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Status
Public on Feb 04, 2014
Title
Applied Biosystems Human MicroRNA Cards (A+B Cards)
Technology type
RT-PCR
Distribution
virtual
Organism
Homo sapiens
Manufacturer
Applied Biosystems
Manufacture protocol
see manufacturer's website
Description
PCR assay Two array card-set ('Array Card Human A v2.1' and 'Array Card Human B v3.0' )
Submission date
Oct 21, 2013
Last update date
Feb 04, 2014
Contact name
Zhen Zhou
E-mail(s)
darknesszhou@gmail.com
Organization name
Nanjing University
Department
School of Lifesciences
Street address
22th,Hankou Road
City
Nanjing
State/province
Jiangsu
ZIP/Postal code
210093
Country
China
Samples (58)
GSM1245999 , GSM1246000 , GSM1365992 , GSM1365993 , GSM1365994 , GSM1365995
GSM1365996 ,
GSM1365997 ,
GSM1365998 ,
GSM1365999 ,
GSM1366000 ,
GSM1366001 ,
GSM1366002 ,
GSM1366003 ,
GSM1366004 ,
GSM1366005 ,
GSM1366006 ,
GSM1488264 ,
GSM1488265 ,
GSM1488266 ,
GSM1488267 ,
GSM1488268 ,
GSM1488269 ,
GSM1488270 ,
GSM1488271 ,
GSM1488272 ,
GSM1488273 ,
GSM1488274 ,
GSM1488275 ,
GSM1488276 ,
GSM1488277 ,
GSM1488278 ,
GSM1488279 ,
GSM2044674 ,
GSM2044675 ,
GSM2044676 ,
GSM2044677 ,
GSM2044678 ,
GSM2044679 ,
GSM2044680 ,
GSM2044681 ,
GSM2044682 ,
GSM2044683 ,
GSM2044684 ,
GSM2044685 ,
GSM2044686 ,
GSM2044687 ,
GSM2044688 ,
GSM2044689 ,
GSM2044690 ,
GSM2044691 ,
GSM2044692 ,
GSM2044693 ,
GSM2044694 ,
GSM2044695 ,
GSM2044696 ,
GSM2044697 ,
GSM2044698
Series (4)
GSE51453
Platelet-secreted microRNA-223 promotes endothelial cell apoptosis induced by advanced glycation end products via targeting the insulin-like growth factor 1 receptor
GSE56624
miRNA profiling of Macaca mulatta intact colon samples during acute SIV infection
GSE60773
miRNA profiling of Macaca mulatta intact colon samples during chronic SIV infection
GSE77134
miRNA expression changes in small intestinal lamina propria leukocyte samples during the course of SIV infection of rhesus macaques
Data table header descriptions
ID
Array Card Name
Assay ID
Assay Name
Assay Names based on miRBase v18
miRBase_human_18th
SEQUENCE
Target Sequence
Task
miRNA_ID
miRBase identifier
SPOT_ID
Data table
ID
Array Card Name
Assay ID
Assay Name
miRBase_human_18th
SEQUENCE
Task
miRNA_ID
SPOT_ID
1
Human A v2.1
000377
hsa-let-7a
hsa-let-7a-5p
UGAGGUAGUAGGUUGUAUAGUU
Target
hsa-let-7a-5p
2
Human A v2.1
000379
hsa-let-7c
hsa-let-7c
UGAGGUAGUAGGUUGUAUGGUU
Target
hsa-let-7c
3
Human A v2.1
002283
hsa-let-7d
hsa-let-7d-5p
AGAGGUAGUAGGUUGCAUAGUU
Target
hsa-let-7d-5p
4
Human A v2.1
002406
hsa-let-7e
hsa-let-7e-5p
UGAGGUAGGAGGUUGUAUAGUU
