NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL15741 Query DataSets for GPL15741
Status Public on Aug 01, 2012
Title FZ_IBG-1_Goxydans_10K_Ver1 array
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Gluconobacter oxydans 621H
Manufacturer Operon (Cologne, Germany) and Microarrays Inc. (Huntsville, USA)
Manufacture protocol see manufacturer's website
 
Description spotted with 70-mer oligonucleotides obtained from Operon (Cologne, Germany)
G.oxydans 621H, based on the genome sequence entry NC_006677
 
Submission date Jun 26, 2012
Last update date Aug 01, 2012
Contact name Tino Polen
E-mail(s) t.polen@fz-juelich.de
Organization name Forschungszentrum Jülich GmbH
Department IBG-1: Biotechnology
Street address Leo Brandt Str.
City Juelich
State/province NRW
ZIP/Postal code 52425
Country Germany
 
Samples (12) GSM952423, GSM952424, GSM952425, GSM952426, GSM952427, GSM952428 
Series (2)
GSE38933 Mutational analysis of the pentose phosphate pathway and the Entner-Doudoroff pathway in Gluconobacter oxydans reveals improved growth of an edd-eda deletion mutant on mannitol
GSE42223 Glucose catabolism via a partially cyclic pentose phosphate pathway in Gluconobacter oxydans 621H: a combined fluxomics and transcriptomics analysis

Data table header descriptions
ID
Block GenePix GAL spot position Block coordinate
Column GenePix GAL spot position Column coordinate
Row GenePix GAL spot position Row coordinate
Name Spot Name (gene or control name)
SEQUENCE Oligonucleotide DNA Sequence
Annotation Gene or Oligo Annotation
ORF locus tag
SPOT_ID control, empty

Data table
ID Block Column Row Name SEQUENCE Annotation ORF SPOT_ID
1 1 1 1 GOX0820 AGGCTCTTGAAGCACAGGTTGCGGAACTCAAGGACCGCTGGGTCCGTTCCGAAGC GrpE protein (HSP-70 cofactor) GOX0820
2 1 2 1 GOX0168 TGGAAAAACTGCGGAGCTGGGGGTTCACGGTCAATCCGCTCTCCCAGATGATTGCCCATGC NAD-dependent DNA ligase GOX0168
3 1 3 1 GOX2030 GCGGTACCAGCGATTTCTCGGTCATGCGTTTTGATCCGCATGGAAGCCAGCGTGTCACAACG Chaperone protein DnaK GOX2030
4 1 4 1 GOX1564 TGAGCACAGACAATAACCCGCTCAGCATCACCTATTCCGACGGTAACACCTATATTGGCGTCTGCTTC hypothetical protein GOX1564 GOX1564
5 1 5 1 GOX1451 CAAAATCATCCGCGTCATGCGGAAGTTCGATGAAACAGCGCCCCACTCCGTTCTCTTGGTTCTGGACGC Cell division protein FtsY-like protein GOX1451
6 1 6 1 GOX0702 GGATGCGATCCGCGGGCTGGATACGGGTGCGGACGACTATCTGATGAAGCCATGCAG Phosphate regulon response regulator PhoB GOX0702
7 1 7 1 GOX0455 AGGCCGGCGTTTTTCTTTCCGAGATCCAGACCTTCGAGCCTGCGATCCACGAGCATGTCG Mannose-6-phosphate isomerase GOX0455
8 1 8 1 GOX0827 TCCACTTCTGGCGGCTGCTCTGGCTTTTTCTCTCATCGCCCTGTCCGGAACAGGCGTATTTTCCAC hypothetical protein GOX0827 GOX0827
9 1 9 1 GOX1919 TGAGGGAGGGACTGCTTAGGAGAGAGATCATGCCTCAGGCTACCAATGATCAGATGCTCAACCTTCTGTG Transcriptional regulator GOX1919
10 1 10 1 GOX0400 GTGATCATCCTCGGATCAGTCTCATCCGGCGCTGAGATCGTGGCCGCGGGGTCCATTCACGTATAC septum formation inhibitor GOX0400
11 1 11 1 GOX2428 ATCGCATTGTCGAGGCCGTCTTCGAGGCGTCTGGCAATCAGATCGCCTGGTCCTC hypothetical protein GOX2428 GOX2428
12 1 12 1 GOX0410 ATGCCGAGACCTTTGTCCTGGGCAAGAAGGCCGTTTCGGGGGATGCGACCCTGTTCAATTC leucyl-tRNA synthetase GOX0410
13 1 13 1 GOX2497 CGAGCTTCGCATCATCGTCATGAATGCGGGCACCGAACCCTTCACTGTCGAGCGTGG Deoxyuridine 5'-triphosphate nucleotidohydrolase GOX2497
14 1 14 1 GOX0063 TCGAACCGTCCAGTCTGACTGCTGTCCTGAAGCCACTGGAAGATCCCACGTTCGATATCGGAACACTGGC 3-deoxy-manno-octulosonate cytidylyltransferase GOX0063
15 1 15 1 GOX2076 GTCCGACAGGATGGACGCTTATGCCGTTGTCAGGCTCGTGGAAGGAACACCAGCCCTGAGGGATATG Putative transcriptional regulator GOX2076
16 1 16 1 GOX1539 ATTTCTGGCCATCTGCTGCAGAGGGAGAGAACGATCACTCCTCAAAAGGGGACGTCATCATTGG Putative acetyltransferase GOX1539
17 1 17 1 GOX1906 CGTCGCAGATCATGGGCGCCATCCTTGTTTTCAGACTTTTCTATTACATCATTCCGCTGCTTCTCGCCGG hypothetical protein GOX1906 GOX1906
18 1 18 1 GOX1079 GGGTATATTGCGTCGGTCTGCAGACCATGCGAGAAGCCGACAGGGTTTGTCCCCCGTCTTTTTCCAGTC hypothetical protein GOX1079 GOX1079
19 1 1 2 GOX1114 AACCATCGCATCCTCGGTCTGCGCTACCGAAGAGGGACGGCATTTCTGCCCGATTGAAACCGGATTTTC Vitamin B12-dependent ribonucleotide reductase GOX1114
20 1 2 2 GOX0815 GGATGAGGCAGTGGTGCAGTATGTGAAGTCGGACCCGGCCTATCCCGCATTTTTC hypothetical protein GOX0815 GOX0815

Total number of rows: 8640

Table truncated, full table size 1042 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL15741_GOX-621H.GAL.gz 92.8 Kb (ftp)(http) GAL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap