GEO help: Mouse over screen elements for information.
Status
Public on Mar 25, 2014
Title
Agilent-037880/INRA Sus scrofa 60K v1 (enriched with immune system muscle and adipose tissue genes) [Feature numbers]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Sus scrofa Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.genomics.agilent.com/GenericB.aspx?PageType=Custom&SubPageType=Custom&PageID=2011
Description
Arrays of this design have barcodes that begin with 16037880 or 2537880
Contributor(s)
Vincent A , Jegou M , Moreews F , Louveau I , Damon M , Rogel-Gaillard C , Liaubet L , Le Huerou-Luron I Submission date
Jan 18, 2013
Last update date
Mar 16, 2015
Contact name
Isabelle Luron
E-mail(s)
isabelle.luron@rennes.inra.fr Organization name
National Institute for Agronomical Research (INRA)
Department
Human Nutrition Division
Lab
Nutrition & Digestive, Nervous and Behaviourial Adaptation
Street address
Domaine de la Prise
City
Saint-Gilles
State/province
Rennes
ZIP/Postal code
35590
Country
France
Samples (419)
GSM1358585 , GSM1358586 , GSM1358587 , GSM1358588 , GSM1358589 , GSM1358590
GSM1358591 ,
GSM1358592 ,
GSM1358593 ,
GSM1358594 ,
GSM1358595 ,
GSM1358596 ,
GSM1358597 ,
GSM1358598 ,
GSM1358599 ,
GSM1358600 ,
GSM1358601 ,
GSM1358602 ,
GSM1358603 ,
GSM1358604 ,
GSM1358605 ,
GSM1358606 ,
GSM1358607 ,
GSM1358608 ,
GSM1358609 ,
GSM1358610 ,
GSM1358611 ,
GSM1358612 ,
GSM1358613 ,
GSM1358614 ,
GSM1358615 ,
GSM1358616 ,
GSM1358617 ,
GSM1358618 ,
GSM1358619 ,
GSM1358620 ,
GSM1358621 ,
GSM1358622 ,
GSM1358623 ,
GSM1358624 ,
GSM1358625 ,
GSM1358626 ,
GSM1358627 ,
GSM1358628 ,
GSM1358629 ,
GSM1358630 ,
GSM1358631 ,
GSM1358632 ,
GSM1358633 ,
GSM1358634 ,
GSM1358635 ,
GSM1358636 ,
GSM1358637 ,
GSM1358638 ,
GSM1358639 ,
GSM1358640 ,
GSM1358641 ,
GSM1358642 ,
GSM1358643 ,
GSM1358644 ,
GSM1358645 ,
GSM1820177 ,
GSM1820178 ,
GSM1820179 ,
GSM1820180 ,
GSM1820181 ,
GSM1820182 ,
GSM1820183 ,
GSM1820184 ,
GSM1820185 ,
GSM1820186 ,
GSM1820187 ,
GSM1820188 ,
GSM1820189 ,
GSM1820190 ,
GSM1820191 ,
GSM1820192 ,
GSM1820193 ,
GSM1820194 ,
GSM1820195 ,
GSM1820196 ,
GSM1820197 ,
GSM1820198 ,
GSM1820199 ,
GSM1820200 ,
GSM1820201 ,
GSM1820202 ,
GSM1820203 ,
GSM1820204 ,
GSM1820205 ,
GSM1820206 ,
GSM1820207 ,
GSM1820208 ,
GSM1820209 ,
GSM1820210 ,
GSM1820211 ,
GSM1820212 ,
GSM1820213 ,
GSM1820214 ,
GSM1820215 ,
GSM1820216 ,
GSM1820217 ,
GSM1820218 ,
GSM1820219 ,
GSM1820220 ,
GSM1820221 ,
GSM1820222 ,
GSM1820223 ,
GSM1820224 ,
GSM1820225 ,
GSM1820226 ,
GSM1820227 ,
GSM1820228 ,
GSM1820229 ,
GSM1820230 ,
GSM1820231 ,
GSM1820232 ,
GSM1820233 ,
GSM1820234 ,
GSM1820235 ,
GSM1820236 ,
GSM1820237 ,
GSM1820238 ,
GSM1820239 ,
