NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL157 Query DataSets for GPL157
Status Public on Oct 01, 2002
Title Atlas Rat Toxicology Array II (Cat. #7732-1)
Technology type spotted DNA/cDNA
Distribution commercial
Organism Rattus norvegicus
Manufacturer BD Biosciences Clontech
Manufacture protocol see manufacturer's web site
 
Description Nylon, rat cDNA array designed to study toxicology. The cDNA fragments (200-600 bp) are PCR-amplified using gene-specific primers, and are selected so that they lack repetitive elements and have minimal homology with other genes on the array.
 
Web link http://www.clontech.com/atlas/index.shtml
Submission date Apr 24, 2002
Last update date Apr 09, 2008
Organization BD Biosciences Clontech
E-mail(s) tech@clontech.com
Phone 877-232-8995
URL http://www.clontech.com
Street address 1020 East Meadow Circle
City Palo Alto
State/province CA
ZIP/Postal code 94303-4230
Country USA
 

Data table header descriptions
ID unique reference number used by BD Biosciences Clontech to identify each gene in collection
GENE_NAME set of names commonly used for the gene, based on the current literature
COORDINATE array coordinate
GB_LIST GenBank accession number
SP_LIST SwissProt accession number
GENE Entrez GENE ID
DESC description
CLASSIFICATION set of functional classifications for the gene

Data table
ID GENE_NAME COORDINATE GB_LIST SP_LIST GENE DESC CLASSIFICATION
RT111 GOS24 (zinc finger transcriptional regulator) A1a X63369 P47973 GOS24 (zinc finger transcriptional regulator) FB00 SN00
R264 fos-related antigen 1 (FRA1); fos-like antigen 1 (FOSL1) A1b M19651 P10158 25445 Fos-like antigen 1 FB02 SN00
R472 activating transcription factor 2 (ATF2); cAMP response element DNA-binding protein 1 (CREBP1) A1c U38938 Q00969, Q62870 activating transcription factor 2 (ATF2); cAMP response element DNA-binding protein 1 (CREBP1) FB02 SN00
132R basic transcription factor 2 44-kDa subunit (BTF2p44) [rat homolog of human] A1d Z30094 Q13888 2966 general transcription factor IIH, polypeptide 2 (44kD subunit) FB02 SN00
RT014 hepatocyte nuclear factor 4 alpha (HNF4-alpha; HNF4A); transcription factor 14 (TCF14); nuclear receptor subfamily 2 group A member 1 (NR2A1) A1e D10554 P22449 hepatocyte nuclear factor 4 alpha (HNF4-alpha; HNF4A); transcription factor 14 (TCF14); nuclear receptor subfamily 2 group A member 1 (NR2A1) FB02 SN00
RT039 activating transcription factor 3 A1f M63282 P29596 25389 Activating transcription factor 3 FB02 SN00
RT047 octamer binding protein 1 A1g U17013 Q62719, Q63387 octamer binding protein 1 FB02 SN00
RT090 octamer binding protein 2 A1h L25863 Q63732 octamer binding protein 2 FB02 SN00
S17R heat shock transcription factor 4 (HHSF4) [rat homolog of human] A1i D87673 Q99472 3299 heat shock transcription factor 4 FB02 SN00
RA1198 GATA-binding protein 4 (GATA4) A1j L22761 P46152 54254 GATA-binding protein 4 FB02 SN00
R560 jun proto-oncogene; transcription factor AP1 A1k X17163 P17325 jun proto-oncogene; transcription factor AP1 FB02 FG00 SN00
R601 c-myc proto-oncogene A1l Y00396 P09416 24577 Avian myelocytomatosis viral (v-myc) oncogene homolog FB02 FG00 SN00
A068 heat shock transcription factor 1 (HSTF1; HSF1) A1m X83094 Q63717 heat shock transcription factor 1 (HSTF1; HSF1) FB02 FQ07 SC00 SN00
84R basic transcription factor 62-kDa subunit (BTF2) [rat homolog of human] A1n M95809 P32780 2965 general transcription factor IIH, polypeptide 1 (62kD subunit) FB02 FY02 FC04 SN00
R262 early growth response protein 1 (EGR1); nerve growth factor-induced protein A (NGFI-A) A2a M18416, J04154 P08154 24330 Early growth response 1 FB03 SN00
R461 growth arrest & DNA damage-inducible protein 153 (GADD153) A2b U30186 Q62804 growth arrest & DNA damage-inducible protein 153 (GADD153) FB03 SN00
R576 RL/IF-1 A2c X63594 Q63746 RL/IF-1 FB03 SN00
RT006 CCAAT/enhancer-binding protein epsilon (C/EBP epsilon; CEBPE); C/EBP-related protein 1 (CRP1) A2d AF034716 P56261 25410 CCAAT / enhancer binding protein (C/EBP), epsilon FB03 SN00
R039 inhibitor of DNA binding 1 (ID1) A2e D10862 P41135 inhibitor of DNA binding 1 (ID1) FB03 SN00
R040 inhibitor of DNA binding 2 (ID2) A2f D10863 P41137 25587 Inhibitor of DNA binding 2, dominant negative helix-loop-helix protein FB03 SN00

Total number of rows: 474

Table truncated, full table size 70 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap