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Status
Public on Oct 31, 2012
Title
FZ_IBT1_C. glutamicum_10K_ver2 array
Technology type
spotted oligonucleotide
Distribution
custom-commercial
Organism
Corynebacterium glutamicum ATCC 13032 Manufacturer
Operon (Cologne, Germany)
Manufacture protocol
see manufacturer's website
Description
C. glutamicum ATCC 13032, based on the genome sequence entry NC_006958
Submission date
Apr 17, 2012
Last update date
Oct 31, 2012
Contact name
Tino Polen
E-mail(s)
t.polen@fz-juelich.de Organization name
Forschungszentrum Jülich GmbH
Department
IBG-1: Biotechnology
Street address
Leo Brandt Str.
City
Juelich
State/province
NRW
ZIP/Postal code
52425
Country
Germany
Samples (19)
GSM916158 , GSM916159 , GSM916160 , GSM916161 , GSM916162 , GSM916163
GSM1091989 ,
GSM1091990 ,
GSM1091991 ,
GSM1210286 ,
GSM1210287 ,
GSM1210288 ,
GSM1210289 ,
GSM1210290 ,
GSM1591777 ,
GSM1591778 ,
GSM3302526 ,
GSM3302527 ,
GSM3302528 Series (5)
GSE37327 The two-component system ChrSA is crucial for heme tolerance and interferes with HrrSA in heme-dependent gene regulation in Corynebacterium glutamicum
GSE44812 Complex regulation of the PEP carboxykinase gene pck and characterization of its GntR-type regulator IolR as a repressor of myo-inositol utilization genes in Corynebacterium glutamicum
GSE49936 C1 metabolism in Corynebacterium glutamicum: an endogenous pathway for oxidation of methanol to carbon dioxide
GSE65294 Gene expression changes in Corynebacterium glutamicum at increased growth temperature in the absence of PPIase FkpA
GSE117530 Comparison of Corynebacterium glutamicum cultivated under copper starvation with copper sufficiency
Data table header descriptions ID Block GenePix GAL spot position Block coordinate
Column GenePix GAL spot position Column coordinate
Row GenePix GAL spot position Row coordinate
Name Spot Name (gene or control name)
Annotation Gene or Oligo Annotation
ORF locus tag
SEQUENCE oligo sequence
SPOT_ID control, empty, etc.
Data table ID Block Column Row Name Annotation ORF SEQUENCE SPOT_ID 1
1
1
1
cgtRNA_3528
Ile tRNA
cgtRNA_3528 ATAGCTCAGTCGGTTAGAGCGCATCGCTGATAACGATGAGGTCGCAAGTTCGATTCTTGCTAGGCCCACC
2
1
2
1
B. subtilis 168
control
CGCAAAAATTGAAGTAGAGTATCTAGGCTTTATTACATTACCCTTAATGAGTTCAGTATGTTTTGCATTG
control
3
1
3
1
B. subtilis 168
control
CGCAAAAATTGAAGTAGAGTATCTAGGCTTTATTACATTACCCTTAATGAGTTCAGTATGTTTTGCATTG
control
4
1
4
1
B. subtilis 168
control
CGCAAAAATTGAAGTAGAGTATCTAGGCTTTATTACATTACCCTTAATGAGTTCAGTATGTTTTGCATTG
control
5
1
5
1
Negative control 4
control
GTCGGTACTCTATCGCAAAATCGCTGATATAGCCTCACGGGAGCGGGGGGCATTCCCTAGGTACGTATTA
control
6
1
6
1
Negative control 8
control
TGGTCCAGACGTTCTGCCATGGTGGCTGGTGGACTGACCGTATCCGTTTCTACCGTCTTGACTTTAACTG
control
7
1
7
1
Alien9_A
control
GCTCACATGAGGTGCTAAAGCGACTTGGCCGGATTTAGGCAGAGCTGGTACGTTTGTGACACATACTGTT
control
8
1
8
1
Alien10_70
control
CGCCGATTCTGCATCATCCGTCGTGTATGATCTATAGCTGACAATCTGCGTTGCTTTCCATCTGCATCAC
control
9
1
9
1
Alien10
control
CCCCGAATCAGGAACATGCGTCCTCTAAGAACTTTAGGTGACCATCAGCGTAGCATACCAACTCCTTGAC
control
10
1
10
1
cg2958 (butA)
butA, L-2,3-butanediol dehydrogenase/acetoin reductase
cg2958 (butA) GTGCTAGTAAACAACGCCGGCATCGCACAAATTAAGCCACTTCTGGAAGTCACCGAAGAAGACCTAAAGC
11
1
11
1
cg0576 (rpoB)
rpoB, DNA-directed RNA polymerase beta subunit
cg0576 (rpoB) GTTCGAGACGTTCACCCATCTCACTACGGCCGTATGTGCCCAATTGAGACTCCGGAAGGTCCAAACATTG
12
1
12
1
EMPTY
EMPTY
EMPTY
13
1
13
1
cgtRNA_3528
Ile tRNA
cgtRNA_3528 ATAGCTCAGTCGGTTAGAGCGCATCGCTGATAACGATGAGGTCGCAAGTTCGATTCTTGCTAGGCCCACC
14
1
14
1
B. subtilis 168
control
CGCAAAAATTGAAGTAGAGTATCTAGGCTTTATTACATTACCCTTAATGAGTTCAGTATGTTTTGCATTG
control
15
1
15
1
B. subtilis 168
control
CGCAAAAATTGAAGTAGAGTATCTAGGCTTTATTACATTACCCTTAATGAGTTCAGTATGTTTTGCATTG
control
16
1
16
1
B. subtilis 168
control
CGCAAAAATTGAAGTAGAGTATCTAGGCTTTATTACATTACCCTTAATGAGTTCAGTATGTTTTGCATTG
control
17
1
17
1
Negative control 4
control
GTCGGTACTCTATCGCAAAATCGCTGATATAGCCTCACGGGAGCGGGGGGCATTCCCTAGGTACGTATTA
control
18
1
18
1
Negative control 8
control
TGGTCCAGACGTTCTGCCATGGTGGCTGGTGGACTGACCGTATCCGTTTCTACCGTCTTGACTTTAACTG
control
19
1
19
1
Alien9_A
control
GCTCACATGAGGTGCTAAAGCGACTTGGCCGGATTTAGGCAGAGCTGGTACGTTTGTGACACATACTGTT
control
20
1
1
2
Alien10_70
control
CGCCGATTCTGCATCATCCGTCGTGTATGATCTATAGCTGACAATCTGCGTTGCTTTCCATCTGCATCAC
control
10944 1314 Kbytes .Supplementary data files not provided
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