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Platform GPL16267 Query DataSets for GPL16267
Status Public on Jan 01, 2013
Title [skychip1d520579] Affymetrix Human AMLprofiler Array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
 
Description It is an RNA chip, however, we employ the SNP algorithm DM from the Affymetrix Power tools.
 
Submission date Nov 09, 2012
Last update date Jan 01, 2013
Contact name Martin van Vliet
E-mail(s) m.vanvliet@skylinedx.com
Organization name SkylineDx
Department Bioinformatics
Street address Lichtenauerlaan 40
City Rotterdam
ZIP/Postal code 3062 ME
Country Netherlands
 
Samples (648) GSM1034610, GSM1034611, GSM1034612, GSM1034613, GSM1034614, GSM1034615 
Series (3)
GSE42194 Detection of mutant NPM1 mRNA in acute myeloid leukemia (AML) using custom gene expression arrays [Training cohort]
GSE42200 Detection of mutant NPM1 mRNA in acute myeloid leukemia (AML) using custom gene expression arrays [Validation cohort]
GSE42202 Detection of mutant NPM1 mRNA in acute myeloid leukemia (AML) using custom gene expression arrays

Data table header descriptions
ID
GB_ACC GenBank Accession Number
Gene Symbol

Data table
ID GB_ACC Gene Symbol
1_NM_004119-31 NM_004119 FLT3
2_NM_004119-31 NM_004119 FLT3
3_NM_004119-31 NM_004119 FLT3
1_NM_004119-32 NM_004119 FLT3
2_NM_004119-32 NM_004119 FLT3
3_NM_004119-32 NM_004119 FLT3
1_NM_004119-33 NM_004119 FLT3
2_NM_004119-33 NM_004119 FLT3
3_NM_004119-33 NM_004119 FLT3
1_NM_000222-21 NM_000222 KIT
2_NM_000222-21 NM_000222 KIT
3_NM_000222-21 NM_000222 KIT
1_NM_000222-22 NM_000222 KIT
2_NM_000222-22 NM_000222 KIT
3_NM_000222-22 NM_000222 KIT
1_NM_000222-23 NM_000222 KIT
2_NM_000222-23 NM_000222 KIT
3_NM_000222-23 NM_000222 KIT
1_NM_033360-G12G13-22 NM_033360 KRAS
2_NM_033360-G12G13-22 NM_033360 KRAS

Total number of rows: 133

Table truncated, full table size 4 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL16267_skychip1_geno_APTsuited.cdf.gz 360.0 Kb (ftp)(http) CDF

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