GSM1820240 ,
GSM1820241 ,
GSM1820242 ,
GSM1820243 ,
GSM1820244 ,
GSM1820245 ,
GSM1820246 ,
GSM1820247 ,
GSM1820248 ,
GSM1820249 ,
GSM1820250 ,
GSM1820251 ,
GSM1820252 ,
GSM1820253 ,
GSM1820254 ,
GSM1820255 ,
GSM1820256 ,
GSM1820257 ,
GSM1820258 ,
GSM1820259 ,
GSM1820260 ,
GSM1820261 ,
GSM1820262 ,
GSM1820263 ,
GSM1820264 ,
GSM1820265 ,
GSM1820266 ,
GSM1820267 ,
GSM1820268 ,
GSM1820269 ,
GSM1820270 ,
GSM1820271 ,
GSM1820272 ,
GSM1820273 ,
GSM1820274 ,
GSM1820275 ,
GSM1820276 ,
GSM1820277 ,
GSM1820278 ,
GSM1820279 ,
GSM1820280 ,
GSM1820281 ,
GSM1820282 ,
GSM1820283 ,
GSM1820284 ,
GSM1820285 ,
GSM1820286 ,
GSM1820287 ,
GSM1820288 ,
GSM1820289 ,
GSM1820290 ,
GSM1820291 ,
GSM1820292 ,
GSM1820293 ,
GSM1820294 ,
GSM1820295 ,
GSM1820296 ,
GSM1820297 ,
GSM1820298 ,
GSM1820299 ,
GSM1820300 ,
GSM1820301 ,
GSM1820302 ,
GSM1820303 ,
GSM1820304 ,
GSM1820305 ,
GSM1820306 ,
GSM1820307 ,
GSM1820308 ,
GSM1820309 ,
GSM1820310 ,
GSM1820311 ,
GSM1820312 ,
GSM1820313 ,
GSM1820314 ,
GSM1820315 ,
GSM1820316 ,
GSM1820317 ,
GSM1820318 ,
GSM1820319 ,
GSM1820320 ,
GSM2227080 ,
GSM2227081 ,
GSM2227082 ,
GSM2227083 ,
GSM2227084 ,
GSM2227085 ,
GSM2227086 ,
GSM2227087 ,
GSM2227088 ,
GSM2227089 ,
GSM2227090 ,
GSM2227091 ,
GSM2227092 ,
GSM2227093 ,
GSM2227094 ,
GSM2227095 ,
GSM2227096 ,
GSM2227097 ,
GSM2227098 ,
GSM2227099 ,
GSM2227100 ,
GSM2227101 ,
GSM2227102 ,
GSM2227103 ,
GSM2227104 ,
GSM2227105 ,
GSM2227106 ,
GSM2227107 ,
GSM2227108 ,
GSM2227109 ,
GSM2227110 ,
GSM2227111 ,
GSM2227112 ,
GSM2227113 ,
GSM2227114 ,
GSM2227115 ,
GSM2227116 ,
GSM2227117 ,
GSM2227118 ,
GSM2227119 ,
GSM2227120 ,
GSM2227121 ,
GSM2227122 ,
GSM2227123 ,
GSM2227124 ,
GSM2227125 ,
GSM2227126 ,
GSM2227127 ,
GSM2227128 ,
GSM2227129 ,
GSM2227130 ,
GSM2227131 ,
GSM2227132 ,
GSM2227133 ,
GSM2227134 ,
GSM2227135 ,
GSM2227136 ,
GSM2227137 ,
GSM2227138 ,
GSM2227139 ,
GSM2227140 ,
GSM2227141 ,
GSM2227142 ,
GSM2227143 ,
GSM2227144 ,
GSM2227145 ,
GSM2227146 ,
GSM2227147 ,
GSM2227148 ,
GSM2227149 ,
GSM2227150 ,
GSM2227151 ,
GSM2227152 ,
GSM2227153 ,
GSM2227154 ,
GSM2227155 ,
GSM2227156 ,
GSM2227157 ,
GSM2227158 ,
GSM2227159 ,
GSM2227160 ,
GSM2227161 ,
GSM2227162 ,
GSM2227163 ,
GSM2227164 ,
GSM2227165 ,
GSM2227166 ,
GSM2227167 ,
GSM2227168 ,
GSM2227169 ,
GSM2227170 ,
GSM2227171 ,
GSM2227172 ,
GSM2227173 ,
GSM2227174 ,
GSM2227175 ,
GSM2868246 ,
GSM2868247 ,
GSM2868248 ,
GSM2868249 ,
GSM2868250 ,
GSM2868251 ,
GSM2868252 ,
GSM2868253 ,
GSM2868254 ,
GSM2868255 ,
GSM2868256 ,
GSM2868257 ,
GSM2868258 ,
GSM2868259 ,
GSM2868260 ,
GSM2868261 ,
GSM2868262 ,
GSM2868263 ,
GSM2868264 ,
GSM2868265 ,
GSM2868266 ,
GSM2868267 ,
GSM2868268 ,
GSM2868269 ,
GSM2868270 ,
GSM2868271 ,
