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Platform GPL15590 Query DataSets for GPL15590
Status Public on Dec 31, 2012
Title NimbleGen Mouse DNA Methylation 2.1M Economy Whole-Genome Tiling Arrays (3/4)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer NimbleGen
Manufacture protocol see manufacturer's website
 
Description Format: 2.1M
Format: Source: UCSC
Format: Build: MM9
Format: Probe Length: 50-75mer
Format: Median Probe Spacing: 255
 
Submission date May 21, 2012
Last update date Dec 31, 2012
Contact name Xiwei Wu
E-mail(s) xwu@coh.org
Organization name City of Hope National Medical Center
Department Computational and Quantitative Medicine
Street address 1500 E. Duarte Rd.
City Duarte
State/province CA
ZIP/Postal code 91010
Country USA
 
Samples (10) GSM935903, GSM935904, GSM935905, GSM935906, GSM935907, GSM935908 
Series (1)
GSE38118 Dynamics of 5-hydroxymethylcytosine and chromatin marks in mammalian neurogenesis

Data table header descriptions
ID
PROBE_ID
SEQ_ID
RANGE_START
RANGE_END
SEQUENCE
RANGE_GB

Data table
ID PROBE_ID SEQ_ID RANGE_START RANGE_END SEQUENCE RANGE_GB
1 CHR01FS104822790 chr1:104822766-104824081_A01 104822790 104822846 TAGGTATTTACAAACTAACAAACATACCAAAAGCCAGTGTTCATAGATCTCAGTAGG NC_000067.5
2 CHR01FS104822790 chr1:104822766-104824081_A01 104822790 104822846 TAGGTATTTACAAACTAACAAACATACCAAAAGCCAGTGTTCATAGATCTCAGTAGG NC_000067.5
3 CHR01FS104822790 chr1:104822766-104824081_A01 104822790 104822846 TAGGTATTTACAAACTAACAAACATACCAAAAGCCAGTGTTCATAGATCTCAGTAGG NC_000067.5
4 CHR01FS104822880 chr1:104822766-104824081_A01 104822880 104822940 CTGATCTGCTTGAGCAGTAGAGTTATAACTCTTTAATATGACACCAAGTTAGAGGAGTCCT NC_000067.5
5 CHR01FS104822880 chr1:104822766-104824081_A01 104822880 104822940 CTGATCTGCTTGAGCAGTAGAGTTATAACTCTTTAATATGACACCAAGTTAGAGGAGTCCT NC_000067.5
6 CHR01FS104822880 chr1:104822766-104824081_A01 104822880 104822940 CTGATCTGCTTGAGCAGTAGAGTTATAACTCTTTAATATGACACCAAGTTAGAGGAGTCCT NC_000067.5
7 CHR01FS104822970 chr1:104822766-104824081_A01 104822970 104823024 TCCATGAAGTTTGATTATTCTTTTTCCCAAAATTGTTGAGAATTATATTCAAAAA NC_000067.5
8 CHR01FS104822970 chr1:104822766-104824081_A01 104822970 104823024 TCCATGAAGTTTGATTATTCTTTTTCCCAAAATTGTTGAGAATTATATTCAAAAA NC_000067.5
9 CHR01FS104822970 chr1:104822766-104824081_A01 104822970 104823024 TCCATGAAGTTTGATTATTCTTTTTCCCAAAATTGTTGAGAATTATATTCAAAAA NC_000067.5
10 CHR01FS104823085 chr1:104822766-104824081_A01 104823085 104823134 GCAGGAATATACTAGGTTGCTGTCATTGGCTATATTCAGATGACCTGGTG NC_000067.5
11 CHR01FS104823085 chr1:104822766-104824081_A01 104823085 104823134 GCAGGAATATACTAGGTTGCTGTCATTGGCTATATTCAGATGACCTGGTG NC_000067.5
12 CHR01FS104823085 chr1:104822766-104824081_A01 104823085 104823134 GCAGGAATATACTAGGTTGCTGTCATTGGCTATATTCAGATGACCTGGTG NC_000067.5
13 CHR01FS104823170 chr1:104822766-104824081_A01 104823170 104823226 ACTACCATTCCTTGAGCATGGGCAGTTGAAAAATTGAGGAGTAAAAATTGAGCCACT NC_000067.5
14 CHR01FS104823170 chr1:104822766-104824081_A01 104823170 104823226 ACTACCATTCCTTGAGCATGGGCAGTTGAAAAATTGAGGAGTAAAAATTGAGCCACT NC_000067.5
15 CHR01FS104823170 chr1:104822766-104824081_A01 104823170 104823226 ACTACCATTCCTTGAGCATGGGCAGTTGAAAAATTGAGGAGTAAAAATTGAGCCACT NC_000067.5
16 CHR01FS104823290 chr1:104822766-104824081_A01 104823290 104823354 ACATTTGTGATGACAAAGCTTCAGCATGCAGCTATTCTAAGCTGTTCTCTATATAACAAAGCAGT NC_000067.5
17 CHR01FS104823290 chr1:104822766-104824081_A01 104823290 104823354 ACATTTGTGATGACAAAGCTTCAGCATGCAGCTATTCTAAGCTGTTCTCTATATAACAAAGCAGT NC_000067.5
18 CHR01FS104823290 chr1:104822766-104824081_A01 104823290 104823354 ACATTTGTGATGACAAAGCTTCAGCATGCAGCTATTCTAAGCTGTTCTCTATATAACAAAGCAGT NC_000067.5
19 CHR01FS104823385 chr1:104822766-104824081_A01 104823385 104823434 ACAGAAGAACTCAGAATGATGAGATGGGCTCTGAGGTATAAGAGCCACTC NC_000067.5
20 CHR01FS104823385 chr1:104822766-104824081_A01 104823385 104823434 ACAGAAGAACTCAGAATGATGAGATGGGCTCTGAGGTATAAGAGCCACTC NC_000067.5

Total number of rows: 2178447

Table truncated, full table size 271622 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL15590_100205_MM9_Economy_MeDIP_03_HX1.ndf.gz 118.6 Mb (ftp)(http) NDF
GPL15590_100205_MM9_Economy_MeDIP_03_HX1.pos.gz 16.7 Mb (ftp)(http) POS
GPL15590_100205_MM9_Economy_MeDIP_03_HX1_FT.txt.gz 59.3 Mb (ftp)(http) TXT

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