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Platform GPL16560

Query DataSets for GPL16560

Status

Public on Apr 01, 2014

Title

Exiqon LNA probes version 10 microRNA array

Technology type

spotted oligonucleotide

Distribution

non-commercial

Organisms

Homo sapiens; Mus musculus; Rattus norvegicus

Manufacturer

Center for Biomics, Erasmus MC, CA Rotterdam

Manufacture protocol

The LNA-based capture probeset (Exiqon version 10,) was spotted on Nexterion E slides using a Virtek Chipwriter Pro

Description

Exiqon LNA probes version 10
In house printed microRNA Custom Exiqon spotted locked nucleic acid (LNA) probes microarray

Submission date

Jan 29, 2013

Last update date

Apr 01, 2014

Contact name

Kasper Derks

E-mail(s)

kasper.derks@mumc.nl

Organization name

Maastricht University Medical Center

Department

Clinical Genetics

Street address

P. Debyelaan 25

City

Maastricht

State/province

Limburg

ZIP/Postal code

6229 HX

Country

Netherlands

Samples (68)

More...

GSM1072093, GSM1072094, GSM1072095, GSM1072096, GSM1072097, GSM1072098

Series (1)

GSE43847

MicroRNA and mRNA biomarkers for short-term in vivo genotoxic and non-genotoxic carcinogen classification

Data table header descriptions
ID
Gene.ID	ID of the gene
Annotation.1	Name of the human reference sequence
miRNA_ID	miBase identifier; Annotation.2; Name of the mouse reference sequence
Annotation.3	Name of the rat reference sequence

Data table
ID	Gene.ID	Annotation.1	miRNA_ID	Annotation.3
EQ_42463	EQ_42463	-	mmu-let-7g	-
EQ_09938	EQ_09938	-	mmu-let-7i	rno-let-7i
EQ_42573	EQ_42573	hsa-miR-1	mmu-miR-1	-
EQ_17280	EQ_17280	hsa-miR-15b	mmu-miR-15b	rno-miR-15b
EQ_11027	EQ_11027	hsa-miR-23b	mmu-miR-23b	rno-miR-23b
EQ_42823	EQ_42823	hsa-miR-27b-3p	mmu-miR-27b-3p	-
EQ_17810	EQ_17810	hsa-miR-29b-1-3p	mmu-miR-29b-3p	-
EQ_11048	EQ_11048	hsa-miR-30a	mmu-miR-30a	rno-miR-30a
EQ_19595	EQ_19595	hsa-miR-30a-3p	mmu-miR-30a-3p	rno-miR-30a-3p
EQ_17565	EQ_17565	hsa-miR-30b	mmu-miR-30b	rno-miR-30b-5p
EQ_42708	EQ_42708	hsa-miR-99a	mmu-miR-99a	rno-miR-99a
EQ_11184	EQ_11184	hsa-miR-99b	mmu-miR-99b	rno-miR-99b
EQ_17935	EQ_17935	hsa-miR-101-3p	mmu-miR-101a-3p	rno-miR-101a-3p
EQ_42898	EQ_42898	hsa-miR-124-3p	mmu-miR-124-3p	rno-miR-124-3p
EQ_10928	EQ_10928	hsa-miR-125a-5p	mmu-miR-125a-5p	rno-miR-125a-5p
EQ_30787	EQ_30787	hsa-miR-125b	mmu-miR-125b-5p	rno-miR-125b-5p
EQ_33596	EQ_33596	hsa-miR-126-3p	mmu-miR-126-5p	rno-miR-126-3p
NotDefined_mmu-miR-126-3p	NotDefined	hsa-miR-126	mmu-miR-126-3p	rno-miR-126
EQ_42692	EQ_42692	hsa-miR-127-5p	mmu-miR-127-3p	-
EQ_33902	EQ_33902	hsa-miR-128	mmu-miR-128	rno-miR-128

Total number of rows: 557

Table truncated, full table size 26 Kbytes.

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML

Supplementary data files not provided