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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 23, 2013 |
| Title |
031058-Agilent ATH NAT array |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Arabidopsis thaliana |
| Manufacturer |
Laboratory of Plant Molecular Biology, Rockefeller University; Agilent Technologies |
| Manufacture protocol |
http://www.home.agilent.com/agilent/home.jspx?cc=US&lc=eng
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| Submission date |
Jul 30, 2013 |
| Last update date |
Jul 31, 2013 |
| Contact name |
Huan Wang |
| E-mail(s) |
hwang01@rockefeller.edu
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| Organization name |
The Rockefeller University
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| Lab |
Chua Nam-Hai
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| Street address |
1230 York Avenue
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| City |
New York |
| State/province |
New York |
| ZIP/Postal code |
10065 |
| Country |
USA |
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| Samples (36)
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GSM1198591, GSM1198592, GSM1198593, GSM1198594, GSM1198595, GSM1198596
GSM1198597, GSM1198598, GSM1198599, GSM1198600, GSM1198601, GSM1198602, GSM1198603, GSM1198604, GSM1198605, GSM1198606, GSM1198607, GSM1198608, GSM1198609, GSM1198610, GSM1198611, GSM1198612, GSM1198613, GSM1198614, GSM1198615, GSM1198616, GSM1198617, GSM1198618, GSM1198619, GSM1198620, GSM1198621, GSM1198622, GSM1198623, GSM1198624, GSM1198625, GSM1198626
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| Series (2) |
| GSE49381 |
Expression of Arabidopsis cis-NAT pairs in inflorescences, leaves and roots |
| GSE49382 |
Dynamic changes of Arabidopsis cis-NAT pairs during de-etiolation |
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| Data table header descriptions |
| ID |
probe ID |
| PROBE_ID |
|
| SEQUENCE |
probe sequence |
| ORF |
locus ID for spotted mRNA and long noncoding RNAs |
| COL |
position of probe, column |
| ROW |
position of probe, row |
| Data table |
| ID |
PROBE_ID |
SEQUENCE |
ORF |
COL |
ROW |
| TU00001 |
CUST_15169_PI425632815 |
CAAGAAGGATGTTGCAAACTCTTCGACTCCTAATCAGTCGTTCACTTGATAAATTTATCA |
AT4G18610 |
192 |
322 |
| TU00002 |
CUST_31267_PI425632833 |
AGTTAGAGAGAGCTTCTTCGTCAGTCCACTGTTTGTTTAGCTCTCTGTCTCTTTTTGTTA |
At5TU079630 |
192 |
320 |
| TU00003 |
CUST_8288_PI425632833 |
TTGTTATTAGTACTACTGTTGACAAATCCAGGGGTAGGCATCATCTGGCCGGTATTTCTC |
At1TU110820 |
192 |
318 |
| TU00004 |
CUST_5202_PI425632833 |
GGAAAAGATCATCGACACATGGCTAAAAGTCACATAAAAGTTTCAACACAGTTATCAGAA |
At1TU072570 |
192 |
316 |
| TU00005 |
CUST_1296_PI425632833 |
AATTCTTTAGCAAAGTCTCGCAGGTAAGCAAGAACCTCAGTATGAGCCGGATGTCTTCTC |
At1TU014790 |
192 |
314 |
| TU00006 |
CUST_29112_PI425632833 |
ATTACAAAGCAAGTAATAATATCACTGAGGTGAGCTACGCCACGTTCGTATTGGAGTTTA |
At5TU048840 |
192 |
312 |
| TU00007 |
CUST_3639_PI425632833 |
ACAAAAGATTCTCAAACATCACAGTCCGGTGACCCCAATTTATGTACACTTCAGTTCCCA |
At1TU044160 |
192 |
310 |
| TU00008 |
CUST_11930_PI425632833 |
ACTGTCTGTCGCTAATCTTACCTACCGCATACTCTACTATTTTCTTAAGCCTCTATGTCT |
At2TU055840 |
192 |
308 |
| TU00009 |
CUST_28476_PI425632833 |
CGAACATTTCAAAATTTATTTAGTGGGCCAGTTTTTAACTCCGTTATGGGCCTACACGTA |
At5TU034060 |
192 |
306 |
| TU00010 |
CUST_8418_PI425632815 |
CGGTAAATCCGAGGAAAAAGGAAATTTGAATTCCGTTTGTTGTTGAAATATAGCTCTGAT |
AT2G39000 |
192 |
304 |
| TU00011 |
CUST_18488_PI425632815 |
CAGTAACCAAATGCACCTTATTAGCAAAGAAGTGTGACCATTATCAGATCACAAAACAAT |
AT5G20830 |
192 |
302 |
| TU00012 |
CUST_476_PI425707362 |
GCTGCGTTATGGTCCAATATCTGTCACAATAAGTTTAAAAGAGTTTGAACCAAACTGTTT |
At1TU014570 |
192 |
300 |
| TU00013 |
CUST_7634_PI425632833 |
TGATGAATTCTCTCCGTGAGCTATATTCTCCACTAAAATGTCACCTTGAACTCGTTCCTC |
At1TU102770 |
192 |
298 |
| TU00014 |
CUST_18772_PI425632833 |
AGAAACTATACGGTCTTTGAGTTGTTCAGAGACCAGAAAATAGTCGATCCTCATCCTCTT |
At3TU072780 |
192 |
296 |
| TU00015 |
CUST_6354_PI425632815 |
CCCGAGTAAGTTCTAGTTCACATCACATTATAGTATTCAGGATATGTTTCCTTGTATGTT |
AT2G14510 |
192 |
294 |
| TU00016 |
CUST_10111_PI425632815 |
CCACCGAAGATCATTTCTAAGTTATGACATGTAACGATCTTAATTAGCGATCCAATCTAT |
AT3G13435 |
192 |
292 |
| TU00017 |
CUST_6809_PI425632815 |
CAGGTTCGGTTCTACACTAGTTCTGAATATGCAACTAATCGTAACTTAAACCTTCTTTAA |
AT2G19720 |
192 |
290 |
| TU00018 |
CUST_29281_PI425632833 |
CTATCTGACTTAGTGATCTCTGAAACCTTGCCATCCTCTCTATCCTTTGCTTGAGTTAAA |
At5TU053200 |
192 |
288 |
| TU00019 |
CUST_10111_PI425632833 |
TTTTGAAGAAGTGGATAAAGAGAGCGACGAGACAGGCTATCCCAACCACAAGGAACATAC |
At2TU032990 |
192 |
286 |
| TU00020 |
CUST_11876_PI425632833 |
TAATGGAGAAAGTTGATGTAACCCTCTTCACAAAACCTTTAGATCCATCTTTCCCACCAC |
At2TU055280 |
192 |
284 |
Total number of rows: 61657
Table truncated, full table size 6617 Kbytes.
| Supplementary data files not provided |
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