |
Agilent-028233 Danio rerio Leiden custom 180k array |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Danio rerio |
| Manufacturer |
Agilent |
| Manufacture protocol |
Agilent Ink Jet manufactured
|
| |
|
| |
|
| Submission date |
Feb 01, 2012 |
| Last update date |
Apr 12, 2012 |
| Contact name |
Michiel van der Vaart |
| Organization name |
University of Leiden
|
| Department |
IBL
|
| Lab |
Molecular cell biology
|
| Street address |
Einsteinweg 55
|
| City |
Leiden |
| ZIP/Postal code |
2333 CC |
| Country |
Netherlands |
| |
|
| Samples (136)
|
GSM869077, GSM869078, GSM869079, GSM869080, GSM869081, GSM869082
GSM869083, GSM869084, GSM869085, GSM869086, GSM869087, GSM869088, GSM914051, GSM914052, GSM914053, GSM914054, GSM914055, GSM914056, GSM914057, GSM914058, GSM914059, GSM914060, GSM914061, GSM914062, GSM914063, GSM914064, GSM914065, GSM914066, GSM914067, GSM914068, GSM914069, GSM914070, GSM914071, GSM914072, GSM914073, GSM914074, GSM914075, GSM914076, GSM914077, GSM914078, GSM1080977, GSM1080978, GSM1080979, GSM1080980, GSM1195174, GSM1195175, GSM1195176, GSM1195177, GSM1195178, GSM1195179, GSM1195180, GSM1195181, GSM1195182, GSM1195183, GSM1195184, GSM1195185, GSM1546667, GSM1546668, GSM1546669, GSM1546670, GSM1546671, GSM1546672, GSM1546673, GSM1546674, GSM1546675, GSM1546676, GSM1546677, GSM1546678, GSM1546679, GSM1546680, GSM1546681, GSM1546682, GSM1546683, GSM1546684, GSM1546685, GSM1546686, GSM1546687, GSM1546688, GSM1546689, GSM1546690, GSM1701301, GSM1701302, GSM1701303, GSM1701304, GSM1701305, GSM1701306, GSM1701307, GSM1701308, GSM1701309, GSM1701310, GSM1701311, GSM1701312, GSM1701313, GSM1701314, GSM1701315, GSM1701316, GSM1873313, GSM1873314, GSM1873315, GSM1873316, GSM1873317, GSM1873318, GSM1873319, GSM1873320, GSM1873321, GSM1873322, GSM1873323, GSM1873324, GSM1873325, GSM1873326, GSM1873327, GSM1873328, GSM1873329, GSM1873330, GSM1873331, GSM1873332, GSM1873333, GSM1873334, GSM1873335, GSM1873336, GSM2253853, GSM2253854, GSM2253855, GSM2253856, GSM2253857, GSM2253858, GSM2253859, GSM2253860, GSM2253861, GSM2253862, GSM2253863, GSM2253864, GSM2253865, GSM2253866, GSM2253867, GSM2253868
|
| Series (11)
|
| GSE35474 |
Pathogen recognition and activation of the innate immune response in zebrafish |
| GSE37227 |
Marker gene discovery for Staphylococcus epidermidis infection in zebrafish embryos (Agilent) |
| GSE42847 |
Marker gene discovery for Staphylococcus epidermidis infection in zebrafish embryos |
| GSE44226 |
Gene expression profiling of zebrafish embryos at 5 days post fertilization [Agilent Arrays] |
| GSE44352 |
Gene expression profiling of zebrafish embryos at 5 days post fertilization |
| GSE49187 |
Autophagy regulator DRAM1 functions downstream of MYD88 in defense against tuberculosis (array) |
| GSE49188 |
Autophagy regulator DRAM1 functions downstream of MYD88 in defense against tuberculosis |
| GSE63360 |
Transcriptional effects of glucocorticoid receptor alpha and beta signaling in zebrafish |
| GSE69444 |
Selective glucocorticoid-induced attenuation of the inflammatory response in zebrafish |
| GSE72839 |
Mother-specific composition of the maternal transcriptome in Zebrafish eggs |
| GSE84906 |
Functional analysis of the zebrafish glucocorticoid receptor beta-isoform |
|
| Data table header descriptions |
| ID |
Agilent FeatureNum |
| Row |
|
| Col |
|
| chr_coord |
|
| SubTypeMask |
|
| SubTypeName |
|
| Start |
|
| SEQUENCE |
Oligo Sequence |
| ProbeUID |
|
| ControlType |
|
| ProbeName |
|
| GeneName |
|
| SystematicName |
|
| Description |
|
| SPOT_ID |
|
| GB_ACC |
GenBank Accession number |
| Data table |
| ID |
Row |
Col |
chr_coord |
SubTypeMask |
SubTypeName |
Start |
SEQUENCE |
ProbeUID |
ControlType |
ProbeName |
GeneName |
SystematicName |
Description |
SPOT_ID |
GB_ACC |
| 1 |
1 |
1 |
|
260 |
BrightCorner |
0 |
|
0 |
1 |
GE_BrightCorner |
GE_BrightCorner |
GE_BrightCorner |
|
CONTROL |
|
| 2 |
1 |
2 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 3 |
1 |
3 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 4 |
1 |
4 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 5 |
1 |
5 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 6 |
1 |
6 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 7 |
1 |
7 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 8 |
1 |
8 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 9 |
1 |
9 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 10 |
1 |
10 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 11 |
1 |
11 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 12 |
1 |
12 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 13 |
1 |
13 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 14 |
1 |
14 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 15 |
1 |
15 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 16 |
1 |
16 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 17 |
1 |
17 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 18 |
1 |
18 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 19 |
1 |
19 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
| 20 |
1 |
20 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
|
Total number of rows: 180822
Table truncated, full table size 30575 Kbytes.
| Supplementary data files not provided |
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