GSM2868272 ,
GSM2868273 ,
GSM2868274 ,
GSM2868275 ,
GSM2868276 ,
GSM2868277 ,
GSM2868278 ,
GSM2868279 ,
GSM2868280 ,
GSM2868281 ,
GSM2868282 ,
GSM2868283 ,
GSM2868284 ,
GSM2868285 ,
GSM2868286 ,
GSM2868287 ,
GSM2868288 ,
GSM2868289 ,
GSM2868290 ,
GSM2868291 ,
GSM2868292 ,
GSM2868293 ,
GSM2868294 ,
GSM2868295 ,
GSM2868296 ,
GSM2868297 ,
GSM2868298 ,
GSM2868299 ,
GSM2868300 ,
GSM2868301 ,
GSM2868302 ,
GSM2868303 ,
GSM2868304 ,
GSM2868305 ,
GSM2868306 ,
GSM2868307 ,
GSM2868308 ,
GSM2868309 ,
GSM2868310 ,
GSM2868311 ,
GSM2868312 ,
GSM2868313 ,
GSM2868314 ,
GSM2868315 ,
GSM2868316 ,
GSM2868317 ,
GSM2868318 ,
GSM2868319 ,
GSM2868320 ,
GSM2868321 ,
GSM2868322 ,
GSM2868323 ,
GSM2868324 ,
GSM2868325 ,
GSM2868326 ,
GSM2868327 ,
GSM2868328 ,
GSM2868329 ,
GSM2868330 ,
GSM2868331 ,
GSM2868332 ,
GSM2868333 ,
GSM2868334 ,
GSM2868335 ,
GSM2868336 ,
GSM2868337 ,
GSM2868338 ,
GSM2868339 ,
GSM2868340 ,
GSM2868341 ,
GSM2868342 ,
GSM2868343 ,
GSM2868344 ,
GSM2868345 ,
GSM2868346 ,
GSM2868347 ,
GSM2868348 ,
GSM2868349 ,
GSM2868350 ,
GSM2868351 ,
GSM2868352 ,
GSM2868353 ,
GSM2868354 ,
GSM2868355 ,
GSM2868356 ,
GSM2868357 ,
GSM2868358 ,
GSM2868359 ,
GSM2868360 ,
GSM2868361 ,
GSM2868362 ,
GSM2868363 Series (9)
GSE56301 Muscle Transcriptomic Investigation of Late Fetal Development Identifies Candidate Genes for Key Roles in Piglet Maturity
GSE70836 Effects of selection on residual feed intake and diet on gene expression in pig subcutaneous adipose tissue
GSE70837 Effects of selection on residual feed intake and diet on gene expression in pig perirenal adipose tissue
GSE70838 Effect of selection on residual feed intake and diet on gene expression in whole blood of pig
GSE70839 Effects of selection on residual feed intake and diet on gene expression in pig tissues
GSE84091 Effects of selection on residual feed intake and diet on gene expression in pig liver
GSE84092 Effects of selection on residual feed intake and diet on gene expression in pig skeletal muscle
GSE84093 Effects of selection on residual feed intake and diet on gene expression
GSE107487 Time course study of the response to LPS targeting the pig immune response gene networks
Relations Alternative to
GPL19893
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
NAME NAME
SPOT_ID Spot identifier
CONTROL_TYPE Control type
SEQUENCE Sequence
ANNOTATION DESCRIPTION GENE_NAME Gene Name
Data table ID COL ROW NAME SPOT_ID CONTROL_TYPE SEQUENCE ANNOTATION DESCRIPTION GENE_NAME 1
192
328
GE_BrightCorner
GE_BrightCorner
pos
null
null
null
2
192
326
DarkCorner
DarkCorner
pos
null
null
null
3
192
324
DarkCorner
DarkCorner
pos
null
null
null
4
192
322
A_72_P609414
