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| Status |
Public on Nov 01, 2012 |
| Title |
NimbleGen Arabidopsis thaliana 4x72K Array [080306_AT6_expr] |
| Technology type |
in situ oligonucleotide |
| Distribution |
commercial |
| Organism |
Arabidopsis thaliana |
| Manufacturer |
NimbleGen |
| Manufacture protocol |
see manufacturer's web site www.nimblegen.com
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| Description |
Gene Expression array
Design Name: 080306_AT6_expr
Design_ID: 7225
Format: 4x72K
Source: TAIR
Build: 6.0
Probe Length: 60mer
FEAT_TYPE: transcript
The Platform data table reflects a condensed, gene-level representation of the array.
NimbleGen description files linked below:
080306_AT6_expr.ndf
080306_AT6_expr.ngd
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| Submission date |
Oct 31, 2012 |
| Last update date |
Nov 01, 2012 |
| Contact name |
Simon Rasmussen |
| E-mail(s) |
simon@cbs.dtu.dk
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| Phone |
+45 4525 6148
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| Organization name |
Technical University of Denmark
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| Department |
Department of Systems Biology
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| Lab |
Center for Biological Sequence Analysis
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| Street address |
Kemitorvet, Building 208
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| City |
Kongens Lyngby |
| ZIP/Postal code |
DK-2800 |
| Country |
Denmark |
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| Samples (207)
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GSM1027678, GSM1027679, GSM1027680, GSM1027681, GSM1027682, GSM1027683
GSM1027684, GSM1027685, GSM1027686, GSM1027687, GSM1027688, GSM1027689, GSM1027690, GSM1027691, GSM1027692, GSM1027693, GSM1027694, GSM1027695, GSM1027696, GSM1027697, GSM1027698, GSM1027699, GSM1027700, GSM1027701, GSM1027702, GSM1027703, GSM1027704, GSM1027705, GSM1027706, GSM1027707, GSM1027708, GSM1027709, GSM1027710, GSM1027711, GSM1027712, GSM1027713, GSM1027714, GSM1027715, GSM1027716, GSM1027717, GSM1027718, GSM1027719, GSM1027720, GSM1027721, GSM1027722, GSM1027723, GSM1027724, GSM1027725, GSM1027726, GSM1027727, GSM1027728, GSM1027729, GSM1027730, GSM1027731, GSM1027732, GSM1027733, GSM1027734, GSM1027735, GSM1027736, GSM1027737, GSM1027738, GSM1027739, GSM1027740, GSM1027741, GSM1027742, GSM1027743, GSM1027744, GSM1027745, GSM1027746, GSM1027747, GSM1027748, GSM1027749, GSM1027750, GSM1027751, GSM1027752, GSM1027753, GSM1027754, GSM1027755, GSM1027756, GSM1027757, GSM1027758, GSM1027759, GSM1027760, GSM1027761, GSM1027762, GSM1027763, GSM1027764, GSM1027765, GSM1027766, GSM1027767, GSM1027768, GSM1027769, GSM1027770, GSM1027771, GSM1027772, GSM1027773, GSM1027774, GSM1027775, GSM1027776, GSM1027777, GSM1027778, GSM1027779, GSM1027780, GSM1027781, GSM1027782, GSM1027783, GSM1027784, GSM1027785, GSM1027786, GSM1027787, GSM1027788, GSM1027789, GSM1027790, GSM1027791, GSM1027792, GSM1027793, GSM1027794, GSM1027795, GSM1027796, GSM1027797, GSM1027798, GSM1027799, GSM1027800, GSM1027801, GSM1027802, GSM1027803, GSM1027804, GSM1027805, GSM1027806, GSM1027807, GSM1027808, GSM1027809, GSM1027810, GSM1027811, GSM1027812, GSM1027813, GSM1027814, GSM1027815, GSM1027816, GSM1027817, GSM1027818, GSM1027819, GSM1027820, GSM1027821, GSM1027822, GSM1027823, GSM1027824, GSM1027825, GSM1027826, GSM1027827, GSM1027828, GSM1027829, GSM1027830, GSM1027831, GSM1027832, GSM1027833, GSM1027834, GSM1027835, GSM1027836, GSM1027837, GSM1027838, GSM1027839, GSM1027840, GSM1027841, GSM1027842, GSM1027843, GSM1027844, GSM1027845, GSM1027846, GSM1027847, GSM1027848, GSM1027849, GSM1027850, GSM1027851, GSM1027852, GSM1027853, GSM1027854, GSM1027855, GSM1027856, GSM1027857, GSM1027858, GSM1027859, GSM1027860, GSM1027861, GSM1027862, GSM1027863, GSM1027864, GSM1027865, GSM1027866, GSM1027867, GSM1027868, GSM1027869, GSM1027870, GSM1027871, GSM1027872, GSM1027873, GSM1027874, GSM1027875, GSM1027876, GSM1027877, GSM1027878, GSM1027879, GSM1027880, GSM1027881, GSM1027882, GSM1027883, GSM1027884
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| Series (1) |
| GSE41935 |
Transcriptome responses to combined biotic and abiotic stresses in Arabidopsis thaliana |
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| Data table header descriptions |
| ID |
Based on SEQ_ID from .ngd file |
| ORF |
Locus tag |
| CHROMOSOME |
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| START |
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| STOP |
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| DESCRIPTION |
Transcript description |
| Data table |
| ID |
ORF |
CHROMOSOME |
START |
STOP |
DESCRIPTION |
| AT1G01010 |
AT1G01010 |
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ExemplarFor 'AT1G01010'; gene_id 'N/A'; transcript_id 'AT1G01010'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01020 |
AT1G01020 |
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ExemplarFor 'AT1G01020'; gene_id 'N/A'; transcript_id 'AT1G01020'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01030 |
AT1G01030 |
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ExemplarFor 'AT1G01030'; gene_id 'N/A'; transcript_id 'AT1G01030'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01040 |
AT1G01040 |
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ExemplarFor 'AT1G01040'; gene_id 'N/A'; transcript_id 'AT1G01040'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01050 |
AT1G01050 |
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ExemplarFor 'AT1G01050'; gene_id 'N/A'; transcript_id 'AT1G01050'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01060 |
AT1G01060 |
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ExemplarFor 'AT1G01060'; gene_id 'N/A'; transcript_id 'AT1G01060'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01070 |
AT1G01070 |
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ExemplarFor 'AT1G01070'; gene_id 'N/A'; transcript_id 'AT1G01070'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01080 |
AT1G01080 |
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ExemplarFor 'AT1G01080'; gene_id 'N/A'; transcript_id 'AT1G01080'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01090 |
AT1G01090 |
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ExemplarFor 'AT1G01090'; gene_id 'N/A'; transcript_id 'AT1G01090'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01100 |
AT1G01100 |
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ExemplarFor 'AT1G01100'; gene_id 'N/A'; transcript_id 'AT1G01100'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01110 |
AT1G01110 |
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ExemplarFor 'AT1G01110'; gene_id 'N/A'; transcript_id 'AT1G01110'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01120 |
AT1G01120 |
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ExemplarFor 'AT1G01120'; gene_id 'N/A'; transcript_id 'AT1G01120'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01130 |
AT1G01130 |
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ExemplarFor 'AT1G01130'; gene_id 'N/A'; transcript_id 'AT1G01130'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01140 |
AT1G01140 |
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ExemplarFor 'AT1G01140'; gene_id 'N/A'; transcript_id 'AT1G01140'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01150 |
AT1G01150 |
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ExemplarFor 'AT1G01150'; gene_id 'N/A'; transcript_id 'AT1G01150'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01160 |
AT1G01160 |
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ExemplarFor 'AT1G01160'; gene_id 'N/A'; transcript_id 'AT1G01160'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01170 |
AT1G01170 |
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ExemplarFor 'AT1G01170'; gene_id 'N/A'; transcript_id 'AT1G01170'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01180 |
AT1G01180 |
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ExemplarFor 'AT1G01180'; gene_id 'N/A'; transcript_id 'AT1G01180'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01190 |
AT1G01190 |
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ExemplarFor 'AT1G01190'; gene_id 'N/A'; transcript_id 'AT1G01190'; gene_name 'N/A'; alt 'N/A'; N/A |
| AT1G01200 |
AT1G01200 |
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ExemplarFor 'AT1G01200'; gene_id 'N/A'; transcript_id 'AT1G01200'; gene_name 'N/A'; alt 'N/A'; N/A |
Total number of rows: 30380
Table truncated, full table size 4198 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL16226_080306_AT6_expr.ndf.gz |
7.1 Mb |
(ftp)(http) |
NDF |
| GPL16226_080306_AT6_expr.ngd.gz |
554.4 Kb |
(ftp)(http) |
NGD |
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