GEO help: Mouse over screen elements for information.
Status
Public on Dec 23, 2019
Title
Agilent-023490 Wilson Modified Zebrafish V2 Microarray
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Danio rerio Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
A modified version of the Zebrafish V2 microarray. Includes 20 custom probes for P450s and Nuclear Receptors.
Submission date
Jan 14, 2013
Last update date
Dec 23, 2019
Contact name
Andrew G. McArthur
E-mail(s)
mcarthua@mcmaster.ca Organization name
McMaster University
Department
Biochemistry & Biomedical Sciences
Street address
1280 Main Street West
City
Hamilton
State/province
Ontario
ZIP/Postal code
L8S 4K1
Country
Canada
Samples (96)
GSM1064030 , GSM1064031 , GSM1064032 , GSM1064033 , GSM1064034 , GSM1064035
GSM1064036 ,
GSM1064037 ,
GSM1064038 ,
GSM1064039 ,
GSM1064040 ,
GSM1064041 ,
GSM1064042 ,
GSM1064043 ,
GSM1064044 ,
GSM1064045 ,
GSM1064046 ,
GSM1064047 ,
GSM1064048 ,
GSM1064049 ,
GSM1064050 ,
GSM1064051 ,
GSM1064052 ,
GSM1064053 ,
GSM1064054 ,
GSM1064055 ,
GSM1064056 ,
GSM1064057 ,
GSM1064058 ,
GSM1064059 ,
GSM1064060 ,
GSM1064061 ,
GSM1064062 ,
GSM1064063 ,
GSM1064064 ,
GSM1064065 ,
GSM1064066 ,
GSM1064067 ,
GSM1064068 ,
GSM1064069 ,
GSM1064070 ,
GSM1064071 ,
GSM1064072 ,
GSM1064073 ,
GSM1064074 ,
GSM1064075 ,
GSM1064076 ,
GSM1064077 ,
GSM1064078 ,
GSM1064079 ,
GSM1064080 ,
GSM1064081 ,
GSM1064082 ,
GSM1064083 ,
GSM1064084 ,
GSM1064085 ,
GSM1064086 ,
GSM1064087 ,
GSM1064088 ,
GSM1064089 ,
GSM1064090 ,
GSM1064091 ,
GSM1064092 ,
GSM1064093 ,
GSM1064094 ,
GSM1064095 ,
GSM1064096 ,
GSM1064097 ,
GSM1064098 ,
GSM1064099 ,
GSM1064100 ,
GSM1064101 ,
GSM1064102 ,
GSM1064103 ,
GSM1064104 ,
GSM1064105 ,
GSM1064106 ,
GSM1064107 ,
GSM1064108 ,
GSM1064109 ,
GSM1064110 ,
GSM1064111 ,
GSM1064112 ,
GSM1064113 ,
GSM1064114 ,
GSM1064115 ,
GSM1064116 ,
GSM1064117 ,
GSM1064118 ,
GSM1064119 ,
GSM1064120 ,
GSM1064121 ,
GSM1064122 ,
GSM1064123 ,
GSM1064124 ,
GSM1064125 Series (1)
GSE43491 Hepatic transcriptional responses of zebrafish to chronic, low dose pharmaceutical exposures
Data table header descriptions ID CONTROL_TYPE GENE_SYMBOL GB_ACC ACCESSIONS CHROMOSOMAL_LOCATION DESCRIPTION SEQUENCE SPOT_ID
Data table ID CONTROL_TYPE GENE_SYMBOL GB_ACC ACCESSIONS CHROMOSOMAL_LOCATION DESCRIPTION SEQUENCE SPOT_ID A_15_P100002
FALSE
siae
NM_200289 NM_200289
chr18:32868035-32868094
sialic acid acetylesterase
GCTGAAGTCTACCGCAGTATTTCTACTGAGTTCAATAGTTTGCACTTTATGATTATGATT
A_15_P100003
FALSE
loc795299
BE017922 BE017922
chr6:49391172-49386726
hypothetical protein LOC795299
CGTTCCAAACACCAACAGCACTATCTAATGCTTAATCTCAGTGAACGGAGGCATGACATC
A_15_P100007
FALSE
zgc:114184
NM_001025179 NM_001025179
chr25:11041634-11041693
hypothetical protein LOC574000
TGTTTGTTTGATGGAGATACGTTTAAAATCATTTTTCTGAACGTACAAACATGCTCTGGC
A_15_P100008
FALSE
klhl20
NM_213001 NM_213001
chr2:28561159-28561218
kelch-like 20 (Drosophila)