A_72_P609414
FALSE
ATGTTAAACTAGCATACCTGCCTTTATTGTGTTTGTCAGTAGCCGAATTAGAAAGGCCTT
A6M930
eukaryotic translation initiation factor 4A2
EIF4A2
5
192
320
A_72_P025106
A_72_P025106
FALSE
TTCGATCATCTTCAGACACCTCTTTTCCAAATAAGGTCACATGCACAGGTACATTTATAT
TC557131
No Description
#N/D
6
192
318
gi|54501177|gb|CJ009409.1|CJ009409
gi|54501177|gb|CJ009409.1|CJ009409
FALSE
GACACTGTGGCCTCTCAGTGAACCATCAGGAATAAACAAAGAACTGAATGCCTCAAAAAA
NM_003650
cystatin F (leukocystatin)
CST7
7
192
316
A_72_P223307
A_72_P223307
FALSE
TTTCTGGGTGTCGCGCTCAGCACTGCTACTGAGATTCAAAACCGAAACAAATTTCTCTAA
P38160
tubulin tyrosine ligase
TTL
8
192
314
O12107
O12107
FALSE
GCACACTGCTTTAGAGTGTCATAAATGCCCTCAATGCTATCATCTTTCATACTCAGAAGG
P23921
ribonucleotide reductase M1
RRM1
9
192
312
NA
NA
ignore
null
null
null
10
192
310
A_72_P415348
A_72_P415348
FALSE
TCAGTTAAATTAGACTCCCTGTGTCTATTAAAGGATAGCACCAAGGTTAATATAACTGAG
CK462325
"933116 MARC 4PIG cDNA 3', mRNA sequence [CK462325]"
#N/D
11
192
308
A_72_P120371
A_72_P120371
FALSE
GTTTCAACCACGATGTATTACTGTGTAAAGACCCTAAAGTGTGAATGTTCTGCAAAAATT
Q52LA3
lin-52 homolog (C. elegans)
LIN52
12
192
306
A_72_P292654
A_72_P292654
FALSE
ATTCACAATTGAGGATTTCCACAACACGTTCATGGACCTAATCGAGCAGGTGGAGAAGCA
Q96FW1
"OTU domain, ubiquitin aldehyde binding 1"
OTUB1
13
192
304
A_72_P402498
A_72_P402498
FALSE
TCCAAAACCCACTGATGAACTTCTTTGGGAGGCGGGACTTGGATCCACAATAGTTTCTTT
TC604496
No Description
#N/D
14
192
302
A_72_P371993
A_72_P371993
FALSE
TAGGAAATTCTCAAAGTCATTCTTAACTTCGTAAGTTTTCTTGGTAACCTTTGCTTGGAG
NM_152647
chromosome 15 open reading frame 33
C15orf33
15
192
300
A_72_P183841
A_72_P183841
FALSE
CTCTGCTGGAAAGCAAGATCATACTACCCACTTGTCTTAAATACTTTTTTCCGTCAAAAA
TC579771
No Description
#N/D
16
192
298
O9872
O9872
FALSE
CAGGCAGCAGGCAGGGACTGTGGGTTGGTGTGTGCATTAAAGTGCTCTGGGGAAGAAAAA
NM_032355
MON1 homolog A (yeast)
MON1A
17
192
296
A_72_P288824
A_72_P288824
FALSE
TGTTCCTTTTCCTGGAATGCTTTAGACTCCAAAGTTCTGACTCGTTCGATTTCCTCAGTC
NM_020242
kinesin family member 15
KIF15
18
192
294
A_72_P502529
A_72_P502529
FALSE
GAGCTGTGAGATTGTGGGTGACTTCTTTGTTTTAGTTCTACTCATCTGTCTATTTTTTCC
XM_001924869
similar to Transcription elongation factor A protein-like 4 (TCEA-like protein 4) (Transcription elongation factor S-II protein-like 4)
TCEAL4
19
192
292
A_72_P106136
A_72_P106136
FALSE
ATTGTACCACTGGAGAAGGTGACTATCAGTTAGTACAGCATGAAGTCTTGTGCTCCATGA
Q9H422
homeodomain interacting protein kinase 3
HIPK3
20
192
290
A_72_P199657
A_72_P199657
FALSE
TTCCCTTTCAGTAATGAATGATGTGACCAACCAAGGAGAATTTTTTGTTCTGTTACTAAG
CK449926
"893531 MARC 4PIG cDNA 5', mRNA sequence [CK449926]"
#N/D
62976 9814 Kbytes .Supplementary data files not provided
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