Target
hsa-let-7e-5p
5
Human A v2.1
000382
hsa-let-7f
hsa-let-7f-5p
UGAGGUAGUAGAUUGUAUAGUU
Target
hsa-let-7f-5p
6
Human A v2.1
002282
hsa-let-7g
hsa-let-7g-5p
UGAGGUAGUAGUUUGUACAGUU
Target
hsa-let-7g-5p
7
Human A v2.1
002222
hsa-miR-1
hsa-miR-1
UGGAAUGUAAAGAAGUAUGUAU
Target
hsa-miR-1
8
Human A v2.1
000583
hsa-miR-9
hsa-miR-9-5p
UCUUUGGUUAUCUAGCUGUAUGA
Target
hsa-miR-9-5p
9
Human A v2.1
000387
hsa-miR-10a
hsa-miR-10a-5p
UACCCUGUAGAUCCGAAUUUGUG
Target
hsa-miR-10a-5p
10
Human A v2.1
002218
hsa-miR-10b
hsa-miR-10b-5p
UACCCUGUAGAACCGAAUUUGUG
Target
hsa-miR-10b-5p
11
Human A v2.1
001973
U6 snRNA
U6 snRNA
GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUUACUGCCCUCCAUGCCCUGCCCCACAAACGCUCUGAUAACAGUCUGUCCCUGUCUCUCUCCUGCUGCUCCUAUGGAAGCGAAGUUUUCCGCUCCUGCAGAAAGCAAAGUUACGACUCAGAGACGGCUGAGGAUGACAUCAGCGAUGUGCAGGGAACCCAGCGCCUGGAGCUUCGGGAUGACGGGGCCUUCAGCACCCCCACGGGGGGUUCUGACACCCUGGUGGGCACCUCCCUGGACACACCCCCGACCUCCGUGACAGGCACCUCAGAGGAGCAAGUGAGCUGGUGGGGCAGCGGGCAGACGGUCCUGGAGCAGGAAGCGGGCAGUGGGGGUGGCACCCGCCGCCUCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCUGGGGGUGGAGCCGCUGGUGCGGGCAUCUCGAGCUAAUCUGGUGGG
Endogenous Control
CONTROL
12
Human A v2.1
001973
U6 snRNA
U6 snRNA
GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUUACUGCCCUCCAUGCCCUGCCCCACAAACGCUCUGAUAACAGUCUGUCCCUGUCUCUCUCCUGCUGCUCCUAUGGAAGCGAAGUUUUCCGCUCCUGCAGAAAGCAAAGUUACGACUCAGAGACGGCUGAGGAUGACAUCAGCGAUGUGCAGGGAACCCAGCGCCUGGAGCUUCGGGAUGACGGGGCCUUCAGCACCCCCACGGGGGGUUCUGACACCCUGGUGGGCACCUCCCUGGACACACCCCCGACCUCCGUGACAGGCACCUCAGAGGAGCAAGUGAGCUGGUGGGGCAGCGGGCAGACGGUCCUGGAGCAGGAAGCGGGCAGUGGGGGUGGCACCCGCCGCCUCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCUGGGGGUGGAGCCGCUGGUGCGGGCAUCUCGAGCUAAUCUGGUGGG
Endogenous Control
13
Human A v2.1
000389
hsa-miR-15a
hsa-miR-15a-5p
UAGCAGCACAUAAUGGUUUGUG
Target
hsa-miR-15a-5p
14
Human A v2.1
000390
hsa-miR-15b
hsa-miR-15b-5p
UAGCAGCACAUCAUGGUUUACA
Target
hsa-miR-15b-5p
15
Human A v2.1
000391
hsa-miR-16
hsa-miR-16-5p
UAGCAGCACGUAAAUAUUGGCG
Target
hsa-miR-16-5p
16
Human A v2.1
002308
hsa-miR-17
hsa-miR-17-5p
CAAAGUGCUUACAGUGCAGGUAG
Target
hsa-miR-17-5p
17
Human A v2.1
002422
hsa-miR-18a
hsa-miR-18a-5p
UAAGGUGCAUCUAGUGCAGAUAG
Target
hsa-miR-18a-5p
18
Human A v2.1
002217
hsa-miR-18b
hsa-miR-18b-5p
UAAGGUGCAUCUAGUGCAGUUAG
Target
hsa-miR-18b-5p
19
Human A v2.1
000395
hsa-miR-19a
hsa-miR-19a-3p
UGUGCAAAUCUAUGCAAAACUGA
Target
hsa-miR-19a-3p
20
Human A v2.1
000396
hsa-miR-19b
hsa-miR-19b-3p
UGUGCAAAUCCAUGCAAAACUGA
Target
hsa-miR-19b-3p
Total number of rows: 768 Table truncated, full table size 76 Kbytes .
Supplementary data files not provided