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Status
Public on Dec 31, 2013
Title
Agilent-020586 Daphnia3_1_Of_1 4x44k custom array (Probename version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Daphnia magna
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Arrays of this design have barcodes that begin with 16020586 or 2520586. Orientation: Features are numbered numbered Left-to-Right Top-to-Bottom as scanned by an Agilent scanner (barcode on the left DNA on the back surface scanned through the glass) matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction Probe names.
Submission date
Jun 15, 2013
Last update date
Dec 31, 2013
Contact name
Kenji Toyota
E-mail(s)
kenji514@nibb.ac.jp
Organization name
National Institute for Basic Biology
Street address
5-1 Higashiyama
City
Okazaki
ZIP/Postal code
444-8585
Country
Japan
Samples (54)
GSM1164173 , GSM1164174 , GSM1164175 , GSM1164176 , GSM1164177 , GSM1164178
GSM1164179 ,
GSM1164180 ,
GSM1164181 ,
GSM1164182 ,
GSM1164183 ,
GSM1164184 ,
GSM1164185 ,
GSM1164186 ,
GSM1164187 ,
GSM1164188 ,
GSM1164189 ,
GSM1164190 ,
GSM1164191 ,
GSM1164192 ,
GSM1164193 ,
GSM1164194 ,
GSM1164195 ,
GSM1164196 ,
GSM1164197 ,
GSM1164198 ,
GSM1164199 ,
GSM1164200 ,
GSM1164201 ,
GSM1164202 ,
GSM1296276 ,
GSM1296277 ,
GSM1296278 ,
GSM1296279 ,
GSM1296280 ,
GSM1296281 ,
GSM1296282 ,
GSM1296283 ,
GSM2142348 ,
GSM2142349 ,
GSM2142350 ,
GSM2142351 ,
GSM2142352 ,
GSM2142353 ,
GSM2142354 ,
GSM2142355 ,
GSM2142356 ,
GSM2142357 ,
GSM2142358 ,
GSM2142359 ,
GSM2142360 ,
GSM2142361 ,
GSM2142362 ,
GSM2142363
Series (3)
GSE47990
Molecular impact of juvenile hormone agonists on neonatal Daphnia magna
GSE53570
Detection of juvenile hormone-like function of diofenolan in Daphnia magna using in vivo short-term screening assay, TG211 Annex 7 reproduction test and microarray analysis
GSE81083
Comparative ovarian microarray analysis of juvenile hormone-responsive genes in water flea Daphnia magna
Data table header descriptions
ID
Agilent Probename. NAME.
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
CHROMOSOMAL_LOCATION
Chromosomal Location
DESCRIPTION
Description
GO_ID
GoIDs
SEQUENCE
Sequence
Data table
ID
SPOT_ID
CONTROL_TYPE
CHROMOSOMAL_LOCATION
DESCRIPTION
GO_ID
SEQUENCE
CU1000
CU1000
FALSE
unmapped
Contig610
AGCATCATGAAATGCGATATTGACATCCGTAAGGATCTGTACGCCAACAATGTGCTCTCC
CU10019
CU10019
FALSE
unmapped
N/A
N/A
TGCCAAAAATCGTTTGTTTCGTGGCCTTTTCTGGTTTTCTTTTCTTTAATGGTGATCAGC
CU10056
CU10056
FALSE
unmapped
N/A
N/A
TAGATGTAAGTGCAAGCTCAGCATGACAGCTCAAAGCTGGACCTGCCTCTCCATGCCCGC
CU10077
CU10077
FALSE
unmapped
N/A
N/A
TGAACTGCCGCTGCCTCCTGAATTGGGTTGCGTTGATGACGTATAGTGAGGTGACGGCAG
CU10091
CU10091
FALSE
unmapped
N/A
N/A
CCAACAGGTCGTGGCACAACGTTTACTGCGTCGTCTGCCACCAGGAGATGAGTTTCTTCA
CU10094
CU10094
FALSE
unmapped
N/A
N/A
ATCTGCTGCCGCCTTAGTTAAAGACACTCAAACTCCCATTAAAGATACGCTCACATCTTT
CU10123
CU10123
FALSE
unmapped
N/A
N/A
AAGATTTTGGAGACGGTCGGGGTGTTTGAAGCCGTGAAGCAGCATGGAAAATATGAAACA
CU10133
CU10133
FALSE
unmapped
N/A
N/A
ACGACAGAGTCTGTCCATCTCCCCGTGGCTCAGGTCTCCATACGAGCGGAAGTAAAAAGA
CU10144
CU10144
FALSE
unmapped
N/A
N/A
ATATATGAGTGAACCTTCATGAGCCTCCTGTCTGTCAACAACCGAGATTTCACCCGAGAT
CU10177
CU10177
FALSE
unmapped
N/A
N/A
TTTATGAAGGAAAGTGATTCCGTCGCTGCAGGAAAGTGTTTCCCACCGCATCAATAAACC
CU10183
CU10183
FALSE
unmapped
N/A
N/A
ATCAGCTTTCATGTTCCGTCTGTGTTTTTAACCTCTCTGCTTTCTGTCTGCCTCAAAAAA
CU10193
CU10193
FALSE
unmapped
N/A
N/A
AAGAACATCAAAAATCCGCTTCTTCCTGGTCTCTACTTGGACGCATCGCTTCAATCCGTT
CU10196
CU10196
FALSE
unmapped
N/A
N/A
TTGAAGGATTGGAGCTGCCCCCCTCTCGCTCATCCTCCACCAGTGACTGCAAGTCTCTAT
CU10208
CU10208
FALSE
unmapped
N/A
N/A
TAGCTGTCCTTATAAATGCCTCTCTTATGCACCAGCTCAAGGTGCTTTTCATTTGGGTCC
CU10210
CU10210
FALSE
unmapped
N/A
N/A
TGCTTCCCTGAAAAGCCGACGCCCCCTGGATGACCTCTGAAGTTGTCATAGTTACCACGC
CU10226
CU10226
FALSE
unmapped
N/A
N/A
AGGATTTAAAGGTTTCAGCGGCGCGACCAATGGGAGTGCTCCTGCGTTCAGGGGTTTCTC
CU10244
CU10244
FALSE
unmapped
N/A
N/A
GTTCCCCTTCACAACGAGGAAGATGACAGGATGGTTCCCTGCACTCCCACGCTTCTTCAC
CU1025
CU1025
FALSE
unmapped
N/A
N/A
TGGCATGTGCATCCCCTGCTCTTGCTGCTGTTGTTGTGAGGGCAACTCTGGCATGTGCAT
CU10262
CU10262
FALSE
unmapped
N/A
N/A
TCAAGCAGCGCTTCAGGAAGAACTTCACGGCCCTGCTGGAGGAGGAGAATTTGTCGGAGA
CU10264
CU10264
FALSE
unmapped
N/A
N/A
TTCTTTTCCCCTGTGTGGTCACAGCGCCCCCTGCTGTTTTTTATGCTCTGTCAATAAATA
Total number of rows: 43863 Table truncated, full table size 6119 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL17297_020586_D_GEO_20080612.txt.gz
1.9 Mb
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