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Platform GPL16454 Query DataSets for GPL16454
Status Public on Jan 06, 2013
Title UIUC Cattle 7,872-element cDNA - condensed version
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Bos taurus
Manufacturer W.M. Keck Center, University of Illinois Urbana-Champaign
Manufacture protocol cDNAs were printed in 3xSSC/1.5M betaine on amino-silane coated slides.
 
Description The 7,872 cDNAs used in this microarray were obtained from normalized and subtracted cattle placenta and spleen cDNA libraries (see Band et al., 2002 Anim. Biotechnol. 13:163-172; Everts et al., 2005 Vet. Immunol. Immunopathol. 105:235-245). Positive controls include beta actin (ACTB), glyceraldehyde-3-phosphate dehydrogenase (GAPDH), and hypoxanthine phosphoribosyltransferase (HPRT). Exogenous spiking controls are the soybean genes chlorophyll ab binding protein (CAB), Rubisco small chain 1 (RBS1), and major latex protein (MSG). Negative controls are Cot1 DNA, genomic DNA, spotting buffer, poly-A, and water. All PCR products were printed in duplicate on the array. This is an alternative version of GPL2108. Keywords: cDNA, cow, bovine, microarray
 
Web link http://cagst.animal.uiuc.edu
Submission date Jan 04, 2013
Last update date Jan 06, 2013
Contact name GEO admin
E-mail(s) geo@ncbi.nlm.nih.gov
Organization name NCBI/NLM/NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (19) GSM1060361, GSM1060362, GSM1060363, GSM1060364, GSM1060365, GSM1060366 
Series (1)
GSE43307 Feed restriction, but not L-carnitine infusion, affects the liver transcriptome with an evident and inhibition of energy production and sterol synthesis and increase of gluconeogenesis in mid-lactating dairy cows
Relations
Alternative to GPL2864

Data table header descriptions
ID
GB_ACC GenBank accession number

Data table
ID GB_ACC
AW461328 AW461328
AW461329 AW461329
AW461330 AW461330
AW461331 AW461331
AW461332 AW461332
AW461333 AW461333
AW461334 AW461334
AW461336 AW461336
AW461337 AW461337
AW461338 AW461338
AW461340 AW461340
AW461341 AW461341
AW461342 AW461342
AW461343 AW461343
AW461344 AW461344
AW461346 AW461346
AW461349 AW461349
AW461351 AW461351
AW461353 AW461353
AW461355 AW461355

Total number of rows: 7871

Table truncated, full table size 138 Kbytes.




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Supplementary data files not provided

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