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Platform GPL17462 Query DataSets for GPL17462
Status Public on Jan 13, 2017
Title 121115_Psativum_SB_expr
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Pisum sativum
Manufacturer NimbleGen
Manufacture protocol http://www.nimblegen.com
Support glass
Coating aminosilane
 
Description - 2 oligo/target sequence except for the 323 miRNA which have 1 oligo/sequence - Sens: Reverse (+ Reverse and Forward sens for miRNA)-all probes are triplicate-40795 Unigen including 18 control
 
Web link http://urgv.evry.inra.fr/cgi-bin/projects/CATdb/consult_project.pl?array_type_id=37
Contributor(s) Burstin J, Aubert G, Balzergue S
Submission date Jul 17, 2013
Last update date Jan 13, 2017
Contact name sandrine balzergue
Organization name INRA
Lab IRHS
Street address Rue G. Morel
City Beaucouze
ZIP/Postal code 49000
Country France
 
Samples (96) GSM2459140, GSM2459141, GSM2459142, GSM2459143, GSM2459144, GSM2459145 
Series (3)
GSE93630 12plex_pea_2013_02_f-Water stress and seed filling in pea
GSE97237 12plex_pea_2013_02_g -Water stress and seed filling in pea
GSE109789 reproductive and vegetative leaves-Genopea 3.2

Data table header descriptions
ID Name of probes
SEQUENCE Sequence of probes
NAMESEQ Name of sequence used for design (optional)
START start postion in nameseq (optional)

Data table
ID SEQUENCE NAMESEQ START
XENOTRACK48P01 TAGCGTTGCTTAGGCGTACGCAGTCTGATGCGTCGTTAGCATCGGCAANNNNNNNNNN CROSSHYBE 1
XENOTRACK48P02 CGATGCGACGCGAACTAAGCAGTTCGGCGCAGTCGACTAGTATAACAGNNNNNNNN CROSSHYBE 2
XENOTRACK48P03 GTCGCAACGAGTTAGCGTGATCGACTTGACTGCGTACGCACAGCAATGNNNNNNNNNN CROSSHYBE 3
XENOTRACK48P04 CTGAGCGATACGCGTTAACCAGGCCGGTCGTATCAGATACGCATTCGGNNNNNNN CROSSHYBE 4
XENOTRACK48P05 CATGACACGGAGTAAGCGAGCCTACAGCGAGCATAATGATCGGCTAGCNNNNNNNNNNN CROSSHYBE 5
XENOTRACK48P06 CCTCGTAAGCTTGACGTGCACTCGGTCCGGAATCACGTACGTCGGCTANNNNNN CROSSHYBE 6
XENOTRACK48P07 GCGTATGAATCGCGGATAGGCATGCCGTAAGCGAGCTAGAACGAATGGNNNNNNNNN CROSSHYBE 7
XENOTRACK48P08 CCGCGTGCAATTATCGGAGTCTAGCGGAAGTACACAACTCGGTCGTTGNNNNNN CROSSHYBE 8
XENOTRACK48P09 CCGTTGAGTAACGTCGAGCGTTAGGTCTCAGCGTAAGCGTCGATAACGNNNNN CROSSHYBE 9
XENOTRACK48P10 CGCGCGTGAGTATATATGCACTGCGGCCGTATATTATAAGGCGCCACGNNNNNNNNN CROSSHYBE 10
XENOTRACK48P11 CAAGAGCCGACTATATAAGGCGCGGCGCAGTAGCGTAACCGGTGTATTNNNNNN CROSSHYBE 11
XENOTRACK48P12 GCGCCTAAGCGACGGTATTAGTCATCCATCGTAGTCGATAGGTCGCGANNNNNNNN CROSSHYBE 12
XENOTRACK48P13 CAAGCCGCGAGATAACGGCGATAACCGTATCACAGATCTCGAGTCTGGNNNNNNNN CROSSHYBE 13
XENOTRACK48P14 TAGCGATAGGCGTAGATGGCTTGCCAGCGATACGAGATATCCAAGGCGNNNNNNNNNN CROSSHYBE 14
XENOTRACK48P15 ACCAACTCGGCAATCTAGCTAGCGCTGAGCGTGTAACATAGCGACCGCNNNNNNNNN CROSSHYBE 15
XENOTRACK48P16 CCATGCATAGAGGTTCGCGACATGCATGGCGCGAAGATATACGGTACGNNNNNNNNNN CROSSHYBE 16
XENOTRACK48P17 TCGCTGAAGCAGATAGCTGACGCGCAAGCAAGTACTAAGCGGATCCGGNNNNNNNNNN CROSSHYBE 17
XENOTRACK48P18 GACTACGAGACACGTACTGTACGGGTGTGCGAATAGATCACGCGCGAANNNNNNNN CROSSHYBE 18
XENOTRACK48P19 TTGTTCGGCTAGCACGTTGTACCGACGTCAGAGTACGGTACGCTACGANNNNNN CROSSHYBE 19
XENOTRACK48P20 CAGACATGTCAGATAGGAGCCGTCCGAGATCGCTACGTGGATTCGTAGNNNNNNNNN CROSSHYBE 20

Total number of rows: 81756

Table truncated, full table size 7545 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL17462_121115_Psativum_SB_expr.ndf.gz 15.8 Mb (ftp)(http) NDF

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