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| Status |
Public on Apr 24, 2013 |
| Title |
FDMC Populus euphratica cDNA microarray slide |
| Technology type |
spotted oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Populus euphratica |
| Manufacturer |
Finnish DNA Microarray Centre |
| Manufacture protocol |
http://www.schott.com/nexterion/english/download/protocol_hisens_e_dna_2_0.pdf
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| Description |
The creation of P. euphratica EST collection is described in Brosché et al. (Genome Biol. 6 (2005) R101). The PCR-amplified fragments originated from EST were spotted on Schott Nexterion E type epoxy-coated slides. The array consists of 3 replicates (4 x 2 arrays per replicate), spacing between replicates spots 8464. The grid of spots is 190 um x 190 um, and one subarray consists of 46 x 23 spots. The grid between subarrays is 9 mm x 4.5 mm.
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| Submission date |
Apr 23, 2013 |
| Last update date |
Apr 24, 2013 |
| Contact name |
Suvi Tuulia Sutela |
| E-mail(s) |
suvi.sutela@oulu.fi
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| Organization name |
University of Oulu
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| Department |
Biology
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| Street address |
P.O. Box 3000
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| City |
Oulu |
| ZIP/Postal code |
90014 |
| Country |
Finland |
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| Samples (18)
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GSM1128676, GSM1128677, GSM1128678, GSM1128679, GSM1128680, GSM1128681
GSM1128682, GSM1128683, GSM1128684, GSM1128685, GSM1128686, GSM1128687, GSM1128688, GSM1128689, GSM1128690, GSM1128691, GSM1128692, GSM1128693
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| Series (1) |
| GSE46331 |
24-hour herbivory exposure of VHb-expressing Populus tremula x Populus tremuloides |
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| Data table header descriptions |
| ID |
|
| Block |
Block number (1-24) |
| Row |
Row number (1-23) |
| Column |
Column number (1-46) |
| GB_ACC |
GenBank accession |
| Name |
Spotting plate |
| cDNA_clone |
Populus euphratica cDNA clone |
| SPOT_ID |
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| Data table |
| ID |
Block |
Row |
Column |
GB_ACC |
Name |
cDNA_clone |
SPOT_ID |
| 1 |
1 |
1 |
1 |
AJ767390 |
*R040_1A1* |
P0000100005E12 |
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| 2 |
1 |
1 |
2 |
AJ767659 |
*R040_1A2* |
P0000100008G10 |
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| 3 |
1 |
1 |
3 |
AJ768206 |
*R040_1A5* |
P0000100015C05 |
|
| 4 |
1 |
1 |
4 |
AJ768319 |
*R040_1A6* |
P0000100016E08 |
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| 5 |
1 |
1 |
5 |
AJ768987 |
*R040_1A9* |
P0000100024A11 |
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| 6 |
1 |
1 |
6 |
AJ769278 |
*R040_1A10* |
P0000100028B04 |
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| 7 |
1 |
1 |
7 |
AJ776752 |
*R040_1A13* |
P0000400018A01 |
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| 8 |
1 |
1 |
8 |
AJ777037 |
*R040_1A14* |
P0000400022B08 |
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| 9 |
1 |
1 |
9 |
AJ777674 |
*R040_1A17* |
P0000400033D12 |
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| 10 |
1 |
1 |
10 |
AJ777938 |
*R040_1A18* |
P0000400037B10 |
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| 11 |
1 |
1 |
11 |
AJ778716 |
*R040_1A21* |
P0000600005B02 |
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| 12 |
1 |
1 |
12 |
AJ778967 |
*R040_1A22* |
P0000600009B10 |
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| 13 |
1 |
1 |
13 |
AJ767519 |
*R040_1E1* |
P0000100007B05 |
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| 14 |
1 |
1 |
14 |
AJ767703 |
*R040_1E2* |
P0000100009C10 |
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| 15 |
1 |
1 |
15 |
AJ768251 |
*R040_1E5* |
P0000100015G07 |
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| 16 |
1 |
1 |
16 |
AJ768407 |
*R040_1E6* |
P0000100017E05 |
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| 17 |
1 |
1 |
17 |
AJ769180 |
*R040_1E9* |
P0000100026B11 |
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| 18 |
1 |
1 |
18 |
AJ769362 |
*R040_1E10* |
P0000100030B10 |
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| 19 |
1 |
1 |
19 |
AJ776901 |
*R040_1E13* |
P0000400020B02 |
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| 20 |
1 |
1 |
20 |
AJ777128 |
*R040_1E14* |
P0000400023D10 |
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Total number of rows: 25392
Table truncated, full table size 1269 Kbytes.
| Supplementary data files not provided |
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