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Platform GPL1793 Query DataSets for GPL1793
Status Public on Jun 01, 2005
Title Rainbow trout sex differentiation cascade-related genes investigated using RT-PCR
Technology type RT-PCR
Distribution virtual
Organism Oncorhynchus mykiss
 
Description Virtual platform listing sex differentiation cascade-related candidate genes investigated using RT-PCR.
 
Submission date Jan 12, 2005
Last update date Jun 01, 2005
Contact name Daniel Baron
E-mail(s) Daniel.Baron@rennes.inra.fr
Phone 33 (0) 2 23 48 57 20
Fax 33 (0) 2 23 48 50 20
URL http://www.rennes.inra.fr/scribe/
Organization name Institut National de la Recherche Agronomique-INRA
Department Station Commune de Recherches en Ichtyophysiologie
Lab Sexualité et reproduction des poissons-SRP
Street address
City Rennes
State/province Brittany
ZIP/Postal code 35042
Country France
 
Samples (28) GSM38861, GSM38862, GSM38863, GSM38864, GSM38865, GSM38866 
Series (1)
GSE2151 Large-scale temporal gene expression profiling during gonadal differentiation and early gametogenesis in rainbow-trout

Data table header descriptions
ID
NAME common gene name
DESC gene description
ALIASES Aliases
SYMBOL Approved gene symbol
GB_ACC GenBank accession
FUNC Molecular function
FOR_SEQ Forward primer sequence
REV_SEQ Reverse primer sequence

Data table
ID NAME DESC ALIASES SYMBOL GB_ACC FUNC FOR_SEQ REV_SEQ
AB006448 SOX9-beta SRY-type HMG box protein 9 beta ; SRY (sex determining region Y)-box 9) SRA1 SOX9 AB006448 Apoptosis regulator ATGCAGGTGCCCAAGGCTCA CTCTGGCTGGGGCTCATATA
AB007906 SOX23 SRY-type HMG box protein 23 AB007906 Apoptosis regulator GGCTCTCTGGGTAAGGAACAGTT GTGGGCATGACTTCGCTGACAGT
AB008798 P62 Nuclear pore complex glycoprotein p62 ; nucleoporin 62kDa p62 NUP62 AB008798 Apoptosis regulator CAGTGACCCGCTTCAGCAGATC AAAGTCTTCTCCTGCTCTTTGC
AB010741 SOX24 SRY-type HMG box protein 24 AB010741 Apoptosis regulator CACAACGGAACATGGTGCAGCAA CAGTCAGCTTTCACGGATTTCAG
AB012095 Ar-alpha Androgen Receptor alpha AIS, NR3C4, SMAX1, HUMARA AR AB012095 Apoptosis regulator CCCTATCCCAACTCACCATGCA GCCACCCTCAAACCTGGCATCTG
AB012096 Ar-beta Androgen Receptor beta AIS, NR3C4, SMAX1, HUMARA AR AB012096 Apoptosis regulator CCCTATCCCAACTCCCCGTACT GCCACCCTCAAACCTGGCATCTG
AB032566 Vas-alpha Dead-Box Protein 4 ; DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 VASA DDX4 AB032566 Apoptosis regulator GGCGTGGCAGCTAGTCAGTTCA GCACACAAGTCCCATGGGCAAA
AB044566 INHA Inhibin alpha INHA AB044566 cell adhesion molecules CCAGCTCTGACTCTACCTGTGAT CCTGGTTGTCGAGGGAGGATT
AB047032 StAR Steroidogenic Acute Regulatory protein STARD1 STAR AB047032 cell adhesion molecules GGAGTTGTTAGGGCAGAGAAC CCAACCCTTTAAATCTATGCTTA
AB050835 FSH-beta Follicle-stimulating hormone beta subunit FSHB AB050835 cell junctions and nucleoporins GCGAAACAACGGACCTGAACTAT GGACCACTCCTTGAAGTTACACA
AB050836 LH-beta Luteinizing hormone beta subunit LHB AB050836 cell junctions and nucleoporins CTGCGTCACCAAGGAGCCGGTTT GACAGTCAGGTAGGCGGATCGTT
AF027130 GAPDH glyceraldehyde-3-phosphate dehydrogenase GAPDH GAPD AF027130 cell junctions and nucleoporins CTGAGTACTCTGTTGTGTCTTC CATTGTCATACCAGGAAATGAG
AF065137 AhRa Aryl hydrocarbon receptor alpha Ah, Ahh, Ahre, dioxin receptor, In AHR AF065137 germ cells proteins and meiosis GAACGCCCCAACCTTCTCCGA ACCACGTCTGACTGATGGAAG
AF156262 MelR Melatonin receptor 1 Mel1a receptor, MelR, MR MTNR1A AF156262 germ cells proteins and meiosis GGGTGCTTCCTGATATTCACTAT AAGATGTTTCCTGCATTCCTTAG
AF179894 11BH1 11-beta-hydroxylase type 1 ; cytochrome P450, family 11, subfamily B, polypeptide 1 P450C11, FHI, CPN1 CYP11B1 AF179894 germ cells proteins and meiosis CTGGGACATGTGTCCAGGCG CTGGATCCTGAAACACATCT
AF209095 DMRT1 Doublesex-and Mab-3-Related Transcription factor 1 DMT1 DMRT1 AF209095 germ cells proteins and meiosis GGACACCTCCTACTACAACTTCT GTTCGGCATCTGGTATTGTTGGT
AF209872 SOX9-alpha SRY-type HMG box protein 9 alpha ; SRY (sex determining region Y)-box 9 SRA1 SOX9 AF209872 germ cells proteins and meiosis CAGCCGGGGGCCAGGGCTCA CTCTGGCTGGGGCTCATGTA
AF212219 CASP6 Caspase6, apoptosis-related cysteine protease MCH2 CASP6 AF212219 germ cells proteins and meiosis CAATGCTGACCGCTCCAATC GCCTCAGCCGCCTGACTGAT
AF217273 11BH2 (11-beta-hydroxylase type 2) 11-beta-hydroxylase type 2 ; cytochrome P450, family 11, subfamily B, polypeptide 1 CYP11BL, CPN2, P-450C18, P450aldo, ALDOS CYP11B2 AF217273 Growth hormones and factors CTGGGACATGTGTCCAGGCA CTGGATCCTGAAACACGTCA
AF231708 VEP-gamma Vitelline envelope protein gamma ZP3-424, ZP3-372, HGNC:13190 ZP3 AF231708 Growth hormones and factors TCTATATTACAAACCCAAACCT CATTGTGTTTCCTTGGATAGTG

Total number of rows: 102

Table truncated, full table size 15 Kbytes.






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