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Status
Public on Apr 11, 2013
Title
NimbleGen Mouse lncRNA array [110815_MM9_AR_exp]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mus musculus
Manufacturer
NimbleGen
Manufacture protocol
High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/
Description
lncRNA Array designed based on known and novel lncRNAs assembled from RNA-seq reads from adult neurogenic brain regions DESIGN_ID = 557241 Design Name: 110815_MM9_AR_exp For the platform ID column, the identifiers from the 'SEQ_ID' were appended with those in the 'GENE_EXPR_OPTIONPROBE_ID' column to yield unique identifiers, which can be used to map back to the .pair files.
Submission date
Mar 04, 2013
Last update date
Jan 01, 2019
Contact name
Abhinav Nellore
E-mail(s)
abhinav.nellore@ucsf.edu
Phone
4439101925
Organization name
UCSF
Street address
513 Parnassus Avenue
City
San Francisco
State/province
CA
ZIP/Postal code
94143-0794
Country
USA
Samples (12)
GSM1100722 , GSM1100723 , GSM1100724 , GSM1100725 , GSM1100726 , GSM1100727
Series (2)
GSE45281
Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo [lncRNA Array]
GSE45282
Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo
Data table header descriptions
ID
SEQ_ID
GENE_EXPR_OPTION
GB_ACC
GenBank Accession number
CHROMOSOME
RANGE_GB
RANGE_START
RANGE_END
RANGE_STRAND
SPOT_ID
Data table
ID
SEQ_ID
GENE_EXPR_OPTION
GB_ACC
CHROMOSOME
RANGE_GB
RANGE_START
RANGE_END
RANGE_STRAND
SPOT_ID
AK005028_CONTROL_SEQS
AK005028
CONTROL_SEQS
AK005028
AK010953_CONTROL_SEQS
AK010953
CONTROL_SEQS
AK010953
AK039117_CONTROL_SEQS
AK039117
CONTROL_SEQS
AK039117
AK128971_CONTROL_SEQS
AK128971
CONTROL_SEQS
AK128971
AK129421_CONTROL_SEQS
AK129421
CONTROL_SEQS
AK129421
AK140151_CONTROL_SEQS
AK140151
CONTROL_SEQS
AK140151
AK143943_CONTROL_SEQS
AK143943
CONTROL_SEQS
AK143943
AY971958_CONTROL_SEQS
AY971958
CONTROL_SEQS
AY971958
BC001994_CONTROL_SEQS
BC001994
CONTROL_SEQS
BC001994
BC003772_CONTROL_SEQS
BC003772
CONTROL_SEQS
BC003772
BC003833_CONTROL_SEQS
BC003833
CONTROL_SEQS
BC003833
BC007135_CONTROL_SEQS
BC007135
CONTROL_SEQS
BC007135
BC007466_CONTROL_SEQS
BC007466
CONTROL_SEQS
BC007466
BC011310_CONTROL_SEQS
BC011310
CONTROL_SEQS
BC011310
BC012966_CONTROL_SEQS
BC012966
CONTROL_SEQS
BC012966
BC016421_CONTROL_SEQS
BC016421
CONTROL_SEQS
BC016421
BC023729_CONTROL_SEQS
BC023729
CONTROL_SEQS
BC023729
BC023796_CONTROL_SEQS
BC023796
CONTROL_SEQS
BC023796
BC025073_CONTROL_SEQS
BC025073
CONTROL_SEQS
BC025073
BC028816_CONTROL_SEQS
BC028816
CONTROL_SEQS
BC028816
Total number of rows: 17664 Table truncated, full table size 2724 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL16745_110815_MM9_AR_exp.ndf.gz
9.4 Mb
(ftp) (http)
NDF
GPL16745_110815_MM9_AR_exp.ngd.gz
104.0 Kb
(ftp) (http)
NGD