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Platform GPL16338 Query DataSets for GPL16338
Status Public on Apr 08, 2020
Title Agilent-024712 Aspergillus nidulans chip
Technology type in situ oligonucleotide
Distribution non-commercial
Organism Aspergillus nidulans FGSC A4
Manufacturer Agilent
Manufacture protocol Agilent 60-mer oligonucleotide high-density arrays 4644 K with 42 034 available features. Oligonucleotides were designed with the eArray software from Agilent.
 
 
Submission date Nov 29, 2012
Last update date Apr 08, 2020
Contact name Istvan Pocsi
E-mail(s) pocsi.istvan@science.unideb.hu
Phone +3652512900
Fax +3652454400
URL http://dragon.unideb.hu/~pocsi/
Organization name University of Debrecen
Department Dept.of Microbiology and Biotechnology
Street address Egyetem tér 1.
City Debrecen
ZIP/Postal code H-4010
Country Hungary
 
Samples (1) GSM1045787
Series (1)
GSE42610 Transcriptome changes initiated by carbon starvation in Aspergillus nidulans (Microbiology-SGM, 2013, Vol:159)

Data table header descriptions
ID
ORF accession number of the locus
Locus_ID2 ID of the probe (raw matrix)
Description description of the encoded protein
Gene_name gene/protein name if awailable
SEQUENCE
ProbeName

Data table
ID ORF Locus_ID2 Description Gene_name SEQUENCE ProbeName
1 AN0001 AN1T_10562 ATAAAGGCTAAAGCGACATGACCTACCCCTATGACCTGTACTTCCTACATGAAGAAAGGG C00001_AN1T_10562
2 AN0004 AN1T_08128 Possible pseudogene, Gypsy element-related CTTTCTCATTTCTTCTTTAGCGATTCCTTCTGAGGGTACGGCACGTCTAGATAGGAAGAT C00002_AN1T_08128
3 AN0005 AN1T_08130 Uncharacterized ORF TTTGCTTTTAGTGAAAAGATTGGAACCTTTCTGTTGCCCTACACCTTGCCATCTTCCTAA C00003_AN1T_08130
4 AN0006 AN1T_08131 Uncharacterized ORF AACATACGCACAACTCAGAGAGTTTTCAGGAGTCTAGGAAGAAATTTGAGGGCGTGGATG C00004_AN1T_08131
5 AN0007 AN1T_08132 Uncharacterized ORF AACATTGCAATGGCATTCGAGCTCGCGAAGGATCTTGTTAAAATAGGACGAACTGAGCAT C00005_AN1T_08132
6 AN0008 AN1T_08133 Possible pseudogene, similar to cytochrome P450 CYP669A1P ATTGGGAGATTGAAATCTGCATTCGCTGAAACCCACGAATTCATCCCTGAATGGTGGTAT C00006_AN1T_08133
7 AN0009 AN1T_08135 Uncharacterized ORF AATTATGGAGTGGTCGTGGGTACGGAAGACCTCATTCTCAACGAAGCTAAAACTGAAGCT C00007_AN1T_08135
8 AN0010 AN1T_08136 Possible pseudogene, similar to amino acid transporter ATCGTGGCTAACAACATAGGTTCGGCGTTTTCCTGTGCCGATAACTCGAACTCCTCTTGA C00008_AN1T_08136
9 AN0011 AN1T_08137 Possible pseudogene CGACCGATTAGGATCCAGAAGGACGTTGTTGTTGAGCAGAGCTTCGAGTATGTAAAATAA C00009_AN1T_08137
10 AN0012 AN1T_08138 Uncharacterized ORF; Ortholog of <i>A. fumigatus</i> Afu5g10930 TACGATATCAAGACGACGATTGCGCATGATCGGCAGTTCCATTTTCGTGTGGGTCTTTAT C00010_AN1T_08138
11 AN0013 AN1T_08140 Possible pseudogene TCCTTATTGAGACTCGCTACACACCGATGGAGGAAATCGCTAAGTATTTTGACGGAGATA C00011_AN1T_08140
12 AN0014 AN1T_08141 Uncharacterized ORF TACAAAAAGATACCCTACAGCCTGACGAGCGTCCTATGAAAAATGAATGGGTTGCGGTTG C00012_AN1T_08141
13 AN0015 AN1T_08144 Uncharacterized ORF; Ortholog of <i>A. fumigatus</i> Afu5g00340, Afu5g12720 and abcB ATCCTTGATTATGATAAGGTTGTGGTGCTGGATTCTGGTCGGGTTATAGAGTGCGAGGAT C00013_AN1T_08144
14 AN0016 AN1T_08145 Uncharacterized ORF; <I>A. fumigatus</I> ortholog nrps1 has role in fungal-type cell wall organization AATCAAAAAACATTCCAACTTGATACATCCTTCTACGACCTAGGTGGCGACCTCTTTGCC C10886_AN1T_08145
15 AN0017 AN1T_08146 Uncharacterized ORF GCGGAGGAAGTGCTCAAAATAAGAGAAGTTTTGAGAGAACGAGGCGCACTATATGAGTAG C00015_AN1T_08146
16 AN0018 AN1T_08147 Possible pseudogene TGCACCACAATTGTGGGAAGTCTTTTAATCGAATGGCGCTCGATTAAGCAGAAGCAATCG C00016_AN1T_08147
17 AN0019 AN1T_08149 Uncharacterized ORF AGATATTTTTATGGAGGCGATGAGTACAGTGAGTAATTCAGACACAGGTAGGGCAAGGGC C00017_AN1T_08149
18 AN0020 AN1T_08150 Uncharacterized ORF; Ortholog of <i>A. fumigatus</i> Afu2g00190 ATGCATACACGCAGGACTGTTTCTCGCATGATATCTGTTCTTACTTTGCGAATGCAAGCG C00018_AN1T_08150
19 AN0021 AN1T_08151 Uncharacterized ORF TAGATTATCGGAAGGTACCTATTGAGGTTGATGTTGGGTTCTCGGGGTGCTTCATTCTAC C00019_AN1T_08151
20 AN0022 AN1T_08152 Uncharacterized ORF; Putative alpha-1,4-galactosidase aglA AACAAAGATATCGGTTGTCATTCTCCACCACTCCAGTTAGTGTACCAGACCAAGCTTCGA C00020_AN1T_08152

Total number of rows: 10701

Table truncated, full table size 1839 Kbytes.




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