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Platform GPL1737 Query DataSets for GPL1737
Status Public on Dec 10, 2004
Title UD 7.4K Metabolic/Somatic Systems
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Gallus gallus
Description Spotted amplified cDNA array on glass.
7680 spots corresponding to 7435 genes from Liver and Adipose tissue.
Web link
Contributor(s) Cogburn LA, Wang X, Carré W
Citation(s) 16554550
Submission date Dec 08, 2004
Last update date Mar 24, 2006
Contact name Larry Albert Cogburn
Phone 302-831-1335
Organization name University of Delaware
Department Animal and Food Sciences
Lab Avian Functional Genomics
Street address 531 South College Ave.
City Newark
State/province DE
ZIP/Postal code 19717
Country USA

Data table header descriptions
GB_ACC GenBank accession number of sequence
BLAST_X First BlastX result
BLAST_N First BlastN result
CAP3_ASSEMBLY Result of CAP3 Assembly
LOCALISATION Localisation of the gene on Chicken Assembly

Data table
1.1.1 pft1c.pk002.a5 AW355537 heat shock protein [Numida meleagris] Chicken 70 kd heat shock protein (HSP), complete cds Contig_13760.1 pft1c/pft1c.pk002.a5 chr5:49641488-49646488 1 1 1
1.1.2 pft1c.pk003.e7 AW355636 Triacylglycerol lipase, pancreatic precursor (Pancreatic lipase) (PL) Canine lipase mRNA, complete cds Contig_13045.1 pft1c/pft1c.pk003.e7 chr6:27898276-27903276 1 1 2
1.1.3 pft1c.pk004.f12 AW355713 putative FK506-binding protein [Gallus gallus] Gallus gallus mRNA for putative FK506-binding protein (FKBP25 gene) Contig_13835.1 pft1c/pft1c.pk004.f12 chr5:55459886-55464886 1 1 3
1.1.4 pgf1n.pk001.f9 BI064446 phosphatidlyinositol 3-kinase (EC 2.7.1.-) 85K chain - mouse No Hits Found Contig_10806.1 pgf1n/pgf1n.pk001.f9 chr28:3311639-3316639 1 1 4
1.1.5 pgf1n.pk001.l2 BI064544 Similar to DHHC1 protein [Homo sapiens] Homo sapiens, Similar to DHHC1 protein, clone MGC:8765 IMAGE:3852521, mRNA, complete cds Contig_23407.1 pgf1n/pgf1n.pk001.l2 chr2:42242283-42247283 1 1 5
1.1.6 pgf1n.pk002.c3 BI064675 fibronectin type 3 and SPRY domain-containing protein [Homo sapiens] Homo sapiens microtubule-associated protein GLFND mRNA, completecds Contig_26312.1 pgf1n/pgf1n.pk002.c3 1 1 6
1.1.7 pft1c.pk002.a9 AW355541 hypothetical protein [Homo sapiens] No Hits Found Contig_10770.1 pft1c/pft1c.pk002.a9 chr5:25026382-25031382 1 1 7
1.1.8 pft1c.pk003.f7 AW355642 No Hits Found No Hits Found pft1c/pft1c.pk003.f7 chr9:3328654-3333654 1 1 8
1.1.9 pft1c.pk004.g8 AW355724 No Hits Found Chicken type-1 collagen pro-alpha-1 chain mRNA pft1c/pft1c.pk004.g8 1 1 9
1.1.10 pgf1n.pk001.f17 BI064433 similar to C50D2.7.p [Homo sapiens] No Hits Found Contig_15342.465 pgf1n/pgf1n.pk001.f17 chr1:65109351-65114351 1 1 10
1.1.11 pgf1n.pk001.l7 BI064550 chaperonin containing TCP1, subunit 6A (zeta 1); chaperonin containing T-complex subunit 6 [Homo sap Homo sapiens chaperonin containing TCP1, subunit 6A (zeta 1) (CCT6A), mRNA Contig_3578.6 pgf1n/pgf1n.pk001.l7 chr19:4580057-4585057 1 1 11
1.1.12 pgf1n.pk002.c6 BI064678 RAN binding protein 16 [Homo sapiens] Homo sapiens RAN binding protein 16 mRNA, complete cds Contig_26595.1 pgf1n/pgf1n.pk002.c6 chrUn:9336752-9341752 1 1 12
1.1.13 pft1c.pk002.b3 AW355546 No Hits Found No Hits Found Contig_2494.2 pft1c/pft1c.pk002.b3 chr1:57541832-57546832 1 1 13
1.1.14 pft1c.pk003.f11 AW355639 follicular lymphoma variant translocation 1 [Homo sapiens] Homo sapiens follicular lymphoma variant translocation 1 (FVT1), mRNA Contig_10502.1 pft1c/pft1c.pk003.f11 chr2:67586418-67591418 1 1 14
1.1.15 pft1c.pk004.g11 AW355721 bA517O1.1 (similar to SA2 nuclear protein) [Homo sapiens] Mus musculus stromal antigen 2 (Stag2), mRNA Contig_23526.1 pft1c/pft1c.pk004.g11 chr1:123072395-123077395 1 1 15
1.1.16 pgf1n.pk001.f21 BI064438 hypothetical protein FLJ13910 [Homo sapiens] Homo sapiens hypothetical protein FLJ13910 (FLJ13910), mRNA Contig_10339.1 pgf1n/pgf1n.pk001.f21 chr4:85740572-85745572 1 1 16
1.2.1 pgf1n.pk001.l15 BI064540 unnamed protein product [Mus musculus] No Hits Found Contig_4924.1 pgf1n/pgf1n.pk001.l15 chr11:962564-967564 1 2 1
1.2.2 pgf1n.pk002.c10 BI064663 ELL complex EAP30 subunit [Homo sapiens] Mus musculus DNA segment, Chr 11, KL Mohlke 34 (D11Moh34), mRNA Contig_8398.2 pgf1n/pgf1n.pk002.c10 chr27:2328081-2333081 1 2 2
1.2.3 pft1c.pk002.b6 AW355549 No Hits Found Gallus gallus claudin-5 (cldn5) mRNA, complete cds pft1c/pft1c.pk002.b6 chr15:679824-684824 1 2 3
1.2.4 pft1c.pk003.g5 AW355649 glutamate receptor subunit 5-2 Homo sapiens mRNA for glutamate receptor subunit GluR5 (GRIK1 gene) Contig_2835.11 pft1c/pft1c.pk003.g5 chr1:97926734-97931734 1 2 4

Total number of rows: 7680

Table truncated, full table size 1377 Kbytes.

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Supplementary data files not provided

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