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Status
Public on Jul 01, 2005
Title
Human 3.8k cDNA
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Homo sapiens
Description
Spotted cDNA Orestes clones and PCR amplified fragments on glass.
Web link
http://www.lbc.ludwig.org.br/mama_cs_2_3/map38k.txt Contributor(s)
Fiorini A , Fiorini A Citation(s)
16243817 Submission date
Dec 02, 2004
Last update date
Jun 12, 2013
Contact name
Renato David Puga
Organization name
Universidade de São Paulo
Department
Instituto de Psiquiatria
Lab
Laboratório de Genética
Street address
Dr Ovidio Pires de Campos,785
City
São Paulo
State/province
São Paulo
ZIP/Postal code
05403-010
Country
Brazil
Samples (118)
GSM37213 , GSM37214 , GSM37215 , GSM37216 , GSM37217 , GSM37218
GSM37219 ,
GSM37220 ,
GSM37221 ,
GSM37222 ,
GSM37223 ,
GSM37224 ,
GSM37225 ,
GSM37226 ,
GSM37227 ,
GSM37228 ,
GSM37229 ,
GSM37230 ,
GSM37231 ,
GSM37232 ,
GSM37233 ,
GSM37234 ,
GSM37235 ,
GSM37236 ,
GSM37237 ,
GSM37238 ,
GSM37239 ,
GSM37240 ,
GSM37241 ,
GSM37242 ,
GSM37243 ,
GSM37244 ,
GSM37245 ,
GSM37246 ,
GSM37247 ,
GSM37248 ,
GSM37249 ,
GSM37250 ,
GSM37251 ,
GSM37252 ,
GSM37253 ,
GSM37254 ,
GSM37255 ,
GSM37256 ,
GSM37257 ,
GSM37258 ,
GSM37259 ,
GSM37260 ,
GSM37261 ,
GSM37262 ,
GSM37263 ,
GSM37264 ,
GSM37265 ,
GSM37266 ,
GSM37267 ,
GSM37268 ,
GSM37269 ,
GSM37270 ,
GSM37271 ,
GSM37272 ,
GSM37273 ,
GSM37274 ,
GSM37275 ,
GSM37276 ,
GSM37277 ,
GSM37278 ,
GSM37279 ,
GSM37280 ,
GSM37281 ,
GSM37282 ,
GSM37283 ,
GSM37284 ,
GSM37285 ,
GSM37286 ,
GSM37287 ,
GSM37288 ,
GSM37289 ,
GSM37290 ,
GSM37291 ,
GSM37292 ,
GSM37293 ,
GSM37294 ,
GSM37295 ,
GSM37296 ,
GSM37297 ,
GSM37298 ,
GSM37299 ,
GSM37300 ,
GSM37301 ,
GSM37302 ,
GSM37303 ,
GSM37304 ,
GSM37305 ,
GSM37306 ,
GSM37307 ,
GSM37308 ,
GSM37309 ,
GSM37310 ,
GSM37311 ,
GSM37312 ,
GSM37313 ,
GSM37314 ,
GSM37315 ,
GSM37316 ,
GSM37317 ,
GSM37318 ,
GSM37319 ,
GSM37320 ,
GSM37321 ,
GSM37322 ,
GSM37323 ,
GSM37324 ,
GSM37325 ,
GSM37326 ,
GSM37327 ,
GSM37328 ,
GSM37329 ,
GSM37330 Series (1)
GSE2048 Breast Cancer: Invasive Ductal Carcinoma
Data table header descriptions ID
gridRow Row within array
gridColumn Column within array
spotRow Row within sub-array
spotColumn Column within sub-array
Name Accession Number of sequence spotted
GB_ACC GenBank accession number of sequence used to design cDNA probe
SPOT_ID
GenName Gene symbol, from UniGene Build 175
UNIGENE UniGene cluster ID, Build 175
Annot
Data table ID gridRow gridColumn spotRow spotColumn Name GB_ACC SPOT_ID GenName UNIGENE Annot 1
1
1
1
1
BLANK
BLANK
2
1
1
1
2
CM0-BN0105-170300-292-H04
BE004304 CYP1B1
154654
Cytochrome P450, family 1, subfamily B, polypeptide 1
3
1
1
1
3
IL0-BT0168-091199-139-E10
AW369828 MYBL1
300592
V-myb myeloblastosis viral oncogene homolog (avian)-like 1
4
1
1
1
4
CM0-BT0793-030600-413-C09
BE695233 ESR1
1657
Estrogen receptor 1
5
1
1
1
5
CM1-HT0877-140900-404-E10
BF088386 TGFB1
1103
Transforming growth factor, beta 1 (Camurati-Engelmann disease)
6
1
1
1
6
CM0-CI0030-051000-584-G12
BF798828 CHGB
2281
Chromogranin B (secretogranin 1)
7
1
1
1
7
IL3-CT0214-100100-050-F05
AW578385 ITGB4
85266
Integrin, beta 4
8
1
1
1
8
CM0-CI0136-311000-655-C12
BF802541 9
1
1
1
9
IL3-CT0219-131299-032-A08
AW752793 10
1
1
1
10
CM0-CI0177-111100-685-H06
BF807611 SDHAL2
478752
Succinate dehydrogenase complex, subunit A, flavoprotein-like 2
11
1
1
1
11
BLANK
BLANK
12
1
1
2
1
IL3-CT0219-280100-062-D01
AW604306 IL8
624
Interleukin 8
13
1
1
2
2
CM0-CS0042-101000-589-D05
BF761841 SLC9A3R1
396783
Solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 1
14
1
1
2
3
MR0-HT0078-131299-007-H11
AW365826 VEGF
73793
Vascular endothelial growth factor
15
1
1
2
4
QV4-FT0004-180500-222-B10
BE768040 16
1
1
2
5
RC2-FN0164-030700-011-F10
BE839687 CYP24A1
89663
Cytochrome P450, family 24, subfamily A, polypeptide 1
17
1
1
2
6
QV4-GN0122-250900-426-H02
BF369905 TUBB
512712
Tubulin, beta polypeptide
18
1
1
2
7
RC2-GN0037-140800-014-F07
BE767732 BCL2
79241
B-cell CLL/lymphoma 2
19
1
1
2
8
QV4-GN0250-281100-608-E09
BG007612 MLH1
433618
MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)
20
1
1
2
9
RC2-NT0109-310500-011-A04
BE766808 ITGA4
145140
Integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
3872 296 Kbytes .Supplementary data files not provided
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