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Platform GPL16102 Query DataSets for GPL16102
Status Public on Dec 18, 2013
Title Agilent-035154 HFM87_33500_exp_v2 (Probe Name version)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Haloferax mediterranei
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description Arrays of this design have barcodes that begin with 16035154 or 2535154.

The ID column represents the Agilent Probe name.

*** The ID column includes the Agilent Probe Names. A different version of this platform with the Agilent Feature Extraction feature numbers in the ID column is assigned accession number GPL15465
 
Submission date Sep 25, 2012
Last update date Dec 20, 2013
Contact name Lei Cai
Organization name Institute of Microbiology, Chinese Academy of Sciences
Street address No.1 Beichen West Road, Chaoyang District,
City Beijing
ZIP/Postal code 100101
Country China
 
Samples (6) GSM1009004, GSM1009005, GSM1009006, GSM1009007, GSM1009008, GSM1009009
Series (1)
GSE41134 Genes differentially expressed in Haloferax mediterranei strains, DF50 and ΔdeoR2, with or without induction by fructose

Data table header descriptions
ID Agilent Probe Name
SPOT_ID Spot identifier
CONTROL_TYPE Control type
SEQUENCE Sequence
CHROMOSOMAL_LOCATION Chromosomal Location

Data table
ID SPOT_ID CONTROL_TYPE SEQUENCE CHROMOSOMAL_LOCATION
GE_BrightCorner --GE_BrightCorner pos
DarkCorner --DarkCorner pos
HFM87_1 HFM87_1 FALSE TATAATCTCTCGCGGATGAACTCGGAACTCGACAACTCGCGGATTTCTATCATGGGTATC unmapped
HFM87_10 HFM87_10 FALSE CTCGCTGAGATTCTGCTCGCACTCGACTACGAGAAAGACGACTACGACACGCCGCGAATC unmapped
HFM87_100 HFM87_100 FALSE GAGTAAACTATCTCAACGTCGGATTCGGCGTCGCGCAGGTGCTTTTAGTTCCGTTCGTAC unmapped
HFM87_1000 HFM87_1000 FALSE CTGCATTACTGTCTCCACTGTGATGCGTACATGTTCGTCGACGAGTCGGTGTACGTCATG unmapped
HFM87_1001 HFM87_1001 FALSE GAGACAGTTCCTCGATTCTATCACATCTACGGTCCCGACGAATTCGACGCCGACCTCGAT unmapped
HFM87_1002 HFM87_1002 FALSE GGAGATGATTACCTACCTCCTCGTCATCTACATCTCGTTTTTCGTCTTTCTCGGCATCAT unmapped
HFM87_1003 HFM87_1003 FALSE TACACAGACATCGGGACGAACATCGCCTTCAGAAAGGAGGAACTCGATAACTTCGTCATC unmapped
HFM87_1004 HFM87_1004 FALSE CGAACATCGCTGGGGTGAGCCTTCTGTACGTCAGATTTCCGTTCGCCGAAATCCAGTATG unmapped
HFM87_1005 HFM87_1005 FALSE GATGTCTCTATCGAAGGTGAGCACTTTGCGACCTTTGAGAAGTCGACGTTCCTTGTCTAC unmapped
HFM87_1006 HFM87_1006 FALSE ATGGAGGAACTGCACGGAACAGAACTCCGAGGCAGTGGTTTTCTCGTATTGCCTATCAAG unmapped
HFM87_1007 HFM87_1007 FALSE GAATCAGTCGAGGTACTGAACAGTAACGGAGGTATCCAGATTCACACGTGGGATGAAGAC unmapped
HFM87_1008 HFM87_1008 FALSE TTTCGACTTCGTGGGGTGAATGCGTATCTCGTTTCCGACGATGGCGACGTGGTTCTCGTC unmapped
HFM87_1009 HFM87_1009 FALSE TCACTGCTCGTGTATCTCGGTAGCTTCGGGTGGTACCTCAGCACAACTGGTTCAGAGTTC unmapped
HFM87_101 HFM87_101 FALSE CTTCGATGTCGCGGTAGAGCGGGCACTTCTCGAAGAAGAACGGGAATCGACGACGGTTAC unmapped
HFM87_1010 HFM87_1010 FALSE GACCACACCGGCTTGGCAGGTGAACTACAGGCTGAAAGTGGCGCGTCAGTCTACGTCCAC unmapped
HFM87_1011 HFM87_1011 FALSE GAGGACCACACCTTCATGAACGTGCTGAAGGGTGAACTCCTCGAGACCGAAAGCGTCACT unmapped
HFM87_1012 HFM87_1012 FALSE CTCGATTACTTCGACCCCGACTCGAACCTCCGATACGAACTCGAACTACAGGAGTACGAC unmapped
HFM87_1013 HFM87_1013 FALSE CTCTATCTTCCACTTCGACGAGTACTCGATTCAGGACGTAAAGGAGTACCTCGACGACCA unmapped

Total number of rows: 3943

Table truncated, full table size 371 Kbytes.




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Supplementary file Size Download File type/resource
GPL16102_035154_D_GEO_20120924.txt.gz 457.2 Kb (ftp)(http) TXT

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