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Status
Public on Mar 01, 2013
Title
Agilent Human gut metagenome array
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
human gut metagenome
Manufacturer
Agilent
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Human gut microbiota Agilent-030618 and Agilent-040558 design IDs. Human Gut chip "HuGChip": A phylogenetic microarray targeting 66 families described in the human gut microbiota.
Submission date
Feb 28, 2013
Last update date
Mar 01, 2013
Contact name
Nicolas Parisot
Organization name
EA 4678 CIDAM
Street address
28 place Henri Dunant
City
Clermont-Ferrand
ZIP/Postal code
63001
Country
France
Samples (49)
GSM1090078 , GSM1090079 , GSM1090080 , GSM1090081 , GSM1132373 , GSM1132374
GSM1132375 ,
GSM1132376 ,
GSM1132377 ,
GSM1132378 ,
GSM1132379 ,
GSM1132380 ,
GSM1132381 ,
GSM1132382 ,
GSM1132383 ,
GSM1132384 ,
GSM1132385 ,
GSM1132386 ,
GSM1132387 ,
GSM1132388 ,
GSM1132389 ,
GSM1132390 ,
GSM1132391 ,
GSM1132392 ,
GSM1132393 ,
GSM1132394 ,
GSM1132395 ,
GSM1132396 ,
GSM1132397 ,
GSM1133793 ,
GSM1133794 ,
GSM1133795 ,
GSM1133796 ,
GSM1133797 ,
GSM2049290 ,
GSM2049291 ,
GSM2049292 ,
GSM2049293 ,
GSM2049294 ,
GSM2049295 ,
GSM2049296 ,
GSM2049297 ,
GSM2049298 ,
GSM2049299 ,
GSM2049300 ,
GSM2049301 ,
GSM2049302 ,
GSM2049303 ,
GSM2049304
Series (4)
GSE44752
The human Gut Chip “HuGChip”, an explorative phylogenetic microarray for determining gut microbiome diversity at Family level
GSE46557
Interactions of wheat aleurine and plant omega-3 fatty acids on the rat gut microbiota
GSE46677
Three-stage continuous culture system with a self-generated anaerobia to study the regionalized metabolism of the human gut microbiota
GSE77327
Human gut microbiota preservation for functional studies: in-vitro comparison of common cryoprotective agents
Data table header descriptions
ID
FAMILY
Bacterial familiy targeted
GB_LIST
GenBank accession number(s) of the sequence(s) targeted
Data table
ID
FAMILY
GB_LIST
b6939_1_1
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_10
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_11
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_12
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_13
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_14
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_15
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_16
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_17
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_18
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_19
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_2
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_20
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_3
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_4
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_5
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_6
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_7
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_8
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
b6939_1_9
Actinomycetaceae
AY919956 , AY978941 , AY979340 , M29552 , M33911
Total number of rows: 4441 Table truncated, full table size 1526 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL16731_030618_D_GEO_20101009.txt.gz
124.1 Kb
(ftp) (http)
TXT
GPL16731_040558_D_GEO_20120427.txt.gz
124.7 Kb
(ftp) (http)
TXT