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Platform GPL17915 Query DataSets for GPL17915
Status Public on Feb 01, 2014
Title TaqMan® Array Human MicroRNA A Cards v2.0 (catalog# 4398965)
Technology type RT-PCR
Distribution virtual
Organism Homo sapiens
Manufacturer Life Technologies - Applied Biosystems
Manufacture protocol see manufacturer's website
Catalog number 4398965
 
Description The TaqMan® Array Human MicroRNA A Card v2.0 contains 384 TaqMan® MicroRNA Assays enabling accurate quantitation of 377 human microRNAs in as little as 5 hours. Three TaqMan MicroRNA Assay endogenous controls are included to aid in data normalization and one TaqMan® MicroRNA Assay not related to human is included as a negative control. Details on the included assays is available in the Target List file. Purchase of the Megaplex™ RT Primers, Human Pool A v2.1 is required to run this array. An additional preamplification step is enabled by Megaplex™ PreAmp Primers, Human Pool A v2.1 for situations where sensitivity is of the utmost importance and⁄or sample is limiting.
 
Submission date Nov 12, 2013
Last update date Feb 01, 2014
Contact name Beatriz Roson Burgo
Organization name Consejo Superior de Investigaciones Científicas & Universidad de Salamanca
Department Cancer Research Centre
Lab Bioinformatics and functional genomics group
Street address Campus Miguel de Unamuno
City Salamanca
ZIP/Postal code 37007
Country Spain
 
Samples (34) GSM1262596, GSM1262597, GSM1262598, GSM1262599, GSM1262600, GSM1262601 
Series (3)
GSE52295 Bone marrow mesenchymal cells from Myelodisplastic Syndromes release microvesicles that incorporate into CD34+ cells and may modify their behaviour.
GSE145259 Urothelial-to-Neural Lineage Plasticity Drives Progression to Small Cell Bladder Cancer [miRNA]
GSE145261 Urothelial-to-Neural Lineage Plasticity Drives Progression to Small Cell Bladder Cancer

Data table header descriptions
ID
miRNA_Assay_ID Manufacturer-supplied miRNA identifier (miRBase name followed by manufacturer's ID catalog number for individual miRNA RT-qPCR assay)
miRNA_ID miRBase identifier
SPOT_ID

Data table
ID miRNA_Assay_ID miRNA_ID SPOT_ID
1 ath-miR159a-000338 ath-miR159a
2 hsa-let-7a-000377 hsa-let-7a
3 hsa-let-7b-002619 hsa-let-7b
4 hsa-let-7c-000379 hsa-let-7c
5 hsa-let-7d-002283 hsa-let-7d
6 hsa-let-7e-002406 hsa-let-7e
7 hsa-let-7f-000382 hsa-let-7f
8 hsa-let-7g-002282 hsa-let-7g
9 hsa-miR-1-002222 hsa-miR-1
10 hsa-miR-100-000437 hsa-miR-100
11 hsa-miR-101-002253 hsa-miR-101
12 hsa-miR-103-000439 hsa-miR-103
13 hsa-miR-105-002167 hsa-miR-105
14 hsa-miR-106a-002169 hsa-miR-106a
15 hsa-miR-106b-000442 hsa-miR-106b
16 hsa-miR-107-000443 hsa-miR-107
17 hsa-miR-10a-000387 hsa-miR-10a
18 hsa-miR-10b-002218 hsa-miR-10b
19 hsa-miR-122-002245 hsa-miR-122
20 hsa-miR-125a-3p-002199 hsa-miR-125a-3p

Total number of rows: 384

Table truncated, full table size 14 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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