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Platform GPL17797 Query DataSets for GPL17797
Status Public on Feb 04, 2014
Title Applied Biosystems Human MicroRNA Cards (A+B Cards)
Technology type RT-PCR
Distribution virtual
Organism Homo sapiens
Manufacturer Applied Biosystems
Manufacture protocol see manufacturer's website
 
Description PCR assay
Two array card-set ('Array Card Human A v2.1' and 'Array Card Human B v3.0' )
 
Submission date Oct 21, 2013
Last update date Feb 04, 2014
Contact name Zhen Zhou
E-mail(s) darknesszhou@gmail.com
Organization name Nanjing University
Department School of Lifesciences
Street address 22th,Hankou Road
City Nanjing
State/province Jiangsu
ZIP/Postal code 210093
Country China
 
Samples (58) GSM1245999, GSM1246000, GSM1365992, GSM1365993, GSM1365994, GSM1365995 
Series (4)
GSE51453 Platelet-secreted microRNA-223 promotes endothelial cell apoptosis induced by advanced glycation end products via targeting the insulin-like growth factor 1 receptor
GSE56624 miRNA profiling of Macaca mulatta intact colon samples during acute SIV infection
GSE60773 miRNA profiling of Macaca mulatta intact colon samples during chronic SIV infection

Data table header descriptions
ID
Array Card Name
Assay ID
Assay Name Assay Names based on miRBase v18
miRBase_human_18th
SEQUENCE Target Sequence
Task
miRNA_ID miRBase identifier
SPOT_ID

Data table
ID Array Card Name Assay ID Assay Name miRBase_human_18th SEQUENCE Task miRNA_ID SPOT_ID
1 Human A v2.1 000377 hsa-let-7a hsa-let-7a-5p UGAGGUAGUAGGUUGUAUAGUU Target hsa-let-7a-5p
2 Human A v2.1 000379 hsa-let-7c hsa-let-7c UGAGGUAGUAGGUUGUAUGGUU Target hsa-let-7c
3 Human A v2.1 002283 hsa-let-7d hsa-let-7d-5p AGAGGUAGUAGGUUGCAUAGUU Target hsa-let-7d-5p
4 Human A v2.1 002406 hsa-let-7e hsa-let-7e-5p UGAGGUAGGAGGUUGUAUAGUU Target hsa-let-7e-5p
5 Human A v2.1 000382 hsa-let-7f hsa-let-7f-5p UGAGGUAGUAGAUUGUAUAGUU Target hsa-let-7f-5p
6 Human A v2.1 002282 hsa-let-7g hsa-let-7g-5p UGAGGUAGUAGUUUGUACAGUU Target hsa-let-7g-5p
7 Human A v2.1 002222 hsa-miR-1 hsa-miR-1 UGGAAUGUAAAGAAGUAUGUAU Target hsa-miR-1
8 Human A v2.1 000583 hsa-miR-9 hsa-miR-9-5p UCUUUGGUUAUCUAGCUGUAUGA Target hsa-miR-9-5p
9 Human A v2.1 000387 hsa-miR-10a hsa-miR-10a-5p UACCCUGUAGAUCCGAAUUUGUG Target hsa-miR-10a-5p
10 Human A v2.1 002218 hsa-miR-10b hsa-miR-10b-5p UACCCUGUAGAACCGAAUUUGUG Target hsa-miR-10b-5p
11 Human A v2.1 001973 U6 snRNA U6 snRNA GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUUACUGCCCUCCAUGCCCUGCCCCACAAACGCUCUGAUAACAGUCUGUCCCUGUCUCUCUCCUGCUGCUCCUAUGGAAGCGAAGUUUUCCGCUCCUGCAGAAAGCAAAGUUACGACUCAGAGACGGCUGAGGAUGACAUCAGCGAUGUGCAGGGAACCCAGCGCCUGGAGCUUCGGGAUGACGGGGCCUUCAGCACCCCCACGGGGGGUUCUGACACCCUGGUGGGCACCUCCCUGGACACACCCCCGACCUCCGUGACAGGCACCUCAGAGGAGCAAGUGAGCUGGUGGGGCAGCGGGCAGACGGUCCUGGAGCAGGAAGCGGGCAGUGGGGGUGGCACCCGCCGCCUCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCUGGGGGUGGAGCCGCUGGUGCGGGCAUCUCGAGCUAAUCUGGUGGG Endogenous Control CONTROL
12 Human A v2.1 001973 U6 snRNA U6 snRNA GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUUACUGCCCUCCAUGCCCUGCCCCACAAACGCUCUGAUAACAGUCUGUCCCUGUCUCUCUCCUGCUGCUCCUAUGGAAGCGAAGUUUUCCGCUCCUGCAGAAAGCAAAGUUACGACUCAGAGACGGCUGAGGAUGACAUCAGCGAUGUGCAGGGAACCCAGCGCCUGGAGCUUCGGGAUGACGGGGCCUUCAGCACCCCCACGGGGGGUUCUGACACCCUGGUGGGCACCUCCCUGGACACACCCCCGACCUCCGUGACAGGCACCUCAGAGGAGCAAGUGAGCUGGUGGGGCAGCGGGCAGACGGUCCUGGAGCAGGAAGCGGGCAGUGGGGGUGGCACCCGCCGCCUCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCUGGGGGUGGAGCCGCUGGUGCGGGCAUCUCGAGCUAAUCUGGUGGG Endogenous Control
13 Human A v2.1 000389 hsa-miR-15a hsa-miR-15a-5p UAGCAGCACAUAAUGGUUUGUG Target hsa-miR-15a-5p
14 Human A v2.1 000390 hsa-miR-15b hsa-miR-15b-5p UAGCAGCACAUCAUGGUUUACA Target hsa-miR-15b-5p
15 Human A v2.1 000391 hsa-miR-16 hsa-miR-16-5p UAGCAGCACGUAAAUAUUGGCG Target hsa-miR-16-5p
16 Human A v2.1 002308 hsa-miR-17 hsa-miR-17-5p CAAAGUGCUUACAGUGCAGGUAG Target hsa-miR-17-5p
17 Human A v2.1 002422 hsa-miR-18a hsa-miR-18a-5p UAAGGUGCAUCUAGUGCAGAUAG Target hsa-miR-18a-5p
18 Human A v2.1 002217 hsa-miR-18b hsa-miR-18b-5p UAAGGUGCAUCUAGUGCAGUUAG Target hsa-miR-18b-5p
19 Human A v2.1 000395 hsa-miR-19a hsa-miR-19a-3p UGUGCAAAUCUAUGCAAAACUGA Target hsa-miR-19a-3p
20 Human A v2.1 000396 hsa-miR-19b hsa-miR-19b-3p UGUGCAAAUCCAUGCAAAACUGA Target hsa-miR-19b-3p

Total number of rows: 768

Table truncated, full table size 76 Kbytes.




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