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Platform GPL1742 Query DataSets for GPL1742
Status Public on Dec 11, 2004
Title UD_Liver_3.2K
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Gallus gallus
Description Spotted amplified cDNA array on nylon membrane (8 x 12 cm).
3456 spots
Keywords = spotted
Keywords = cDNA
Web link
Contributor(s) Cogburn LA, Carre W, Wang X
Citation(s) 16554550
Submission date Dec 09, 2004
Last update date Mar 24, 2006
Contact name Larry Albert Cogburn
Phone 302-831-1335
Organization name University of Delaware
Department Animal and Food Sciences
Lab Avian Functional Genomics
Street address 531 South College Ave.
City Newark
State/province DE
ZIP/Postal code 19717
Country USA

Data table header descriptions
GB_ACC GenBank accession number of sequence
BLAST_X First BlastX result
BLAST_N First BlastN result
CAP3_ASSEMBLY Result of CAP3 Assembly
LOCALISATION Localisation of the gene on Chicken Assembly

Data table
1:a1 pgl1c.pk001.a13 BG641472 No Hits Found No Hits Found pgl1c/pgl1c.pk001.a13 chr7:31010095-31015095 1 1 1
2:a1 pgl1c.pk002.f10 BG641860 protein phosphatase 1, regulatory (inhibitor) subunit 3B [Homosapiens] Mus musculus similar to phosphoprotein phosphatase (EC 1 glycogen-binding chain - rat (LOC pgl1c/pgl1c.pk002.f10 chr4:50107751-50112751 1 1 2
3:a1 pgl1n.pk001.d15 BG709731 hypothetical protein FLJ12770 [Homo sapiens] Homo sapiens hypothetical protein FLJ12770 (FLJ12770), mRNA Contig_11950.1 pgl1n/pgl1n.pk001.d15 chrUn:22377029-22382029 1 1 3
4:a1 pgl1n.pk001.o18 BG709942 RIKEN cDNA 2310035O07 [Mus musculus] Homo sapiens phosphatase and tensin homolog (mutated in multiple advanced cancers 1) (PTEN), mRNA Contig_3950.2 pgl1n/pgl1n.pk001.o18 chr6:8897554-8902554 1 1 4
5:a1 pgl1n.pk002.l15 BG713294 PRP18 pre-mRNA processing factor 18 homolog; pre-mRNA splicingfactor similar to S. cerevisiae Prp18; pre-mRNAprocessing factor 18 [Homo sapiens] Mus musculus, Similar to pre-mRNA processing factor 18, cloneIMAGE:3496857, mRNA Contig_21629.1 pgl1n/pgl1n.pk002.l15 chr1:3889870-3894870 1 1 5
6:a1 pgl1n.pk003.f24 BG713429 peroxiredoxin 3; antioxidant protein 1; thioredoxin-dependentperoxide reductase precursor [Homo sapi Bos taurus antioxidant protein and substrate protein formitochondrial ATP-dependent protease mRNA Contig_3284.1 pgl1n/pgl1n.pk003.f24 chr6:29054485-29059485 1 1 6
7:a1 pgl1n.pk004.b13 BG710519 similar to KIAA0532 protein [Homo sapiens] Homo sapiens KIAA0532 protein (KIAA0532), mRNA pgl1n/pgl1n.pk004.b13 chr2:127306923-127311923 1 2 1
8:a1 pgl1n.pk005.a7 BG710772 No Hits Found No Hits Found pgl1n/pgl1n.pk005.a7 chr4:337360-342360 1 2 2
9:a1 pgl1n.pk005.m6 BG710962 TAK1-binding protein 1 [Mus musculus] Homo sapiens, similar to mitogen-activated protein kinase kinase kinase 7 interacting protein 1, clo pgl1n/pgl1n.pk005.m6 chr1:47368015-47373015 1 2 3
10:a1 pgl1n.pk006.g19 BG713620 unnamed protein product [Mus musculus] Oryctolagus cuniculus oncogene rsc mRNA, complete cds Contig_11531.1 pgl1n/pgl1n.pk006.g19 1 2 4
11:a1 pgl1n.pk007.b3 BG711306 Similar to DKFZP586G1722 protein [Homo sapiens] Mus musculus chromosome 3 clone RP24-257C17, complete sequence Contig_7439.1 pgl1n/pgl1n.pk007.b3 chrUn:132659274-132664274 1 2 5
12:a1 pgl1n.pk008.c5 BG711542 aconitase precursor [Gallus gallus] Gallus gallus aconitase precursor (ACO2) gene, complete cds; nuclear gene for mitochondrial product Contig_12143.1 pgl1n/pgl1n.pk008.c5 chr1:46323424-46328424 1 2 6
13:a1 pgl1n.pk009.d18 BG711734 R31546_1 [Homo sapiens] Homo sapiens, Similar to bromodomain containing 4, clone IMAGE:5787152, mRNA Contig_11900.4 pgl1n/pgl1n.pk009.d18 chrUn:123801331-123806331 1 3 1
14:a1 pgl1n.pk010.f1 BG711953 Protein c20orf42 Homo sapiens chromosome 20 open reading frame 42 (C20orf42), mRNA Contig_21676.1 pgl1n/pgl1n.pk010.f1 chr14:16942884-16947884 1 3 2
15:a1 pgl1n.pk011.j5 BG712157 lung cancer candidate [Homo sapiens] Homo sapiens lung cancer candidate (FUS1), mRNA Contig_26664.1 pgl1n/pgl1n.pk011.j5 1 3 3
16:a1 pgl1n.pk012.l7 BG712481 Growth hormone inducible transmembrane protein (Dermal papilla derived protein 2) (My021 protein) (PTD010) Xenopus laevis, Similar to growth hormone inducible transmembraneprotein, clone MGC:52732 IMAGE:4683872, mRNA, completecds Contig_1714.1 pgl1n/pgl1n.pk012.l7 chr6:2564207-2569207 1 3 4
17:a1 pgl1n.pk013.m5 BG712759 aryl hydrocarbon receptor beta chain - rainbow trout No Hits Found pgl1n/pgl1n.pk013.m5 chr7:6466126-6471126 1 3 5
18:a1 pnl1s.pk001.a2 AW198480 No Hits Found No Hits Found pnl1s/pnl1s.pk001.a2 chr8:7000119-7005119 1 3 6
19:a1 pgl1c.pk001.a12 BG641471 No Hits Found No Hits Found pgl1c/pgl1c.pk001.a12 chr1:136983177-136988177 1 4 1
20:a1 pgl1c.pk002.o23 BG642044 unnamed protein product [Mus musculus] Homo sapiens KIAA0820 protein (KIAA0820), mRNA Contig_7848.2 pgl1c/pgl1c.pk002.o23 chr8:4438126-4443126 1 4 2

Total number of rows: 3456

Table truncated, full table size 643 Kbytes.

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Supplementary data files not provided

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