AACGAACACCTTTGTTTTCTCACAAAACAGTTCTGTGTTCTAATCTTGGTGTTGAAATAC
A_15_P100009
FALSE
wu:fb74f10
CF347571 CF347571
chr13:215313-215372
wu:fb74f10
AGGATTGTTTTTTCGTTTTGAATATCGTAGCCTAAATGTTGTCTTCCATGTGAATACCAC
A_15_P100010
FALSE
zgc:64161
NM_213126 NM_213126
chr8:49287248-49287189
zgc:64161
AGCCTGAATGTTCGAGCGGGCACTGATATTTTGTTTTAAATAACTCCACATTTTAAAAAG
A_15_P100011
FALSE
zgc:153465; zgc:92842
NM_001002497 NM_001002497
chr3:33317944-33317885
hypothetical protein LOC436770; hypothetical protein LOC767786
AAACTGTACCATTTCTTCAACACTAAACATTTTCTGTATGCAAAGCCAGATTACAGATGG
A_15_P100012
FALSE
glmna
NM_001007415 NM_001007415
chr2:7508490-7508549
glomulin, FKBP associated protein a
CTGTGAGGGAAATGTTTCGGCAGTGCTCTTCTCTGATTTTCCTACGTTAAATGATCCCTT
A_15_P100014
FALSE
si:busm1-132m23.3
NM_001030106 NM_001030106
chr7:33620000-33619986
hypothetical protein LOC556909
CACTTCTGCAAAAGAGCTTCAGTGACACGGCAATGGAGGAGGCAAGGGTTGAATAATAAT
A_15_P100015
FALSE
trappc4; slc37a4
NM_200764 NM_200764
chr15:10366955-10367014
trafficking protein particle complex 4; solute carrier family 37 (glucose-6-phosphate transporter), member 4
CTGTTACCAGAAAATGAAAAGTCTATACCTTGGATCTGTAGTTTGGGTCCAAAATGTGCT
A_15_P100016
FALSE
CK362685 CK362685
chr17:13625768-13625827
none
AAAGCGTATTGTAGTGGACTAGATTCAGATGTTAGTAGATGTGGTTAGTAGATGTTGTGT
A_15_P100017
FALSE
a3qk38_danre
ENSDART00000083665
chr5:38534560-38534501
Novel protein similar to human WD repeat domain 66 (WDR66)
GCTATGCTGAAACCAGAAATTATGTGACAGACATCGATCTGGAGGAGTTCATTAGGCTGT
ENSDART00000083665
A_15_P100018
FALSE
TC345908
unmapped
none
CCTTTGAACTGACTGGTTAATAATATGATCCTGTCTTTATAGTGTCCTTGCACCAGACAC
TC345908
A_15_P100019
FALSE
np_001075217.1
NM_001081748 NM_001081748
chr2:25939567-25939756
hypothetical protein LOC558806
AAAGCTCTGTTTGATTATTTAAACACAGATTTGAAGGAAGATAACTATCACCCGAGTGAC
A_15_P100022
FALSE
TC327476
chr1:45262694-45262753
none
ACCAAAGCTTTTCTTGAGGTGGACAAAGCATTAGCGAGGCATCTTCACTTCAGTGCAGAT
TC327476
A_15_P100023
FALSE
chpt1
NM_212624 NM_212624
chr4:18448752-18448693
choline phosphotransferase 1
TGTTGATCTTGTGTGCCTGTTTTATGATGCACTAACTCTGAATGCTTAGAATCATCTCCT
A_15_P100025
FALSE
cct6a
NM_201290 NM_201290
chr21:33577539-33577480
chaperonin containing TCP1, subunit 6A (zeta 1)
CCTTCCAGTCAATTGGTTTATTTAAGAAGTTGTGTTACAGATGCACTGAATCGCAATACA
A_15_P100028
FALSE
actr2b
NM_001017542 NM_001017542
chr13:4776649-4777032
ARP2 actin-related protein 2b homolog (yeast)
ACCAAGAACCGCGAGAAGATCATAGAGGTCATGTTTGAGACATACCAGTTTACAGGCGTT
A_15_P100030
FALSE
cblb
XR_029969 XR_029969
chr10:23329359-23329530
Cas-Br-M (murine) ecotropic retroviral transforming sequence b
AGCGCTCAGGTCAGCTCCACAGAGGAGCTGAAATACAATTTTTCGTATTTTGGAAGTGTC
A_15_P100032
FALSE
tbc1d16
NM_001006076 NM_001006076
chr3:15384471-15384530
TBC1 domain family, member 16
TGTAGAATTTCAATACCTAATGGGACACCGTTAGCAAGTGTGAGAATGTAAATACAGACT
43603 6879 Kbytes .Supplementary file Size Download File type/resource GPL16501_023490_D_GEO_20090327.txt.gz
2.7 Mb
(ftp) (http) TXT
Less...
More...